Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm8207-201ENSMUST00000171204 502 ntBASIC0.78□□□□□ -2.28
Col6a4A2AX52 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
Col6a4A2AX52 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
Col6a4A2AX52 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
Col6a4A2AX52 Gm26189-201ENSMUST00000179879 107 ntBASIC0.78□□□□□ -2.28
Col6a4A2AX52 Gm42774-201ENSMUST00000198854 283 ntBASIC0.78□□□□□ -2.28
Col6a4A2AX52 Igkv1-136-201ENSMUST00000200635 297 ntBASIC0.78□□□□□ -2.28
Col6a4A2AX52 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC0.78□□□□□ -2.28
Col6a4A2AX52 Gm18729-201ENSMUST00000217230 621 ntBASIC0.78□□□□□ -2.28
Col6a4A2AX52 AC160031.2-201ENSMUST00000218242 274 ntBASIC0.78□□□□□ -2.28
Col6a4A2AX52 AC069074.1-201ENSMUST00000220048 381 ntBASIC0.78□□□□□ -2.28
Col6a4A2AX52 CT009764.1-201ENSMUST00000222260 483 ntBASIC0.78□□□□□ -2.28
Col6a4A2AX52 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
Col6a4A2AX52 Mir1197-201ENSMUST00000117037 120 ntBASIC0.78□□□□□ -2.28
Col6a4A2AX52 Gm15279-201ENSMUST00000155593 288 ntBASIC0.78□□□□□ -2.28
Col6a4A2AX52 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
Col6a4A2AX52 Gm18358-201ENSMUST00000173179 1277 ntBASIC0.78□□□□□ -2.28
Col6a4A2AX52 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC0.78□□□□□ -2.28
Col6a4A2AX52 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC0.78□□□□□ -2.28
Col6a4A2AX52 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
Col6a4A2AX52 Gm38044-201ENSMUST00000192964 487 ntBASIC0.78□□□□□ -2.28
Col6a4A2AX52 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC0.78□□□□□ -2.28
Col6a4A2AX52 AC164567.2-201ENSMUST00000219363 445 ntBASIC0.78□□□□□ -2.28
Col6a4A2AX52 AC161758.1-201ENSMUST00000226123 310 ntBASIC0.78□□□□□ -2.28
Col6a4A2AX52 Gm25799-201ENSMUST00000082643 107 ntBASIC0.78□□□□□ -2.28
Col6a4A2AX52 Gm23452-201ENSMUST00000083327 107 ntBASIC0.78□□□□□ -2.28
Col6a4A2AX52 Mir27b-201ENSMUST00000083541 73 ntBASIC0.78□□□□□ -2.28
Col6a4A2AX52 Gm25411-201ENSMUST00000083760 151 ntBASIC0.78□□□□□ -2.28
Col6a4A2AX52 Gm25008-201ENSMUST00000083809 81 ntBASIC0.78□□□□□ -2.28
Col6a4A2AX52 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC0.78□□□□□ -2.29
Col6a4A2AX52 Gm14558-201ENSMUST00000117458 381 ntBASIC0.77□□□□□ -2.29
Col6a4A2AX52 Gm14600-201ENSMUST00000121032 630 ntBASIC0.77□□□□□ -2.29
Col6a4A2AX52 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC0.77□□□□□ -2.29
Col6a4A2AX52 Gm2966-201ENSMUST00000166052 481 ntBASIC0.77□□□□□ -2.29
Col6a4A2AX52 Ighv12-2-201ENSMUST00000191949 362 ntBASIC0.77□□□□□ -2.29
Col6a4A2AX52 Gm33354-201ENSMUST00000195448 906 ntBASIC0.77□□□□□ -2.29
Col6a4A2AX52 Mir22-201ENSMUST00000083595 95 ntBASIC0.77□□□□□ -2.29
Col6a4A2AX52 Mir29c-201ENSMUST00000083614 88 ntBASIC0.77□□□□□ -2.29
Col6a4A2AX52 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC0.77□□□□□ -2.29
Col6a4A2AX52 Gm12872-201ENSMUST00000121835 320 ntBASIC0.77□□□□□ -2.29
Col6a4A2AX52 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC0.77□□□□□ -2.29
Col6a4A2AX52 Gm22098-201ENSMUST00000157930 85 ntBASIC0.77□□□□□ -2.29
Col6a4A2AX52 Gm26363-201ENSMUST00000158866 83 ntBASIC0.77□□□□□ -2.29
Col6a4A2AX52 Gm25730-201ENSMUST00000178753 165 ntBASIC0.77□□□□□ -2.29
Col6a4A2AX52 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC0.77□□□□□ -2.29
Col6a4A2AX52 Gm27587-201ENSMUST00000185116 163 ntBASIC0.77□□□□□ -2.29
Col6a4A2AX52 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC0.77□□□□□ -2.29
Col6a4A2AX52 Gm45173-201ENSMUST00000206819 305 ntBASIC0.77□□□□□ -2.29
Col6a4A2AX52 Gm2446-201ENSMUST00000220144 772 ntBASIC0.77□□□□□ -2.29
Col6a4A2AX52 AC159709.1-201ENSMUST00000220445 349 ntBASIC0.77□□□□□ -2.29
Col6a4A2AX52 Gm24948-201ENSMUST00000082866 207 ntBASIC0.77□□□□□ -2.29
Col6a4A2AX52 Mir300-201ENSMUST00000083485 79 ntBASIC0.77□□□□□ -2.29
Col6a4A2AX52 Mir101a-201ENSMUST00000083517 83 ntBASIC0.77□□□□□ -2.29
Col6a4A2AX52 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC0.77□□□□□ -2.29
Col6a4A2AX52 AC124456.1-201ENSMUST00000217391 2597 ntBASIC0.77□□□□□ -2.29
Col6a4A2AX52 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
Col6a4A2AX52 Gm15211-201ENSMUST00000118932 528 ntBASIC0.76□□□□□ -2.29
Col6a4A2AX52 Gm26275-201ENSMUST00000157101 268 ntBASIC0.76□□□□□ -2.29
Col6a4A2AX52 Gm22315-201ENSMUST00000158010 143 ntBASIC0.76□□□□□ -2.29
Col6a4A2AX52 Gm25247-201ENSMUST00000175475 90 ntBASIC0.76□□□□□ -2.29
Col6a4A2AX52 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.76□□□□□ -2.29
Col6a4A2AX52 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
Col6a4A2AX52 Gm37568-201ENSMUST00000191755 364 ntBASIC0.76□□□□□ -2.29
Col6a4A2AX52 Gm9402-201ENSMUST00000196849 388 ntBASIC0.76□□□□□ -2.29
Col6a4A2AX52 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC0.76□□□□□ -2.29
Col6a4A2AX52 Gm44446-201ENSMUST00000204864 255 ntBASIC0.76□□□□□ -2.29
Col6a4A2AX52 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
Col6a4A2AX52 Gm15088-201ENSMUST00000117973 1508 ntBASIC0.76□□□□□ -2.29
Col6a4A2AX52 Gm15098-201ENSMUST00000119036 1508 ntBASIC0.76□□□□□ -2.29
Col6a4A2AX52 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC0.76□□□□□ -2.29
Col6a4A2AX52 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
Col6a4A2AX52 Gm25047-201ENSMUST00000122667 104 ntBASIC0.76□□□□□ -2.29
Col6a4A2AX52 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC0.76□□□□□ -2.29
Col6a4A2AX52 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC0.76□□□□□ -2.29
Col6a4A2AX52 Gm23020-201ENSMUST00000158766 253 ntBASIC0.76□□□□□ -2.29
Col6a4A2AX52 Gm17119-201ENSMUST00000163943 280 ntBASIC0.76□□□□□ -2.29
Col6a4A2AX52 Spanxn4-201ENSMUST00000172433 424 ntBASIC0.76□□□□□ -2.29
Col6a4A2AX52 Gm25120-201ENSMUST00000180148 79 ntBASIC0.76□□□□□ -2.29
Col6a4A2AX52 Gm29389-201ENSMUST00000191562 352 ntBASIC0.76□□□□□ -2.29
Col6a4A2AX52 Gm43171-201ENSMUST00000199882 291 ntBASIC0.76□□□□□ -2.29
Col6a4A2AX52 Gm44554-201ENSMUST00000208738 147 ntBASIC0.76□□□□□ -2.29
Col6a4A2AX52 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
Col6a4A2AX52 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
Col6a4A2AX52 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
Col6a4A2AX52 Gm15659-201ENSMUST00000118881 341 ntBASIC0.75□□□□□ -2.29
Col6a4A2AX52 Gm11786-201ENSMUST00000120799 155 ntBASIC0.75□□□□□ -2.29
Col6a4A2AX52 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC0.75□□□□□ -2.29
Col6a4A2AX52 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
Col6a4A2AX52 Gm25334-201ENSMUST00000158036 110 ntBASIC0.75□□□□□ -2.29
Col6a4A2AX52 Gm24264-201ENSMUST00000179835 94 ntBASIC0.75□□□□□ -2.29
Col6a4A2AX52 Gm38060-201ENSMUST00000194822 464 ntBASIC0.75□□□□□ -2.29
Col6a4A2AX52 Gm46193-201ENSMUST00000219399 364 ntBASIC0.75□□□□□ -2.29
Col6a4A2AX52 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
Col6a4A2AX52 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
Col6a4A2AX52 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC0.75□□□□□ -2.29
Col6a4A2AX52 Gm22689-201ENSMUST00000102452 110 ntBASIC0.75□□□□□ -2.29
Col6a4A2AX52 Gm14774-201ENSMUST00000117857 536 ntBASIC0.75□□□□□ -2.29
Col6a4A2AX52 Gm12889-201ENSMUST00000118684 241 ntBASIC0.75□□□□□ -2.29
Col6a4A2AX52 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC0.75□□□□□ -2.29
Col6a4A2AX52 Gm25194-201ENSMUST00000177987 79 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms