Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Msx1P13297 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Msx1P13297 Snord64-201ENSMUST00000104003 67 ntBASIC4.21□□□□□ -1.74
Msx1P13297 Gm24892-201ENSMUST00000122747 104 ntBASIC4.21□□□□□ -1.74
Msx1P13297 Gm27793-201ENSMUST00000183405 76 ntBASIC4.21□□□□□ -1.74
Msx1P13297 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.21□□□□□ -1.74
Msx1P13297 Gm44524-201ENSMUST00000203899 271 ntBASIC4.21□□□□□ -1.74
Msx1P13297 Gm3338-201ENSMUST00000220982 269 ntBASIC4.21□□□□□ -1.74
Msx1P13297 Mir323-201ENSMUST00000083683 86 ntBASIC4.21□□□□□ -1.74
Msx1P13297 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Msx1P13297 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
Msx1P13297 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Msx1P13297 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Msx1P13297 Gm45378-201ENSMUST00000211063 2711 ntBASIC4.21□□□□□ -1.74
Msx1P13297 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Msx1P13297 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Msx1P13297 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Msx1P13297 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Msx1P13297 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.2□□□□□ -1.74
Msx1P13297 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Msx1P13297 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Msx1P13297 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Msx1P13297 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.2□□□□□ -1.74
Msx1P13297 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
Msx1P13297 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Msx1P13297 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Msx1P13297 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Msx1P13297 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
Msx1P13297 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.2□□□□□ -1.74
Msx1P13297 Gm22269-201ENSMUST00000104002 130 ntBASIC4.2□□□□□ -1.74
Msx1P13297 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Msx1P13297 Gm22957-201ENSMUST00000122511 123 ntBASIC4.2□□□□□ -1.74
Msx1P13297 Gm22514-201ENSMUST00000122547 308 ntBASIC4.2□□□□□ -1.74
Msx1P13297 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC4.2□□□□□ -1.74
Msx1P13297 Gm25060-201ENSMUST00000157374 130 ntBASIC4.2□□□□□ -1.74
Msx1P13297 Gm23080-201ENSMUST00000157846 103 ntBASIC4.2□□□□□ -1.74
Msx1P13297 Gm25264-201ENSMUST00000158519 117 ntBASIC4.2□□□□□ -1.74
Msx1P13297 Mir5134-201ENSMUST00000175529 78 ntBASIC4.2□□□□□ -1.74
Msx1P13297 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC4.2□□□□□ -1.74
Msx1P13297 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC4.2□□□□□ -1.74
Msx1P13297 AC123709.1-201ENSMUST00000224848 345 ntBASIC4.2□□□□□ -1.74
Msx1P13297 AC166369.3-201ENSMUST00000227286 409 ntBASIC4.2□□□□□ -1.74
Msx1P13297 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Msx1P13297 Mir208a-201ENSMUST00000083498 83 ntBASIC4.2□□□□□ -1.74
Msx1P13297 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.2□□□□□ -1.74
Msx1P13297 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Msx1P13297 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Msx1P13297 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Msx1P13297 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Msx1P13297 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Msx1P13297 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
Msx1P13297 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.19□□□□□ -1.74
Msx1P13297 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Msx1P13297 Gm14107-201ENSMUST00000117774 330 ntBASIC4.19□□□□□ -1.74
Msx1P13297 Gm22490-201ENSMUST00000157188 119 ntBASIC4.19□□□□□ -1.74
Msx1P13297 Gm26360-201ENSMUST00000158872 103 ntBASIC4.19□□□□□ -1.74
Msx1P13297 Gm22243-201ENSMUST00000178754 120 ntBASIC4.19□□□□□ -1.74
Msx1P13297 Mir6370-201ENSMUST00000183510 120 ntBASIC4.19□□□□□ -1.74
Msx1P13297 Gm27952-201ENSMUST00000184748 105 ntBASIC4.19□□□□□ -1.74
Msx1P13297 Gm28650-201ENSMUST00000188413 411 ntBASIC4.19□□□□□ -1.74
Msx1P13297 Gm37116-201ENSMUST00000195161 147 ntBASIC4.19□□□□□ -1.74
Msx1P13297 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.19□□□□□ -1.74
Msx1P13297 Gm44879-201ENSMUST00000207007 503 ntBASIC4.19□□□□□ -1.74
Msx1P13297 Gm3086-202ENSMUST00000221248 310 ntBASIC4.19□□□□□ -1.74
Msx1P13297 Gm5548-201ENSMUST00000055878 397 ntBASIC4.19□□□□□ -1.74
Msx1P13297 Mir383-201ENSMUST00000083523 70 ntBASIC4.19□□□□□ -1.74
Msx1P13297 Mir369-201ENSMUST00000083627 79 ntBASIC4.19□□□□□ -1.74
Msx1P13297 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Msx1P13297 Gm37204-201ENSMUST00000192389 3961 ntBASIC4.19□□□□□ -1.74
Msx1P13297 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Msx1P13297 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Msx1P13297 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Msx1P13297 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.19□□□□□ -1.74
Msx1P13297 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
Msx1P13297 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Msx1P13297 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Msx1P13297 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Msx1P13297 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Msx1P13297 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Msx1P13297 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Msx1P13297 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.18□□□□□ -1.74
Msx1P13297 Mir676-201ENSMUST00000102443 89 ntBASIC4.18□□□□□ -1.74
Msx1P13297 Gm26011-201ENSMUST00000104410 104 ntBASIC4.18□□□□□ -1.74
Msx1P13297 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Msx1P13297 Gm12351-201ENSMUST00000118727 292 ntBASIC4.18□□□□□ -1.74
Msx1P13297 Gm14916-201ENSMUST00000121904 204 ntBASIC4.18□□□□□ -1.74
Msx1P13297 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC4.18□□□□□ -1.74
Msx1P13297 Gm13249-201ENSMUST00000177803 345 ntBASIC4.18□□□□□ -1.74
Msx1P13297 Gm13144-201ENSMUST00000179385 345 ntBASIC4.18□□□□□ -1.74
Msx1P13297 Gm27457-201ENSMUST00000184771 156 ntBASIC4.18□□□□□ -1.74
Msx1P13297 Gm18546-201ENSMUST00000197245 676 ntBASIC4.18□□□□□ -1.74
Msx1P13297 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.18□□□□□ -1.74
Msx1P13297 CT030159.4-201ENSMUST00000221966 395 ntBASIC4.18□□□□□ -1.74
Msx1P13297 Mir26a-2-201ENSMUST00000083496 84 ntBASIC4.18□□□□□ -1.74
Msx1P13297 Gm26165-201ENSMUST00000083791 138 ntBASIC4.18□□□□□ -1.74
Msx1P13297 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.18□□□□□ -1.74
Msx1P13297 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Msx1P13297 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Msx1P13297 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Msx1P13297 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms