Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Gm11893-201ENSMUST00000117829 491 ntBASIC0.26□□□□□ -2.37
Col6a5A6H584 Gm11813-201ENSMUST00000118586 291 ntBASIC0.26□□□□□ -2.37
Col6a5A6H584 Gm22766-201ENSMUST00000158372 99 ntBASIC0.26□□□□□ -2.37
Col6a5A6H584 Gm22401-201ENSMUST00000174927 117 ntBASIC0.26□□□□□ -2.37
Col6a5A6H584 Gm27640-201ENSMUST00000184580 147 ntBASIC0.26□□□□□ -2.37
Col6a5A6H584 Gm42796-201ENSMUST00000199913 1087 ntBASIC0.26□□□□□ -2.37
Col6a5A6H584 Gm19237-201ENSMUST00000205036 1132 ntBASIC0.26□□□□□ -2.37
Col6a5A6H584 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC0.26□□□□□ -2.37
Col6a5A6H584 AC154832.1-201ENSMUST00000228928 141 ntBASIC0.26□□□□□ -2.37
Col6a5A6H584 Mir93-201ENSMUST00000083593 88 ntBASIC0.26□□□□□ -2.37
Col6a5A6H584 Gm38104-201ENSMUST00000195121 1895 ntBASIC0.25□□□□□ -2.37
Col6a5A6H584 Gm16354-201ENSMUST00000155376 150 ntBASIC0.25□□□□□ -2.37
Col6a5A6H584 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC0.25□□□□□ -2.37
Col6a5A6H584 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC0.25□□□□□ -2.37
Col6a5A6H584 Gm37713-201ENSMUST00000191746 198 ntBASIC0.25□□□□□ -2.37
Col6a5A6H584 Gm44455-201ENSMUST00000200061 82 ntBASIC0.25□□□□□ -2.37
Col6a5A6H584 Mir710-201ENSMUST00000102088 110 ntBASIC0.25□□□□□ -2.37
Col6a5A6H584 Gm6568-201ENSMUST00000122274 697 ntBASIC0.25□□□□□ -2.37
Col6a5A6H584 Gm14713-201ENSMUST00000122362 686 ntBASIC0.25□□□□□ -2.37
Col6a5A6H584 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
Col6a5A6H584 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
Col6a5A6H584 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
Col6a5A6H584 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
Col6a5A6H584 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
Col6a5A6H584 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
Col6a5A6H584 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC0.25□□□□□ -2.37
Col6a5A6H584 Gm5116-201ENSMUST00000187732 463 ntBASIC0.25□□□□□ -2.37
Col6a5A6H584 Gm6003-201ENSMUST00000187903 463 ntBASIC0.25□□□□□ -2.37
Col6a5A6H584 Gm29627-201ENSMUST00000187984 463 ntBASIC0.25□□□□□ -2.37
Col6a5A6H584 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC0.25□□□□□ -2.37
Col6a5A6H584 AC122465.3-201ENSMUST00000221644 355 ntBASIC0.25□□□□□ -2.37
Col6a5A6H584 AC163660.3-201ENSMUST00000224253 1563 ntBASIC0.25□□□□□ -2.37
Col6a5A6H584 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC0.25□□□□□ -2.37
Col6a5A6H584 Gm24142-201ENSMUST00000101960 107 ntBASIC0.24□□□□□ -2.37
Col6a5A6H584 Gm14940-201ENSMUST00000119309 495 ntBASIC0.24□□□□□ -2.37
Col6a5A6H584 Gm14069-201ENSMUST00000120815 229 ntBASIC0.24□□□□□ -2.37
Col6a5A6H584 Gm22385-201ENSMUST00000158189 101 ntBASIC0.24□□□□□ -2.37
Col6a5A6H584 Gm22942-201ENSMUST00000158563 124 ntBASIC0.24□□□□□ -2.37
Col6a5A6H584 Gm44482-201ENSMUST00000199232 103 ntBASIC0.24□□□□□ -2.37
Col6a5A6H584 Gm43199-201ENSMUST00000200019 307 ntBASIC0.24□□□□□ -2.37
Col6a5A6H584 AC153506.2-201ENSMUST00000218051 257 ntBASIC0.24□□□□□ -2.37
Col6a5A6H584 AC167229.1-201ENSMUST00000220057 469 ntBASIC0.24□□□□□ -2.37
Col6a5A6H584 Gm5287-201ENSMUST00000120666 598 ntBASIC0.24□□□□□ -2.37
Col6a5A6H584 Gm23429-201ENSMUST00000122486 149 ntBASIC0.24□□□□□ -2.37
Col6a5A6H584 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC0.24□□□□□ -2.37
Col6a5A6H584 Gm20613-201ENSMUST00000175828 345 ntBASIC0.24□□□□□ -2.37
Col6a5A6H584 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC0.24□□□□□ -2.37
Col6a5A6H584 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC0.24□□□□□ -2.37
Col6a5A6H584 CT010449.1-201ENSMUST00000220624 153 ntBASIC0.24□□□□□ -2.37
Col6a5A6H584 AC158388.1-201ENSMUST00000225441 256 ntBASIC0.24□□□□□ -2.37
Col6a5A6H584 AC124524.1-201ENSMUST00000225833 181 ntBASIC0.24□□□□□ -2.37
Col6a5A6H584 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC0.23□□□□□ -2.37
Col6a5A6H584 Gm14566-201ENSMUST00000118915 321 ntBASIC0.23□□□□□ -2.37
Col6a5A6H584 Gm25966-201ENSMUST00000157169 117 ntBASIC0.23□□□□□ -2.37
Col6a5A6H584 Gm27884-201ENSMUST00000183865 76 ntBASIC0.23□□□□□ -2.37
Col6a5A6H584 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC0.23□□□□□ -2.37
Col6a5A6H584 Gm19599-201ENSMUST00000218898 358 ntBASIC0.23□□□□□ -2.37
Col6a5A6H584 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
Col6a5A6H584 Gm24149-201ENSMUST00000082757 107 ntBASIC0.23□□□□□ -2.37
Col6a5A6H584 Mir216a-201ENSMUST00000083605 72 ntBASIC0.23□□□□□ -2.37
Col6a5A6H584 Mirlet7b-201ENSMUST00000083630 85 ntBASIC0.23□□□□□ -2.37
Col6a5A6H584 Gm14445-201ENSMUST00000117051 1484 ntBASIC0.23□□□□□ -2.37
Col6a5A6H584 Gm14937-201ENSMUST00000119709 208 ntBASIC0.23□□□□□ -2.37
Col6a5A6H584 Gm12771-201ENSMUST00000120246 135 ntBASIC0.23□□□□□ -2.37
Col6a5A6H584 Gm23523-201ENSMUST00000180190 107 ntBASIC0.23□□□□□ -2.37
Col6a5A6H584 Gm27236-201ENSMUST00000184147 442 ntBASIC0.23□□□□□ -2.37
Col6a5A6H584 Gm44349-201ENSMUST00000197048 123 ntBASIC0.23□□□□□ -2.37
Col6a5A6H584 Gm44059-201ENSMUST00000204048 351 ntBASIC0.23□□□□□ -2.37
Col6a5A6H584 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.23□□□□□ -2.37
Col6a5A6H584 Gm12080-201ENSMUST00000119821 1883 ntBASIC0.23□□□□□ -2.37
Col6a5A6H584 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
Col6a5A6H584 Gm24283-201ENSMUST00000104233 107 ntBASIC0.22□□□□□ -2.37
Col6a5A6H584 Gm22151-201ENSMUST00000116963 58 ntBASIC0.22□□□□□ -2.37
Col6a5A6H584 Gm26478-201ENSMUST00000122611 133 ntBASIC0.22□□□□□ -2.37
Col6a5A6H584 Gm22944-201ENSMUST00000158662 133 ntBASIC0.22□□□□□ -2.37
Col6a5A6H584 Gm17085-201ENSMUST00000165425 502 ntBASIC0.22□□□□□ -2.37
Col6a5A6H584 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC0.22□□□□□ -2.37
Col6a5A6H584 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC0.22□□□□□ -2.37
Col6a5A6H584 Gm44338-201ENSMUST00000198614 110 ntBASIC0.22□□□□□ -2.37
Col6a5A6H584 AC162934.3-201ENSMUST00000223015 841 ntBASIC0.22□□□□□ -2.37
Col6a5A6H584 Gm22004-201ENSMUST00000101884 107 ntBASIC0.22□□□□□ -2.37
Col6a5A6H584 Gm8217-201ENSMUST00000119136 465 ntBASIC0.22□□□□□ -2.37
Col6a5A6H584 Gm12639-201ENSMUST00000121400 493 ntBASIC0.22□□□□□ -2.37
Col6a5A6H584 Gm22107-201ENSMUST00000122548 100 ntBASIC0.22□□□□□ -2.37
Col6a5A6H584 Gm38329-201ENSMUST00000193473 427 ntBASIC0.22□□□□□ -2.37
Col6a5A6H584 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.22□□□□□ -2.37
Col6a5A6H584 CT030166.1-201ENSMUST00000222654 357 ntBASIC0.22□□□□□ -2.37
Col6a5A6H584 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
Col6a5A6H584 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.22□□□□□ -2.37
Col6a5A6H584 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC0.21□□□□□ -2.38
Col6a5A6H584 Gm23586-201ENSMUST00000157657 123 ntBASIC0.21□□□□□ -2.38
Col6a5A6H584 Gm28344-201ENSMUST00000185704 279 ntBASIC0.21□□□□□ -2.38
Col6a5A6H584 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC0.21□□□□□ -2.38
Col6a5A6H584 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC0.21□□□□□ -2.38
Col6a5A6H584 Gm19540-201ENSMUST00000221843 810 ntBASIC0.21□□□□□ -2.38
Col6a5A6H584 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
Col6a5A6H584 Gm26108-201ENSMUST00000083973 191 ntBASIC0.21□□□□□ -2.38
Col6a5A6H584 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
Col6a5A6H584 Gm23332-201ENSMUST00000157424 275 ntBASIC0.21□□□□□ -2.38
Col6a5A6H584 Gm25520-201ENSMUST00000158389 118 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 113.7 ms