Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC1.83□□□□□ -2.12
P20040 Gm13409-201ENSMUST00000122072 546 ntBASIC1.83□□□□□ -2.12
P20040 Gm23212-201ENSMUST00000122718 60 ntBASIC1.83□□□□□ -2.12
P20040 Gm22227-201ENSMUST00000157356 259 ntBASIC1.83□□□□□ -2.12
P20040 Gm24010-201ENSMUST00000157731 282 ntBASIC1.83□□□□□ -2.12
P20040 Gm24770-201ENSMUST00000158505 92 ntBASIC1.83□□□□□ -2.12
P20040 Gm25368-201ENSMUST00000158847 131 ntBASIC1.83□□□□□ -2.12
P20040 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC1.83□□□□□ -2.12
P20040 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
P20040 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC1.83□□□□□ -2.12
P20040 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC1.83□□□□□ -2.12
P20040 Gm28404-201ENSMUST00000190242 453 ntBASIC1.83□□□□□ -2.12
P20040 AC141895.1-201ENSMUST00000218141 273 ntBASIC1.83□□□□□ -2.12
P20040 AC154521.1-201ENSMUST00000222635 330 ntBASIC1.83□□□□□ -2.12
P20040 Gm26328-201ENSMUST00000082821 107 ntBASIC1.83□□□□□ -2.12
P20040 Gm25794-201ENSMUST00000083286 107 ntBASIC1.83□□□□□ -2.12
P20040 Gm23093-201ENSMUST00000083450 102 ntBASIC1.83□□□□□ -2.12
P20040 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
P20040 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
P20040 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
P20040 Gm12941-201ENSMUST00000117934 220 ntBASIC1.82□□□□□ -2.12
P20040 Gm12646-201ENSMUST00000119144 238 ntBASIC1.82□□□□□ -2.12
P20040 Gm22037-201ENSMUST00000157280 296 ntBASIC1.82□□□□□ -2.12
P20040 Gm23381-201ENSMUST00000157676 94 ntBASIC1.82□□□□□ -2.12
P20040 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC1.82□□□□□ -2.12
P20040 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
P20040 Gm27959-201ENSMUST00000185172 111 ntBASIC1.82□□□□□ -2.12
P20040 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC1.82□□□□□ -2.12
P20040 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC1.82□□□□□ -2.12
P20040 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
P20040 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC1.82□□□□□ -2.12
P20040 Gm18296-201ENSMUST00000192475 783 ntBASIC1.82□□□□□ -2.12
P20040 Gm42672-201ENSMUST00000197821 352 ntBASIC1.82□□□□□ -2.12
P20040 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC1.82□□□□□ -2.12
P20040 AC124542.1-201ENSMUST00000205588 908 ntBASIC1.82□□□□□ -2.12
P20040 AC153141.1-201ENSMUST00000218636 501 ntBASIC1.82□□□□□ -2.12
P20040 Gm35558-203ENSMUST00000222264 204 ntBASIC1.82□□□□□ -2.12
P20040 AC124569.4-201ENSMUST00000223830 1220 ntBASIC1.82□□□□□ -2.12
P20040 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
P20040 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
P20040 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
P20040 Gm8858-201ENSMUST00000118259 342 ntBASIC1.81□□□□□ -2.12
P20040 Gm14215-201ENSMUST00000120578 221 ntBASIC1.81□□□□□ -2.12
P20040 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.81□□□□□ -2.12
P20040 Gm23829-201ENSMUST00000157392 270 ntBASIC1.81□□□□□ -2.12
P20040 Gm24237-201ENSMUST00000157790 132 ntBASIC1.81□□□□□ -2.12
P20040 Gm25711-201ENSMUST00000158633 128 ntBASIC1.81□□□□□ -2.12
P20040 Gm22666-201ENSMUST00000158717 164 ntBASIC1.81□□□□□ -2.12
P20040 Gm24418-201ENSMUST00000177597 79 ntBASIC1.81□□□□□ -2.12
P20040 Gm25020-201ENSMUST00000178071 107 ntBASIC1.81□□□□□ -2.12
P20040 Gm21827-201ENSMUST00000178247 423 ntBASIC1.81□□□□□ -2.12
P20040 Gm24639-201ENSMUST00000178518 79 ntBASIC1.81□□□□□ -2.12
P20040 Gm23076-201ENSMUST00000179082 79 ntBASIC1.81□□□□□ -2.12
P20040 Gm24862-201ENSMUST00000179103 79 ntBASIC1.81□□□□□ -2.12
P20040 Gm23310-201ENSMUST00000179105 79 ntBASIC1.81□□□□□ -2.12
P20040 Gm25077-201ENSMUST00000179157 79 ntBASIC1.81□□□□□ -2.12
P20040 Gm25461-201ENSMUST00000179293 79 ntBASIC1.81□□□□□ -2.12
P20040 Gm21978-201ENSMUST00000179696 377 ntBASIC1.81□□□□□ -2.12
P20040 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC1.81□□□□□ -2.12
P20040 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC1.81□□□□□ -2.12
P20040 Gm43680-201ENSMUST00000199466 340 ntBASIC1.81□□□□□ -2.12
P20040 Gm43083-201ENSMUST00000199594 476 ntBASIC1.81□□□□□ -2.12
P20040 Gm44938-201ENSMUST00000208614 427 ntBASIC1.81□□□□□ -2.12
P20040 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC1.81□□□□□ -2.12
P20040 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.81□□□□□ -2.12
P20040 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC1.81□□□□□ -2.12
P20040 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC1.81□□□□□ -2.12
P20040 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.81□□□□□ -2.12
P20040 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.81□□□□□ -2.12
P20040 CT010480.5-201ENSMUST00000225026 217 ntBASIC1.81□□□□□ -2.12
P20040 AC154484.1-201ENSMUST00000227311 771 ntBASIC1.81□□□□□ -2.12
P20040 AC144628.2-201ENSMUST00000227374 352 ntBASIC1.81□□□□□ -2.12
P20040 Gm13728-201ENSMUST00000117471 400 ntBASIC1.8□□□□□ -2.12
P20040 Gm12304-201ENSMUST00000120312 385 ntBASIC1.8□□□□□ -2.12
P20040 Gm11363-201ENSMUST00000121672 548 ntBASIC1.8□□□□□ -2.12
P20040 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC1.8□□□□□ -2.12
P20040 Gm25488-201ENSMUST00000158728 118 ntBASIC1.8□□□□□ -2.12
P20040 Gm16584-201ENSMUST00000159267 189 ntBASIC1.8□□□□□ -2.12
P20040 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
P20040 Gm22192-201ENSMUST00000175128 85 ntBASIC1.8□□□□□ -2.12
P20040 Gm22166-201ENSMUST00000178419 121 ntBASIC1.8□□□□□ -2.12
P20040 Gm23288-201ENSMUST00000179213 121 ntBASIC1.8□□□□□ -2.12
P20040 Gm29231-201ENSMUST00000179850 319 ntBASIC1.8□□□□□ -2.12
P20040 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC1.8□□□□□ -2.12
P20040 Gm28648-201ENSMUST00000190092 343 ntBASIC1.8□□□□□ -2.12
P20040 Gm44870-201ENSMUST00000207291 357 ntBASIC1.8□□□□□ -2.12
P20040 Gm44910-201ENSMUST00000208451 396 ntBASIC1.8□□□□□ -2.12
P20040 Gm45730-201ENSMUST00000212560 395 ntBASIC1.8□□□□□ -2.12
P20040 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC1.8□□□□□ -2.12
P20040 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
P20040 Gm25632-201ENSMUST00000083112 85 ntBASIC1.8□□□□□ -2.12
P20040 Gm26265-201ENSMUST00000083277 135 ntBASIC1.8□□□□□ -2.12
P20040 AC124426.1-203ENSMUST00000221814 1362 ntBASIC1.8□□□□□ -2.12
P20040 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
P20040 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
P20040 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
P20040 Gm24098-201ENSMUST00000102075 109 ntBASIC1.79□□□□□ -2.12
P20040 Gm25381-201ENSMUST00000102078 109 ntBASIC1.79□□□□□ -2.12
P20040 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC1.79□□□□□ -2.12
P20040 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.79□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms