Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Gm24468-201ENSMUST00000104489 104 ntBASIC0.42□□□□□ -2.34
Abca4O35600 Gm25560-201ENSMUST00000104606 176 ntBASIC0.42□□□□□ -2.34
Abca4O35600 Gm13085-201ENSMUST00000118356 171 ntBASIC0.42□□□□□ -2.34
Abca4O35600 Gm12837-201ENSMUST00000120131 373 ntBASIC0.42□□□□□ -2.34
Abca4O35600 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.42□□□□□ -2.34
Abca4O35600 Gm38323-201ENSMUST00000192450 210 ntBASIC0.42□□□□□ -2.34
Abca4O35600 Gm38274-201ENSMUST00000195689 148 ntBASIC0.42□□□□□ -2.34
Abca4O35600 Gm19140-201ENSMUST00000209790 421 ntBASIC0.42□□□□□ -2.34
Abca4O35600 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
Abca4O35600 Gm14932-201ENSMUST00000117112 453 ntBASIC0.42□□□□□ -2.34
Abca4O35600 Gm9001-201ENSMUST00000121642 399 ntBASIC0.42□□□□□ -2.34
Abca4O35600 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC0.42□□□□□ -2.34
Abca4O35600 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
Abca4O35600 Gm24963-201ENSMUST00000157916 144 ntBASIC0.42□□□□□ -2.34
Abca4O35600 Mir1966-201ENSMUST00000158807 108 ntBASIC0.42□□□□□ -2.34
Abca4O35600 Gm43142-201ENSMUST00000198670 361 ntBASIC0.42□□□□□ -2.34
Abca4O35600 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC0.42□□□□□ -2.34
Abca4O35600 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC0.42□□□□□ -2.34
Abca4O35600 AC154636.3-201ENSMUST00000221489 1214 ntBASIC0.42□□□□□ -2.34
Abca4O35600 AC154262.1-201ENSMUST00000225976 286 ntBASIC0.42□□□□□ -2.34
Abca4O35600 AC113031.5-201ENSMUST00000227116 606 ntBASIC0.42□□□□□ -2.34
Abca4O35600 CT025602.1-201ENSMUST00000227281 382 ntBASIC0.42□□□□□ -2.34
Abca4O35600 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
Abca4O35600 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC0.41□□□□□ -2.34
Abca4O35600 Gm13359-201ENSMUST00000119000 695 ntBASIC0.41□□□□□ -2.34
Abca4O35600 Gm6664-201ENSMUST00000119138 468 ntBASIC0.41□□□□□ -2.34
Abca4O35600 Gm11965-201ENSMUST00000122017 277 ntBASIC0.41□□□□□ -2.34
Abca4O35600 Gm25961-201ENSMUST00000157174 135 ntBASIC0.41□□□□□ -2.34
Abca4O35600 Gm26213-201ENSMUST00000158582 110 ntBASIC0.41□□□□□ -2.34
Abca4O35600 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC0.41□□□□□ -2.34
Abca4O35600 Gm18113-201ENSMUST00000220630 303 ntBASIC0.41□□□□□ -2.34
Abca4O35600 Snora34-201ENSMUST00000083402 138 ntBASIC0.41□□□□□ -2.34
Abca4O35600 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.41□□□□□ -2.34
Abca4O35600 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
Abca4O35600 Gm26236-201ENSMUST00000175536 137 ntBASIC0.41□□□□□ -2.34
Abca4O35600 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
Abca4O35600 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
Abca4O35600 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
Abca4O35600 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
Abca4O35600 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
Abca4O35600 Gm29299-201ENSMUST00000185609 923 ntBASIC0.41□□□□□ -2.34
Abca4O35600 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
Abca4O35600 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
Abca4O35600 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
Abca4O35600 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
Abca4O35600 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
Abca4O35600 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
Abca4O35600 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
Abca4O35600 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
Abca4O35600 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
Abca4O35600 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
Abca4O35600 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
Abca4O35600 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
Abca4O35600 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
Abca4O35600 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
Abca4O35600 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
Abca4O35600 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
Abca4O35600 Gm43407-201ENSMUST00000199816 317 ntBASIC0.41□□□□□ -2.34
Abca4O35600 AC165293.1-201ENSMUST00000219669 329 ntBASIC0.41□□□□□ -2.34
Abca4O35600 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
Abca4O35600 Gm16428-201ENSMUST00000121193 723 ntBASIC0.4□□□□□ -2.35
Abca4O35600 Gm23713-201ENSMUST00000157353 70 ntBASIC0.4□□□□□ -2.35
Abca4O35600 Gm22615-201ENSMUST00000158102 70 ntBASIC0.4□□□□□ -2.35
Abca4O35600 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
Abca4O35600 Gm27735-201ENSMUST00000185085 76 ntBASIC0.4□□□□□ -2.35
Abca4O35600 Gm7654-201ENSMUST00000186738 683 ntBASIC0.4□□□□□ -2.35
Abca4O35600 Gm23727-201ENSMUST00000083352 164 ntBASIC0.4□□□□□ -2.35
Abca4O35600 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC0.4□□□□□ -2.35
Abca4O35600 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
Abca4O35600 Gm14623-201ENSMUST00000121398 603 ntBASIC0.39□□□□□ -2.35
Abca4O35600 Gm14364-201ENSMUST00000129209 267 ntBASIC0.39□□□□□ -2.35
Abca4O35600 Gm24915-201ENSMUST00000157288 78 ntBASIC0.39□□□□□ -2.35
Abca4O35600 Gm44727-201ENSMUST00000204225 451 ntBASIC0.39□□□□□ -2.35
Abca4O35600 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
Abca4O35600 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
Abca4O35600 Gm25621-201ENSMUST00000157223 114 ntBASIC0.39□□□□□ -2.35
Abca4O35600 Gm24401-201ENSMUST00000157868 91 ntBASIC0.39□□□□□ -2.35
Abca4O35600 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC0.39□□□□□ -2.35
Abca4O35600 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC0.39□□□□□ -2.35
Abca4O35600 Gm37319-201ENSMUST00000193500 636 ntBASIC0.39□□□□□ -2.35
Abca4O35600 Gm43286-201ENSMUST00000197420 424 ntBASIC0.39□□□□□ -2.35
Abca4O35600 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
Abca4O35600 AC122242.1-201ENSMUST00000224650 304 ntBASIC0.39□□□□□ -2.35
Abca4O35600 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
Abca4O35600 Gm22685-201ENSMUST00000082848 106 ntBASIC0.39□□□□□ -2.35
Abca4O35600 Gm24535-201ENSMUST00000083140 107 ntBASIC0.39□□□□□ -2.35
Abca4O35600 Mir32-201ENSMUST00000083610 70 ntBASIC0.39□□□□□ -2.35
Abca4O35600 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
Abca4O35600 Gm23332-201ENSMUST00000157424 275 ntBASIC0.38□□□□□ -2.35
Abca4O35600 Mir1949-201ENSMUST00000157434 141 ntBASIC0.38□□□□□ -2.35
Abca4O35600 Gm2966-201ENSMUST00000166052 481 ntBASIC0.38□□□□□ -2.35
Abca4O35600 Gm17204-201ENSMUST00000167936 478 ntBASIC0.38□□□□□ -2.35
Abca4O35600 Gm24333-201ENSMUST00000175101 84 ntBASIC0.38□□□□□ -2.35
Abca4O35600 Gm28191-201ENSMUST00000189112 211 ntBASIC0.38□□□□□ -2.35
Abca4O35600 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC0.38□□□□□ -2.35
Abca4O35600 Gm24144-201ENSMUST00000082632 111 ntBASIC0.38□□□□□ -2.35
Abca4O35600 Gm25853-201ENSMUST00000082793 132 ntBASIC0.38□□□□□ -2.35
Abca4O35600 Zfp640-202ENSMUST00000224116 1562 ntBASIC0.38□□□□□ -2.35
Abca4O35600 Gm15088-201ENSMUST00000117973 1508 ntBASIC0.38□□□□□ -2.35
Abca4O35600 Gm15098-201ENSMUST00000119036 1508 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms