Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm23760-201ENSMUST00000158350 116 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 Gm25051-201ENSMUST00000158602 249 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 Gm26159-201ENSMUST00000158968 104 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 Gm22631-201ENSMUST00000179656 94 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
Col5a1O88207 Gm27656-201ENSMUST00000185055 80 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC1.56□□□□□ -2.16
Col5a1O88207 Gm28337-201ENSMUST00000190425 666 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 Gm37778-201ENSMUST00000191732 190 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 Gm18964-201ENSMUST00000193013 563 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 Gm37757-201ENSMUST00000193072 210 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 Gm36866-201ENSMUST00000193343 657 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 Gm36047-201ENSMUST00000193659 657 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 Gm20857-201ENSMUST00000194766 657 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 Gm20858-201ENSMUST00000195459 657 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 Gm29809-201ENSMUST00000218423 493 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 Gm19563-201ENSMUST00000222031 270 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 AC159619.2-201ENSMUST00000222924 401 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 AC139350.4-201ENSMUST00000228483 798 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 AC158981.3-202ENSMUST00000228906 523 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
Col5a1O88207 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Col5a1O88207 Mir423-201ENSMUST00000083584 109 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 Mir320-201ENSMUST00000083594 82 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 Gm22353-201ENSMUST00000083918 136 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC1.56□□□□□ -2.16
Col5a1O88207 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Col5a1O88207 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Col5a1O88207 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Col5a1O88207 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Col5a1O88207 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Col5a1O88207 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Col5a1O88207 Gm15443-201ENSMUST00000118947 820 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 Gm11819-201ENSMUST00000122192 372 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 Gm24863-201ENSMUST00000179499 107 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 Gm26189-201ENSMUST00000179879 107 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Col5a1O88207 Gm24518-201ENSMUST00000180275 94 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 Mir6240-201ENSMUST00000184281 117 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 Gm28283-201ENSMUST00000185509 178 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC1.56□□□□□ -2.16
Col5a1O88207 Gm37658-201ENSMUST00000192672 315 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 Gm38044-201ENSMUST00000192964 487 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 Mir6962-201ENSMUST00000199512 63 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC1.56□□□□□ -2.16
Col5a1O88207 AC157017.2-201ENSMUST00000218354 777 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 Gm19441-201ENSMUST00000221545 330 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 AC164117.2-201ENSMUST00000222090 327 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 Gm26228-201ENSMUST00000082512 107 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 Gm25080-201ENSMUST00000082526 107 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 Gm24611-201ENSMUST00000083272 107 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 Gm25518-201ENSMUST00000083864 107 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Col5a1O88207 Gm23744-201ENSMUST00000104231 149 ntBASIC1.55□□□□□ -2.16
Col5a1O88207 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.55□□□□□ -2.16
Col5a1O88207 Gm14428-201ENSMUST00000120408 822 ntBASIC1.55□□□□□ -2.16
Col5a1O88207 Gm13339-201ENSMUST00000120651 510 ntBASIC1.55□□□□□ -2.16
Col5a1O88207 Gm14413-201ENSMUST00000122158 408 ntBASIC1.55□□□□□ -2.16
Col5a1O88207 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC1.55□□□□□ -2.16
Col5a1O88207 Gm23340-201ENSMUST00000158955 123 ntBASIC1.55□□□□□ -2.16
Col5a1O88207 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC1.55□□□□□ -2.16
Col5a1O88207 Gm27698-201ENSMUST00000184060 249 ntBASIC1.55□□□□□ -2.16
Col5a1O88207 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC1.55□□□□□ -2.16
Col5a1O88207 Gm28779-201ENSMUST00000189678 323 ntBASIC1.55□□□□□ -2.16
Col5a1O88207 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.55□□□□□ -2.16
Col5a1O88207 Gm34783-201ENSMUST00000209159 303 ntBASIC1.55□□□□□ -2.16
Col5a1O88207 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.55□□□□□ -2.16
Col5a1O88207 AC157772.2-201ENSMUST00000228202 259 ntBASIC1.55□□□□□ -2.16
Col5a1O88207 Gm23932-201ENSMUST00000082914 107 ntBASIC1.55□□□□□ -2.16
Col5a1O88207 Gm22229-201ENSMUST00000082987 108 ntBASIC1.55□□□□□ -2.16
Col5a1O88207 AC123052.1-201ENSMUST00000220604 4616 ntBASIC1.55□□□□□ -2.16
Col5a1O88207 Gm14910-201ENSMUST00000121037 1805 ntBASIC1.55□□□□□ -2.16
Col5a1O88207 Gm14442-201ENSMUST00000119690 1736 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm14915-201ENSMUST00000120747 204 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC1.54□□□□□ -2.16
Col5a1O88207 Gm22839-201ENSMUST00000158436 304 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm23476-201ENSMUST00000158881 274 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm17538-201ENSMUST00000168236 327 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm21737-201ENSMUST00000178112 664 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm21815-201ENSMUST00000178213 664 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm20874-201ENSMUST00000178356 663 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm21744-201ENSMUST00000178403 662 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm24100-201ENSMUST00000178592 79 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm24897-201ENSMUST00000179033 107 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Snord116l14-201ENSMUST00000179875 94 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm24137-201ENSMUST00000180055 79 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm20901-201ENSMUST00000180177 664 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm22391-201ENSMUST00000180356 79 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm20832-201ENSMUST00000189076 665 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC1.54□□□□□ -2.16
Col5a1O88207 Gm28151-201ENSMUST00000189404 951 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm21647-201ENSMUST00000189755 664 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm30638-201ENSMUST00000195570 656 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm36728-201ENSMUST00000195782 665 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm43578-201ENSMUST00000201250 459 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm44142-201ENSMUST00000203358 311 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm18703-201ENSMUST00000215318 333 ntBASIC1.54□□□□□ -2.16
Col5a1O88207 Gm8125-201ENSMUST00000216602 738 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms