Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Gm23226-201ENSMUST00000116927 103 ntBASIC3.92□□□□□ -1.78
Hoxd9P28357 Gm15067-201ENSMUST00000119534 156 ntBASIC3.92□□□□□ -1.78
Hoxd9P28357 Gm25177-201ENSMUST00000122634 117 ntBASIC3.92□□□□□ -1.78
Hoxd9P28357 Gm25748-201ENSMUST00000175487 70 ntBASIC3.92□□□□□ -1.78
Hoxd9P28357 Gm23215-201ENSMUST00000178153 121 ntBASIC3.92□□□□□ -1.78
Hoxd9P28357 Snord50b-201ENSMUST00000178497 72 ntBASIC3.92□□□□□ -1.78
Hoxd9P28357 Gm38332-201ENSMUST00000194189 147 ntBASIC3.92□□□□□ -1.78
Hoxd9P28357 Gm44354-201ENSMUST00000196017 143 ntBASIC3.92□□□□□ -1.78
Hoxd9P28357 Gm44030-201ENSMUST00000204865 432 ntBASIC3.92□□□□□ -1.78
Hoxd9P28357 Snord21-201ENSMUST00000082519 94 ntBASIC3.92□□□□□ -1.78
Hoxd9P28357 Gm22620-201ENSMUST00000082700 133 ntBASIC3.92□□□□□ -1.78
Hoxd9P28357 Gm22683-201ENSMUST00000082854 137 ntBASIC3.92□□□□□ -1.78
Hoxd9P28357 Gm23453-201ENSMUST00000083326 106 ntBASIC3.92□□□□□ -1.78
Hoxd9P28357 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC3.92□□□□□ -1.78
Hoxd9P28357 n-R5s151-201ENSMUST00000083959 119 ntBASIC3.92□□□□□ -1.78
Hoxd9P28357 Gm24163-201ENSMUST00000093660 132 ntBASIC3.92□□□□□ -1.78
Hoxd9P28357 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
Hoxd9P28357 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Hoxd9P28357 Gm44434-201ENSMUST00000203918 3745 ntBASIC3.92□□□□□ -1.78
Hoxd9P28357 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC3.92□□□□□ -1.78
Hoxd9P28357 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Hoxd9P28357 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
Hoxd9P28357 Gm7452-202ENSMUST00000202891 3039 ntBASIC3.91□□□□□ -1.78
Hoxd9P28357 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Hoxd9P28357 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Hoxd9P28357 Gm8666-201ENSMUST00000117517 292 ntBASIC3.91□□□□□ -1.78
Hoxd9P28357 Gm12173-201ENSMUST00000117622 273 ntBASIC3.91□□□□□ -1.78
Hoxd9P28357 Gm15613-201ENSMUST00000118396 326 ntBASIC3.91□□□□□ -1.78
Hoxd9P28357 Gm6952-201ENSMUST00000118629 159 ntBASIC3.91□□□□□ -1.78
Hoxd9P28357 Gm12252-201ENSMUST00000119517 219 ntBASIC3.91□□□□□ -1.78
Hoxd9P28357 Gm13443-201ENSMUST00000120770 555 ntBASIC3.91□□□□□ -1.78
Hoxd9P28357 Gm12071-201ENSMUST00000121968 469 ntBASIC3.91□□□□□ -1.78
Hoxd9P28357 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Hoxd9P28357 Gm22204-201ENSMUST00000122654 327 ntBASIC3.91□□□□□ -1.78
Hoxd9P28357 Gm26187-201ENSMUST00000157693 101 ntBASIC3.91□□□□□ -1.78
Hoxd9P28357 Gm23554-201ENSMUST00000157818 110 ntBASIC3.91□□□□□ -1.78
Hoxd9P28357 Gm22075-201ENSMUST00000158599 192 ntBASIC3.91□□□□□ -1.78
Hoxd9P28357 Gm22665-201ENSMUST00000158720 275 ntBASIC3.91□□□□□ -1.78
Hoxd9P28357 Gm22135-201ENSMUST00000158752 108 ntBASIC3.91□□□□□ -1.78
Hoxd9P28357 Mir6938-201ENSMUST00000184173 63 ntBASIC3.91□□□□□ -1.78
Hoxd9P28357 Gm27477-201ENSMUST00000184649 143 ntBASIC3.91□□□□□ -1.78
Hoxd9P28357 Gm19503-201ENSMUST00000187109 241 ntBASIC3.91□□□□□ -1.78
Hoxd9P28357 Gm28314-201ENSMUST00000191276 345 ntBASIC3.91□□□□□ -1.78
Hoxd9P28357 Gm7449-201ENSMUST00000194393 663 ntBASIC3.91□□□□□ -1.78
Hoxd9P28357 Gm43604-201ENSMUST00000199799 705 ntBASIC3.91□□□□□ -1.78
Hoxd9P28357 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC3.91□□□□□ -1.78
Hoxd9P28357 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC3.91□□□□□ -1.78
Hoxd9P28357 Gm23303-201ENSMUST00000082714 152 ntBASIC3.91□□□□□ -1.78
Hoxd9P28357 Mir193a-201ENSMUST00000083461 66 ntBASIC3.91□□□□□ -1.78
Hoxd9P28357 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.91□□□□□ -1.78
Hoxd9P28357 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Hoxd9P28357 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Hoxd9P28357 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
Hoxd9P28357 Gm43508-201ENSMUST00000197251 3783 ntBASIC3.9□□□□□ -1.78
Hoxd9P28357 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.9□□□□□ -1.78
Hoxd9P28357 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
Hoxd9P28357 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Hoxd9P28357 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Hoxd9P28357 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Hoxd9P28357 Gm16186-201ENSMUST00000120132 216 ntBASIC3.9□□□□□ -1.79
Hoxd9P28357 Gm12723-201ENSMUST00000120700 451 ntBASIC3.9□□□□□ -1.79
Hoxd9P28357 Gm5963-201ENSMUST00000143451 236 ntBASIC3.9□□□□□ -1.79
Hoxd9P28357 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.9□□□□□ -1.79
Hoxd9P28357 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC3.9□□□□□ -1.79
Hoxd9P28357 Gm26104-201ENSMUST00000157250 108 ntBASIC3.9□□□□□ -1.79
Hoxd9P28357 Gm22316-201ENSMUST00000158012 216 ntBASIC3.9□□□□□ -1.79
Hoxd9P28357 Gm22983-201ENSMUST00000158308 104 ntBASIC3.9□□□□□ -1.79
Hoxd9P28357 Gm24877-201ENSMUST00000158779 116 ntBASIC3.9□□□□□ -1.79
Hoxd9P28357 Mir5098-201ENSMUST00000175320 82 ntBASIC3.9□□□□□ -1.79
Hoxd9P28357 Gm25646-201ENSMUST00000178527 79 ntBASIC3.9□□□□□ -1.79
Hoxd9P28357 Gm17067-202ENSMUST00000180131 123 ntBASIC3.9□□□□□ -1.79
Hoxd9P28357 Gm27695-201ENSMUST00000184301 91 ntBASIC3.9□□□□□ -1.79
Hoxd9P28357 Gm28159-201ENSMUST00000190296 696 ntBASIC3.9□□□□□ -1.79
Hoxd9P28357 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hoxd9P28357 Gm8790-201ENSMUST00000194108 322 ntBASIC3.9□□□□□ -1.79
Hoxd9P28357 Mir7657-201ENSMUST00000196051 57 ntBASIC3.9□□□□□ -1.79
Hoxd9P28357 Gm44352-201ENSMUST00000196358 110 ntBASIC3.9□□□□□ -1.79
Hoxd9P28357 Gm43814-201ENSMUST00000197851 413 ntBASIC3.9□□□□□ -1.79
Hoxd9P28357 Gm18982-201ENSMUST00000198118 529 ntBASIC3.9□□□□□ -1.79
Hoxd9P28357 AC158523.1-201ENSMUST00000221398 328 ntBASIC3.9□□□□□ -1.79
Hoxd9P28357 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.9□□□□□ -1.79
Hoxd9P28357 Gm22970-201ENSMUST00000083304 186 ntBASIC3.9□□□□□ -1.79
Hoxd9P28357 Gm26166-201ENSMUST00000083788 107 ntBASIC3.9□□□□□ -1.79
Hoxd9P28357 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC3.9□□□□□ -1.79
Hoxd9P28357 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.9□□□□□ -1.79
Hoxd9P28357 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Hoxd9P28357 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Hoxd9P28357 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Hoxd9P28357 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.89□□□□□ -1.79
Hoxd9P28357 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
Hoxd9P28357 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Hoxd9P28357 Gm12449-201ENSMUST00000117572 234 ntBASIC3.89□□□□□ -1.79
Hoxd9P28357 Gm13687-201ENSMUST00000119857 282 ntBASIC3.89□□□□□ -1.79
Hoxd9P28357 Gm14593-201ENSMUST00000119948 294 ntBASIC3.89□□□□□ -1.79
Hoxd9P28357 Gm14215-201ENSMUST00000120578 221 ntBASIC3.89□□□□□ -1.79
Hoxd9P28357 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.89□□□□□ -1.79
Hoxd9P28357 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC3.89□□□□□ -1.79
Hoxd9P28357 Gm25386-201ENSMUST00000157814 288 ntBASIC3.89□□□□□ -1.79
Hoxd9P28357 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC3.89□□□□□ -1.79
Hoxd9P28357 Mir7658-201ENSMUST00000184043 57 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms