Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC0.62□□□□□ -2.31
Trav12-1A0N8R1 Gm18410-201ENSMUST00000207199 577 ntBASIC0.62□□□□□ -2.31
Trav12-1A0N8R1 Gm18774-201ENSMUST00000218269 601 ntBASIC0.62□□□□□ -2.31
Trav12-1A0N8R1 Gm3563-201ENSMUST00000172963 1628 ntBASIC0.61□□□□□ -2.31
Trav12-1A0N8R1 Gm14923-201ENSMUST00000118270 155 ntBASIC0.61□□□□□ -2.31
Trav12-1A0N8R1 Gm14669-201ENSMUST00000118841 250 ntBASIC0.61□□□□□ -2.31
Trav12-1A0N8R1 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC0.61□□□□□ -2.31
Trav12-1A0N8R1 Gm2878-201ENSMUST00000170173 486 ntBASIC0.61□□□□□ -2.31
Trav12-1A0N8R1 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC0.61□□□□□ -2.31
Trav12-1A0N8R1 Mir28b-201ENSMUST00000175399 80 ntBASIC0.61□□□□□ -2.31
Trav12-1A0N8R1 Gm24573-201ENSMUST00000175499 112 ntBASIC0.61□□□□□ -2.31
Trav12-1A0N8R1 Gm28200-201ENSMUST00000187778 315 ntBASIC0.61□□□□□ -2.31
Trav12-1A0N8R1 Gm29378-201ENSMUST00000188723 315 ntBASIC0.61□□□□□ -2.31
Trav12-1A0N8R1 Gm28909-201ENSMUST00000189406 315 ntBASIC0.61□□□□□ -2.31
Trav12-1A0N8R1 Gm37098-201ENSMUST00000192290 244 ntBASIC0.61□□□□□ -2.31
Trav12-1A0N8R1 Gm17771-201ENSMUST00000194477 1147 ntBASIC0.61□□□□□ -2.31
Trav12-1A0N8R1 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC0.61□□□□□ -2.31
Trav12-1A0N8R1 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC0.61□□□□□ -2.31
Trav12-1A0N8R1 AC123062.1-201ENSMUST00000221287 481 ntBASIC0.61□□□□□ -2.31
Trav12-1A0N8R1 AC158142.3-201ENSMUST00000226230 675 ntBASIC0.61□□□□□ -2.31
Trav12-1A0N8R1 AC133156.1-202ENSMUST00000227284 363 ntBASIC0.61□□□□□ -2.31
Trav12-1A0N8R1 Gm25257-201ENSMUST00000083907 110 ntBASIC0.61□□□□□ -2.31
Trav12-1A0N8R1 Gm22678-201ENSMUST00000116974 101 ntBASIC0.6□□□□□ -2.31
Trav12-1A0N8R1 Gm12591-201ENSMUST00000122407 1177 ntBASIC0.6□□□□□ -2.31
Trav12-1A0N8R1 Gm22098-201ENSMUST00000157930 85 ntBASIC0.6□□□□□ -2.31
Trav12-1A0N8R1 Gm24854-201ENSMUST00000158025 98 ntBASIC0.6□□□□□ -2.31
Trav12-1A0N8R1 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC0.6□□□□□ -2.31
Trav12-1A0N8R1 Gm25020-201ENSMUST00000178071 107 ntBASIC0.6□□□□□ -2.31
Trav12-1A0N8R1 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC0.6□□□□□ -2.31
Trav12-1A0N8R1 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.6□□□□□ -2.31
Trav12-1A0N8R1 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC0.6□□□□□ -2.31
Trav12-1A0N8R1 Gm45240-201ENSMUST00000211437 674 ntBASIC0.6□□□□□ -2.31
Trav12-1A0N8R1 AC112935.1-201ENSMUST00000227603 250 ntBASIC0.6□□□□□ -2.31
Trav12-1A0N8R1 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
Trav12-1A0N8R1 n-R5s37-201ENSMUST00000082533 118 ntBASIC0.6□□□□□ -2.31
Trav12-1A0N8R1 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC0.6□□□□□ -2.31
Trav12-1A0N8R1 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
Trav12-1A0N8R1 Gm23766-201ENSMUST00000103894 80 ntBASIC0.59□□□□□ -2.31
Trav12-1A0N8R1 Gm24579-201ENSMUST00000103964 144 ntBASIC0.59□□□□□ -2.31
Trav12-1A0N8R1 Gm26074-201ENSMUST00000104063 129 ntBASIC0.59□□□□□ -2.31
Trav12-1A0N8R1 Gm13356-201ENSMUST00000121678 335 ntBASIC0.59□□□□□ -2.31
Trav12-1A0N8R1 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC0.59□□□□□ -2.31
Trav12-1A0N8R1 Gm22611-201ENSMUST00000158288 150 ntBASIC0.59□□□□□ -2.31
Trav12-1A0N8R1 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.59□□□□□ -2.31
Trav12-1A0N8R1 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC0.59□□□□□ -2.31
Trav12-1A0N8R1 Gm24417-201ENSMUST00000178123 79 ntBASIC0.59□□□□□ -2.31
Trav12-1A0N8R1 Gm24653-201ENSMUST00000178541 79 ntBASIC0.59□□□□□ -2.31
Trav12-1A0N8R1 Gm25934-201ENSMUST00000178642 79 ntBASIC0.59□□□□□ -2.31
Trav12-1A0N8R1 Gm21758-201ENSMUST00000179336 819 ntBASIC0.59□□□□□ -2.31
Trav12-1A0N8R1 Gm27326-201ENSMUST00000183504 95 ntBASIC0.59□□□□□ -2.31
Trav12-1A0N8R1 Gm28995-201ENSMUST00000186625 261 ntBASIC0.59□□□□□ -2.31
Trav12-1A0N8R1 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC0.59□□□□□ -2.31
Trav12-1A0N8R1 Gm29647-201ENSMUST00000188795 666 ntBASIC0.59□□□□□ -2.31
Trav12-1A0N8R1 Gm20832-201ENSMUST00000189076 665 ntBASIC0.59□□□□□ -2.31
Trav12-1A0N8R1 Gm28241-201ENSMUST00000190916 235 ntBASIC0.59□□□□□ -2.31
Trav12-1A0N8R1 Gm28504-201ENSMUST00000190977 666 ntBASIC0.59□□□□□ -2.31
Trav12-1A0N8R1 Gm35843-201ENSMUST00000193716 666 ntBASIC0.59□□□□□ -2.31
Trav12-1A0N8R1 Gm37743-201ENSMUST00000194645 376 ntBASIC0.59□□□□□ -2.31
Trav12-1A0N8R1 Gm36728-201ENSMUST00000195782 665 ntBASIC0.59□□□□□ -2.31
Trav12-1A0N8R1 Gm45590-201ENSMUST00000209715 262 ntBASIC0.59□□□□□ -2.31
Trav12-1A0N8R1 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC0.59□□□□□ -2.31
Trav12-1A0N8R1 Gm21089-201ENSMUST00000215843 325 ntBASIC0.59□□□□□ -2.31
Trav12-1A0N8R1 Mir221-201ENSMUST00000083488 95 ntBASIC0.59□□□□□ -2.31
Trav12-1A0N8R1 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC0.59□□□□□ -2.31
Trav12-1A0N8R1 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC0.59□□□□□ -2.32
Trav12-1A0N8R1 Gm18795-202ENSMUST00000223373 2920 ntBASIC0.58□□□□□ -2.32
Trav12-1A0N8R1 Gm9001-201ENSMUST00000121642 399 ntBASIC0.58□□□□□ -2.32
Trav12-1A0N8R1 Gm22452-201ENSMUST00000122804 104 ntBASIC0.58□□□□□ -2.32
Trav12-1A0N8R1 Gm24221-201ENSMUST00000158833 313 ntBASIC0.58□□□□□ -2.32
Trav12-1A0N8R1 Gm23967-201ENSMUST00000175062 78 ntBASIC0.58□□□□□ -2.32
Trav12-1A0N8R1 Gm24154-201ENSMUST00000175261 130 ntBASIC0.58□□□□□ -2.32
Trav12-1A0N8R1 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
Trav12-1A0N8R1 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
Trav12-1A0N8R1 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC0.58□□□□□ -2.32
Trav12-1A0N8R1 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
Trav12-1A0N8R1 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
Trav12-1A0N8R1 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC0.58□□□□□ -2.32
Trav12-1A0N8R1 Gm18691-201ENSMUST00000203593 872 ntBASIC0.58□□□□□ -2.32
Trav12-1A0N8R1 AC102352.1-201ENSMUST00000224187 582 ntBASIC0.58□□□□□ -2.32
Trav12-1A0N8R1 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
Trav12-1A0N8R1 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
Trav12-1A0N8R1 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
Trav12-1A0N8R1 Gm13378-201ENSMUST00000117483 336 ntBASIC0.57□□□□□ -2.32
Trav12-1A0N8R1 Gm12053-201ENSMUST00000119022 252 ntBASIC0.57□□□□□ -2.32
Trav12-1A0N8R1 Gm15309-201ENSMUST00000121644 240 ntBASIC0.57□□□□□ -2.32
Trav12-1A0N8R1 Gm26348-201ENSMUST00000157528 240 ntBASIC0.57□□□□□ -2.32
Trav12-1A0N8R1 Gm24851-201ENSMUST00000158028 103 ntBASIC0.57□□□□□ -2.32
Trav12-1A0N8R1 Gm26038-201ENSMUST00000158151 106 ntBASIC0.57□□□□□ -2.32
Trav12-1A0N8R1 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC0.57□□□□□ -2.32
Trav12-1A0N8R1 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.57□□□□□ -2.32
Trav12-1A0N8R1 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.57□□□□□ -2.32
Trav12-1A0N8R1 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.57□□□□□ -2.32
Trav12-1A0N8R1 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.57□□□□□ -2.32
Trav12-1A0N8R1 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.57□□□□□ -2.32
Trav12-1A0N8R1 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.57□□□□□ -2.32
Trav12-1A0N8R1 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.57□□□□□ -2.32
Trav12-1A0N8R1 Gm21978-201ENSMUST00000179696 377 ntBASIC0.57□□□□□ -2.32
Trav12-1A0N8R1 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.57□□□□□ -2.32
Trav12-1A0N8R1 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC0.57□□□□□ -2.32
Trav12-1A0N8R1 Trbv22-201ENSMUST00000191697 291 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms