Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Msx2Q03358 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Msx2Q03358 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC3.62□□□□□ -1.83
Msx2Q03358 Mir6899-201ENSMUST00000184798 64 ntBASIC3.62□□□□□ -1.83
Msx2Q03358 Gm27308-201ENSMUST00000184807 233 ntBASIC3.62□□□□□ -1.83
Msx2Q03358 Gm37923-201ENSMUST00000191624 161 ntBASIC3.62□□□□□ -1.83
Msx2Q03358 Gm40810-201ENSMUST00000219149 253 ntBASIC3.62□□□□□ -1.83
Msx2Q03358 CT025689.3-201ENSMUST00000223817 301 ntBASIC3.62□□□□□ -1.83
Msx2Q03358 AC173482.1-201ENSMUST00000224494 3815 ntBASIC3.62□□□□□ -1.83
Msx2Q03358 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Msx2Q03358 Gm24966-201ENSMUST00000082443 79 ntBASIC3.62□□□□□ -1.83
Msx2Q03358 Gm23722-201ENSMUST00000083002 130 ntBASIC3.62□□□□□ -1.83
Msx2Q03358 n-R5s85-201ENSMUST00000083453 113 ntBASIC3.62□□□□□ -1.83
Msx2Q03358 Gm10351-201ENSMUST00000087694 125 ntBASIC3.62□□□□□ -1.83
Msx2Q03358 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Msx2Q03358 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Msx2Q03358 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
Msx2Q03358 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Msx2Q03358 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
Msx2Q03358 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Msx2Q03358 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Msx2Q03358 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Msx2Q03358 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Msx2Q03358 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Msx2Q03358 Gm24125-201ENSMUST00000104105 137 ntBASIC3.61□□□□□ -1.83
Msx2Q03358 Gm23586-201ENSMUST00000157657 123 ntBASIC3.61□□□□□ -1.83
Msx2Q03358 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Msx2Q03358 Gm26097-201ENSMUST00000179642 93 ntBASIC3.61□□□□□ -1.83
Msx2Q03358 Gm27580-201ENSMUST00000183666 149 ntBASIC3.61□□□□□ -1.83
Msx2Q03358 Gm27520-201ENSMUST00000184872 81 ntBASIC3.61□□□□□ -1.83
Msx2Q03358 Gm29574-201ENSMUST00000186226 696 ntBASIC3.61□□□□□ -1.83
Msx2Q03358 Gm18982-201ENSMUST00000198118 529 ntBASIC3.61□□□□□ -1.83
Msx2Q03358 Gm9377-201ENSMUST00000207227 623 ntBASIC3.61□□□□□ -1.83
Msx2Q03358 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Msx2Q03358 Gm25987-201ENSMUST00000083234 107 ntBASIC3.61□□□□□ -1.83
Msx2Q03358 Gm24616-201ENSMUST00000083274 139 ntBASIC3.61□□□□□ -1.83
Msx2Q03358 Gm23453-201ENSMUST00000083326 106 ntBASIC3.61□□□□□ -1.83
Msx2Q03358 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Msx2Q03358 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.61□□□□□ -1.83
Msx2Q03358 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Msx2Q03358 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Msx2Q03358 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Msx2Q03358 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.6□□□□□ -1.83
Msx2Q03358 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Msx2Q03358 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Msx2Q03358 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC3.6□□□□□ -1.83
Msx2Q03358 Gm15497-201ENSMUST00000119137 551 ntBASIC3.6□□□□□ -1.83
Msx2Q03358 Gm25177-201ENSMUST00000122634 117 ntBASIC3.6□□□□□ -1.83
Msx2Q03358 Gm25427-201ENSMUST00000157605 103 ntBASIC3.6□□□□□ -1.83
Msx2Q03358 Gm16162-201ENSMUST00000162296 297 ntBASIC3.6□□□□□ -1.83
Msx2Q03358 Gm23152-201ENSMUST00000175322 116 ntBASIC3.6□□□□□ -1.83
Msx2Q03358 Gm22699-201ENSMUST00000175376 105 ntBASIC3.6□□□□□ -1.83
Msx2Q03358 Gm28267-201ENSMUST00000191093 265 ntBASIC3.6□□□□□ -1.83
Msx2Q03358 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC3.6□□□□□ -1.83
Msx2Q03358 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Msx2Q03358 AC165106.2-201ENSMUST00000226749 97 ntBASIC3.6□□□□□ -1.83
Msx2Q03358 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Msx2Q03358 Mir34b-201ENSMUST00000083558 84 ntBASIC3.6□□□□□ -1.83
Msx2Q03358 Gm26166-201ENSMUST00000083788 107 ntBASIC3.6□□□□□ -1.83
Msx2Q03358 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Msx2Q03358 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Msx2Q03358 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Msx2Q03358 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Msx2Q03358 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
Msx2Q03358 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Msx2Q03358 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Msx2Q03358 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Msx2Q03358 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Msx2Q03358 Gm25543-201ENSMUST00000122678 312 ntBASIC3.59□□□□□ -1.83
Msx2Q03358 Gm23906-201ENSMUST00000157573 128 ntBASIC3.59□□□□□ -1.83
Msx2Q03358 Gm22789-201ENSMUST00000157884 130 ntBASIC3.59□□□□□ -1.83
Msx2Q03358 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC3.59□□□□□ -1.83
Msx2Q03358 Gm16404-201ENSMUST00000177739 468 ntBASIC3.59□□□□□ -1.83
Msx2Q03358 Gm6660-201ENSMUST00000179149 468 ntBASIC3.59□□□□□ -1.83
Msx2Q03358 Gm14598-201ENSMUST00000180109 468 ntBASIC3.59□□□□□ -1.83
Msx2Q03358 Gm14625-201ENSMUST00000180231 468 ntBASIC3.59□□□□□ -1.83
Msx2Q03358 Gm27220-201ENSMUST00000183453 262 ntBASIC3.59□□□□□ -1.83
Msx2Q03358 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC3.59□□□□□ -1.83
Msx2Q03358 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
Msx2Q03358 Gm22620-201ENSMUST00000082700 133 ntBASIC3.59□□□□□ -1.83
Msx2Q03358 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.59□□□□□ -1.83
Msx2Q03358 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
Msx2Q03358 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Msx2Q03358 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.58□□□□□ -1.84
Msx2Q03358 Gm26293-201ENSMUST00000104170 84 ntBASIC3.58□□□□□ -1.84
Msx2Q03358 Gm12884-201ENSMUST00000120371 325 ntBASIC3.58□□□□□ -1.84
Msx2Q03358 Gm14069-201ENSMUST00000120815 229 ntBASIC3.58□□□□□ -1.84
Msx2Q03358 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.58□□□□□ -1.84
Msx2Q03358 Gm23123-201ENSMUST00000157648 144 ntBASIC3.58□□□□□ -1.84
Msx2Q03358 Gm24727-201ENSMUST00000158231 144 ntBASIC3.58□□□□□ -1.84
Msx2Q03358 Gm23257-201ENSMUST00000158322 132 ntBASIC3.58□□□□□ -1.84
Msx2Q03358 Gm25369-201ENSMUST00000158848 132 ntBASIC3.58□□□□□ -1.84
Msx2Q03358 Gm24086-201ENSMUST00000175171 98 ntBASIC3.58□□□□□ -1.84
Msx2Q03358 Gm27445-201ENSMUST00000184484 72 ntBASIC3.58□□□□□ -1.84
Msx2Q03358 Mir6933-201ENSMUST00000184982 81 ntBASIC3.58□□□□□ -1.84
Msx2Q03358 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC3.58□□□□□ -1.84
Msx2Q03358 Ighv15-1-201ENSMUST00000194450 276 ntBASIC3.58□□□□□ -1.84
Msx2Q03358 Gm37796-201ENSMUST00000195327 134 ntBASIC3.58□□□□□ -1.84
Msx2Q03358 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.58□□□□□ -1.84
Msx2Q03358 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms