Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm22285-201ENSMUST00000178576 94 ntBASIC2.66□□□□□ -1.98
NcanP55066 Gm22417-201ENSMUST00000178656 94 ntBASIC2.66□□□□□ -1.98
NcanP55066 Snord116l2-201ENSMUST00000178675 94 ntBASIC2.66□□□□□ -1.98
NcanP55066 Gm26270-201ENSMUST00000178690 94 ntBASIC2.66□□□□□ -1.98
NcanP55066 Snord116l16-201ENSMUST00000178777 94 ntBASIC2.66□□□□□ -1.98
NcanP55066 Gm23313-201ENSMUST00000178931 94 ntBASIC2.66□□□□□ -1.98
NcanP55066 Snord116l17-201ENSMUST00000178936 94 ntBASIC2.66□□□□□ -1.98
NcanP55066 Gm23089-201ENSMUST00000178947 94 ntBASIC2.66□□□□□ -1.98
NcanP55066 Snord116l10-201ENSMUST00000179053 94 ntBASIC2.66□□□□□ -1.98
NcanP55066 Gm24153-201ENSMUST00000179280 94 ntBASIC2.66□□□□□ -1.98
NcanP55066 Gm25597-201ENSMUST00000179388 94 ntBASIC2.66□□□□□ -1.98
NcanP55066 Snord116l1-201ENSMUST00000179518 94 ntBASIC2.66□□□□□ -1.98
NcanP55066 Gm25816-201ENSMUST00000179764 94 ntBASIC2.66□□□□□ -1.98
NcanP55066 Snord116l8-201ENSMUST00000179889 94 ntBASIC2.66□□□□□ -1.98
NcanP55066 Snord116l7-201ENSMUST00000179895 94 ntBASIC2.66□□□□□ -1.98
NcanP55066 Snord116l5-201ENSMUST00000179927 94 ntBASIC2.66□□□□□ -1.98
NcanP55066 Snord116l6-201ENSMUST00000179955 94 ntBASIC2.66□□□□□ -1.98
NcanP55066 Gm26188-201ENSMUST00000179963 94 ntBASIC2.66□□□□□ -1.98
NcanP55066 Gm26433-201ENSMUST00000180227 94 ntBASIC2.66□□□□□ -1.98
NcanP55066 Snord116l11-201ENSMUST00000180312 94 ntBASIC2.66□□□□□ -1.98
NcanP55066 Gm23862-201ENSMUST00000180342 94 ntBASIC2.66□□□□□ -1.98
NcanP55066 Gm22128-201ENSMUST00000180346 94 ntBASIC2.66□□□□□ -1.98
NcanP55066 Gm38167-201ENSMUST00000195704 1178 ntBASIC2.66□□□□□ -1.98
NcanP55066 Gm43393-201ENSMUST00000200147 194 ntBASIC2.66□□□□□ -1.98
NcanP55066 Gm5001-201ENSMUST00000204361 331 ntBASIC2.66□□□□□ -1.98
NcanP55066 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.66□□□□□ -1.98
NcanP55066 AC124346.1-201ENSMUST00000218539 364 ntBASIC2.66□□□□□ -1.98
NcanP55066 Gm19326-201ENSMUST00000219818 326 ntBASIC2.66□□□□□ -1.98
NcanP55066 AC116589.3-202ENSMUST00000221770 649 ntBASIC2.66□□□□□ -1.98
NcanP55066 AC116589.6-201ENSMUST00000222252 649 ntBASIC2.66□□□□□ -1.98
NcanP55066 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC2.66□□□□□ -1.98
NcanP55066 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
NcanP55066 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
NcanP55066 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
NcanP55066 Gm23422-201ENSMUST00000102000 107 ntBASIC2.65□□□□□ -1.99
NcanP55066 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
NcanP55066 Gm13085-201ENSMUST00000118356 171 ntBASIC2.65□□□□□ -1.99
NcanP55066 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC2.65□□□□□ -1.99
NcanP55066 Gm22330-201ENSMUST00000158068 115 ntBASIC2.65□□□□□ -1.99
NcanP55066 Gm24394-201ENSMUST00000158141 123 ntBASIC2.65□□□□□ -1.99
NcanP55066 Gm24418-201ENSMUST00000177597 79 ntBASIC2.65□□□□□ -1.99
NcanP55066 Gm24639-201ENSMUST00000178518 79 ntBASIC2.65□□□□□ -1.99
NcanP55066 Gm24168-201ENSMUST00000178825 107 ntBASIC2.65□□□□□ -1.99
NcanP55066 Gm23076-201ENSMUST00000179082 79 ntBASIC2.65□□□□□ -1.99
NcanP55066 Gm25077-201ENSMUST00000179157 79 ntBASIC2.65□□□□□ -1.99
NcanP55066 Gm27385-201ENSMUST00000184747 104 ntBASIC2.65□□□□□ -1.99
NcanP55066 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC2.65□□□□□ -1.99
NcanP55066 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC2.65□□□□□ -1.99
NcanP55066 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC2.65□□□□□ -1.99
NcanP55066 CT009713.9-201ENSMUST00000223604 389 ntBASIC2.65□□□□□ -1.99
NcanP55066 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC2.65□□□□□ -1.99
NcanP55066 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.65□□□□□ -1.99
NcanP55066 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.65□□□□□ -1.99
NcanP55066 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
NcanP55066 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.64□□□□□ -1.99
NcanP55066 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC2.64□□□□□ -1.99
NcanP55066 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
NcanP55066 Gm22656-201ENSMUST00000104199 171 ntBASIC2.64□□□□□ -1.99
NcanP55066 Gm42606-201ENSMUST00000114209 239 ntBASIC2.64□□□□□ -1.99
NcanP55066 Gm14355-201ENSMUST00000117352 264 ntBASIC2.64□□□□□ -1.99
NcanP55066 Gm15282-201ENSMUST00000117707 300 ntBASIC2.64□□□□□ -1.99
NcanP55066 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC2.64□□□□□ -1.99
NcanP55066 Gm26414-201ENSMUST00000157674 269 ntBASIC2.64□□□□□ -1.99
NcanP55066 Gm23704-201ENSMUST00000158844 340 ntBASIC2.64□□□□□ -1.99
NcanP55066 Gm22853-201ENSMUST00000174974 131 ntBASIC2.64□□□□□ -1.99
NcanP55066 Gm22192-201ENSMUST00000175128 85 ntBASIC2.64□□□□□ -1.99
NcanP55066 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
NcanP55066 Gm21737-201ENSMUST00000178112 664 ntBASIC2.64□□□□□ -1.99
NcanP55066 Gm20874-201ENSMUST00000178356 663 ntBASIC2.64□□□□□ -1.99
NcanP55066 Gm21744-201ENSMUST00000178403 662 ntBASIC2.64□□□□□ -1.99
NcanP55066 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
NcanP55066 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
NcanP55066 Gm20901-201ENSMUST00000180177 664 ntBASIC2.64□□□□□ -1.99
NcanP55066 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC2.64□□□□□ -1.99
NcanP55066 Gm27527-201ENSMUST00000183903 99 ntBASIC2.64□□□□□ -1.99
NcanP55066 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC2.64□□□□□ -1.99
NcanP55066 Gm28090-201ENSMUST00000189458 664 ntBASIC2.64□□□□□ -1.99
NcanP55066 Gm21647-201ENSMUST00000189755 664 ntBASIC2.64□□□□□ -1.99
NcanP55066 Gm29657-201ENSMUST00000189807 342 ntBASIC2.64□□□□□ -1.99
NcanP55066 Gm43402-201ENSMUST00000197159 159 ntBASIC2.64□□□□□ -1.99
NcanP55066 AL590614.1-201ENSMUST00000226037 268 ntBASIC2.64□□□□□ -1.99
NcanP55066 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
NcanP55066 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
NcanP55066 Gm23515-201ENSMUST00000082829 107 ntBASIC2.64□□□□□ -1.99
NcanP55066 Gm25632-201ENSMUST00000083112 85 ntBASIC2.64□□□□□ -1.99
NcanP55066 Mir448-201ENSMUST00000083516 112 ntBASIC2.64□□□□□ -1.99
NcanP55066 Mir181a-1-201ENSMUST00000083631 87 ntBASIC2.64□□□□□ -1.99
NcanP55066 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
NcanP55066 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
NcanP55066 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
NcanP55066 Mir687-201ENSMUST00000102166 89 ntBASIC2.63□□□□□ -1.99
NcanP55066 Gm11386-201ENSMUST00000117761 347 ntBASIC2.63□□□□□ -1.99
NcanP55066 Gm14020-201ENSMUST00000118165 662 ntBASIC2.63□□□□□ -1.99
NcanP55066 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.63□□□□□ -1.99
NcanP55066 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.63□□□□□ -1.99
NcanP55066 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
NcanP55066 Gm8114-201ENSMUST00000172225 484 ntBASIC2.63□□□□□ -1.99
NcanP55066 Gm5967-201ENSMUST00000172723 494 ntBASIC2.63□□□□□ -1.99
NcanP55066 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC2.63□□□□□ -1.99
NcanP55066 Gm27796-201ENSMUST00000183863 261 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 124.3 ms