Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm45176-201ENSMUST00000207696 4096 ntBASIC4.12□□□□□ -1.75
Col6a1Q04857 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC4.12□□□□□ -1.75
Col6a1Q04857 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
Col6a1Q04857 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Col6a1Q04857 Gm13504-201ENSMUST00000117490 316 ntBASIC4.12□□□□□ -1.75
Col6a1Q04857 Gm11204-201ENSMUST00000122438 147 ntBASIC4.12□□□□□ -1.75
Col6a1Q04857 Gm25115-201ENSMUST00000157187 140 ntBASIC4.12□□□□□ -1.75
Col6a1Q04857 Gm25860-201ENSMUST00000158252 126 ntBASIC4.12□□□□□ -1.75
Col6a1Q04857 Igkv2-113-201ENSMUST00000196138 362 ntBASIC4.12□□□□□ -1.75
Col6a1Q04857 Gm6796-201ENSMUST00000211919 243 ntBASIC4.12□□□□□ -1.75
Col6a1Q04857 AC166830.2-201ENSMUST00000225821 196 ntBASIC4.12□□□□□ -1.75
Col6a1Q04857 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Col6a1Q04857 Gm26449-201ENSMUST00000082452 104 ntBASIC4.12□□□□□ -1.75
Col6a1Q04857 Mir30e-201ENSMUST00000083475 92 ntBASIC4.12□□□□□ -1.75
Col6a1Q04857 Gm25651-201ENSMUST00000083782 119 ntBASIC4.12□□□□□ -1.75
Col6a1Q04857 Gm43883-201ENSMUST00000204002 3750 ntBASIC4.12□□□□□ -1.75
Col6a1Q04857 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Col6a1Q04857 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
Col6a1Q04857 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Col6a1Q04857 Gm24116-201ENSMUST00000103975 107 ntBASIC4.11□□□□□ -1.75
Col6a1Q04857 Gm22023-201ENSMUST00000104354 130 ntBASIC4.11□□□□□ -1.75
Col6a1Q04857 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC4.11□□□□□ -1.75
Col6a1Q04857 Gm26088-201ENSMUST00000157896 131 ntBASIC4.11□□□□□ -1.75
Col6a1Q04857 Gm25456-201ENSMUST00000157952 109 ntBASIC4.11□□□□□ -1.75
Col6a1Q04857 Nron-204ENSMUST00000158971 370 ntBASIC4.11□□□□□ -1.75
Col6a1Q04857 Gm28010-201ENSMUST00000179485 126 ntBASIC4.11□□□□□ -1.75
Col6a1Q04857 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Col6a1Q04857 Mir465d-201ENSMUST00000196314 58 ntBASIC4.11□□□□□ -1.75
Col6a1Q04857 AC157476.1-201ENSMUST00000215555 169 ntBASIC4.11□□□□□ -1.75
Col6a1Q04857 Gm25205-201ENSMUST00000082841 103 ntBASIC4.11□□□□□ -1.75
Col6a1Q04857 Gm26314-201ENSMUST00000083891 107 ntBASIC4.11□□□□□ -1.75
Col6a1Q04857 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Col6a1Q04857 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Col6a1Q04857 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a1Q04857 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Col6a1Q04857 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC4.1□□□□□ -1.75
Col6a1Q04857 Gm38031-201ENSMUST00000191819 3015 ntBASIC4.1□□□□□ -1.75
Col6a1Q04857 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a1Q04857 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col6a1Q04857 Gm15180-201ENSMUST00000117745 492 ntBASIC4.1□□□□□ -1.75
Col6a1Q04857 Gm22890-201ENSMUST00000158642 144 ntBASIC4.1□□□□□ -1.75
Col6a1Q04857 Gm28755-201ENSMUST00000185773 199 ntBASIC4.1□□□□□ -1.75
Col6a1Q04857 Gm7329-201ENSMUST00000185915 210 ntBASIC4.1□□□□□ -1.75
Col6a1Q04857 Gm28627-201ENSMUST00000186141 453 ntBASIC4.1□□□□□ -1.75
Col6a1Q04857 Mir376a-201ENSMUST00000197584 68 ntBASIC4.1□□□□□ -1.75
Col6a1Q04857 Gm7422-201ENSMUST00000220115 640 ntBASIC4.1□□□□□ -1.75
Col6a1Q04857 AC162934.1-201ENSMUST00000222880 309 ntBASIC4.1□□□□□ -1.75
Col6a1Q04857 AC123533.1-201ENSMUST00000227782 446 ntBASIC4.1□□□□□ -1.75
Col6a1Q04857 Gm9765-201ENSMUST00000043170 321 ntBASIC4.1□□□□□ -1.75
Col6a1Q04857 Gm24152-201ENSMUST00000082764 163 ntBASIC4.1□□□□□ -1.75
Col6a1Q04857 Gm23454-201ENSMUST00000083332 133 ntBASIC4.1□□□□□ -1.75
Col6a1Q04857 Mir302d-201ENSMUST00000083513 66 ntBASIC4.1□□□□□ -1.75
Col6a1Q04857 Gm37941-201ENSMUST00000192170 2309 ntBASIC4.1□□□□□ -1.75
Col6a1Q04857 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Col6a1Q04857 Gm43715-201ENSMUST00000196307 2715 ntBASIC4.09□□□□□ -1.75
Col6a1Q04857 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Col6a1Q04857 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
Col6a1Q04857 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.75
Col6a1Q04857 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
Col6a1Q04857 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Col6a1Q04857 Gm23472-201ENSMUST00000101806 191 ntBASIC4.09□□□□□ -1.75
Col6a1Q04857 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Col6a1Q04857 Gm24061-201ENSMUST00000157489 120 ntBASIC4.09□□□□□ -1.75
Col6a1Q04857 Gm23753-201ENSMUST00000157575 149 ntBASIC4.09□□□□□ -1.75
Col6a1Q04857 Gm23196-201ENSMUST00000158806 107 ntBASIC4.09□□□□□ -1.75
Col6a1Q04857 Gm24497-201ENSMUST00000177868 191 ntBASIC4.09□□□□□ -1.75
Col6a1Q04857 Gm43193-201ENSMUST00000197732 441 ntBASIC4.09□□□□□ -1.75
Col6a1Q04857 Gm19244-201ENSMUST00000204340 253 ntBASIC4.09□□□□□ -1.75
Col6a1Q04857 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC4.09□□□□□ -1.75
Col6a1Q04857 CT030247.1-201ENSMUST00000216810 267 ntBASIC4.09□□□□□ -1.75
Col6a1Q04857 AC192091.2-201ENSMUST00000217869 117 ntBASIC4.09□□□□□ -1.75
Col6a1Q04857 AC165293.1-201ENSMUST00000219669 329 ntBASIC4.09□□□□□ -1.75
Col6a1Q04857 Gm25812-201ENSMUST00000082751 103 ntBASIC4.09□□□□□ -1.75
Col6a1Q04857 Gm23444-201ENSMUST00000082922 191 ntBASIC4.09□□□□□ -1.75
Col6a1Q04857 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
Col6a1Q04857 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Col6a1Q04857 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Col6a1Q04857 AC152159.1-201ENSMUST00000226719 2769 ntBASIC4.08□□□□□ -1.76
Col6a1Q04857 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Col6a1Q04857 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
Col6a1Q04857 Gm12902-201ENSMUST00000118389 322 ntBASIC4.08□□□□□ -1.76
Col6a1Q04857 Gm13314-201ENSMUST00000118742 335 ntBASIC4.08□□□□□ -1.76
Col6a1Q04857 Gm14562-201ENSMUST00000129885 543 ntBASIC4.08□□□□□ -1.76
Col6a1Q04857 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
Col6a1Q04857 Gm23231-201ENSMUST00000157299 104 ntBASIC4.08□□□□□ -1.76
Col6a1Q04857 Gm24138-201ENSMUST00000157572 114 ntBASIC4.08□□□□□ -1.76
Col6a1Q04857 Gm24014-201ENSMUST00000157728 157 ntBASIC4.08□□□□□ -1.76
Col6a1Q04857 Gm22767-201ENSMUST00000158365 165 ntBASIC4.08□□□□□ -1.76
Col6a1Q04857 Gm25369-201ENSMUST00000158848 132 ntBASIC4.08□□□□□ -1.76
Col6a1Q04857 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC4.08□□□□□ -1.76
Col6a1Q04857 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Col6a1Q04857 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Col6a1Q04857 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC4.08□□□□□ -1.76
Col6a1Q04857 Gm42623-201ENSMUST00000197225 379 ntBASIC4.08□□□□□ -1.76
Col6a1Q04857 Mir1a-2-201ENSMUST00000198520 72 ntBASIC4.08□□□□□ -1.76
Col6a1Q04857 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Col6a1Q04857 Gm44519-201ENSMUST00000206486 122 ntBASIC4.08□□□□□ -1.76
Col6a1Q04857 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Col6a1Q04857 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Col6a1Q04857 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms