Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Gm45614-201ENSMUST00000209994 721 ntBASIC0.17□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm18774-201ENSMUST00000218269 601 ntBASIC0.17□□□□□ -2.38
Trav4-3A0A0B4J1K1 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.17□□□□□ -2.38
Trav4-3A0A0B4J1K1 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC0.17□□□□□ -2.38
Trav4-3A0A0B4J1K1 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.17□□□□□ -2.38
Trav4-3A0A0B4J1K1 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
Trav4-3A0A0B4J1K1 n-R5s80-201ENSMUST00000122596 111 ntBASIC0.16□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm25283-201ENSMUST00000157272 77 ntBASIC0.16□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm23208-201ENSMUST00000158666 127 ntBASIC0.16□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm26968-201ENSMUST00000182894 481 ntBASIC0.16□□□□□ -2.38
Trav4-3A0A0B4J1K1 Mir8106-201ENSMUST00000184520 139 ntBASIC0.16□□□□□ -2.38
Trav4-3A0A0B4J1K1 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.16□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm44326-201ENSMUST00000198226 101 ntBASIC0.16□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm44825-201ENSMUST00000207557 150 ntBASIC0.16□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm44598-201ENSMUST00000207566 150 ntBASIC0.16□□□□□ -2.38
Trav4-3A0A0B4J1K1 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC0.16□□□□□ -2.38
Trav4-3A0A0B4J1K1 AC114010.1-201ENSMUST00000222060 379 ntBASIC0.16□□□□□ -2.38
Trav4-3A0A0B4J1K1 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.16□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm25038-201ENSMUST00000082928 130 ntBASIC0.16□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm14445-201ENSMUST00000117051 1484 ntBASIC0.16□□□□□ -2.38
Trav4-3A0A0B4J1K1 Mir1193-201ENSMUST00000116761 121 ntBASIC0.15□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm16431-201ENSMUST00000117454 431 ntBASIC0.15□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm12889-201ENSMUST00000118684 241 ntBASIC0.15□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm12507-201ENSMUST00000119155 415 ntBASIC0.15□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm11862-201ENSMUST00000119678 659 ntBASIC0.15□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm14980-201ENSMUST00000121247 736 ntBASIC0.15□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm16373-201ENSMUST00000129517 303 ntBASIC0.15□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm23983-201ENSMUST00000157142 114 ntBASIC0.15□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm23441-201ENSMUST00000157268 127 ntBASIC0.15□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm23328-201ENSMUST00000157418 132 ntBASIC0.15□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm22731-201ENSMUST00000158086 94 ntBASIC0.15□□□□□ -2.39
Trav4-3A0A0B4J1K1 Mir3112-201ENSMUST00000175431 82 ntBASIC0.15□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm27326-201ENSMUST00000183504 95 ntBASIC0.15□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm29613-201ENSMUST00000185846 313 ntBASIC0.15□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm29544-201ENSMUST00000188860 313 ntBASIC0.15□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm28808-201ENSMUST00000190978 313 ntBASIC0.15□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC0.15□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm45912-201ENSMUST00000210646 543 ntBASIC0.15□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm45878-201ENSMUST00000211839 241 ntBASIC0.15□□□□□ -2.39
Trav4-3A0A0B4J1K1 AC158597.1-201ENSMUST00000216234 150 ntBASIC0.15□□□□□ -2.39
Trav4-3A0A0B4J1K1 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm46193-201ENSMUST00000219399 364 ntBASIC0.15□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm9472-201ENSMUST00000221625 526 ntBASIC0.15□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC0.15□□□□□ -2.39
Trav4-3A0A0B4J1K1 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.15□□□□□ -2.39
Trav4-3A0A0B4J1K1 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC0.15□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm24920-201ENSMUST00000083018 85 ntBASIC0.15□□□□□ -2.39
Trav4-3A0A0B4J1K1 Snord1a-201ENSMUST00000083160 74 ntBASIC0.15□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm5670-201ENSMUST00000093546 372 ntBASIC0.15□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm26327-201ENSMUST00000093724 111 ntBASIC0.15□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm22019-201ENSMUST00000104359 96 ntBASIC0.14□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm13885-201ENSMUST00000117569 187 ntBASIC0.14□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm14517-201ENSMUST00000119040 337 ntBASIC0.14□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC0.14□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm23672-201ENSMUST00000157471 107 ntBASIC0.14□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm23289-201ENSMUST00000175615 108 ntBASIC0.14□□□□□ -2.39
Trav4-3A0A0B4J1K1 Mir6370-201ENSMUST00000183510 120 ntBASIC0.14□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm29490-201ENSMUST00000190923 342 ntBASIC0.14□□□□□ -2.39
Trav4-3A0A0B4J1K1 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC0.14□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm44564-201ENSMUST00000207985 180 ntBASIC0.14□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm45438-201ENSMUST00000210242 564 ntBASIC0.14□□□□□ -2.39
Trav4-3A0A0B4J1K1 AC167202.1-201ENSMUST00000219027 331 ntBASIC0.14□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC0.14□□□□□ -2.39
Trav4-3A0A0B4J1K1 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm25589-201ENSMUST00000082502 166 ntBASIC0.14□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm25851-201ENSMUST00000082794 107 ntBASIC0.14□□□□□ -2.39
Trav4-3A0A0B4J1K1 Mir33-201ENSMUST00000083531 69 ntBASIC0.14□□□□□ -2.39
Trav4-3A0A0B4J1K1 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC0.14□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm9432-201ENSMUST00000117810 759 ntBASIC0.13□□□□□ -2.39
Trav4-3A0A0B4J1K1 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC0.13□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm12001-201ENSMUST00000121727 913 ntBASIC0.13□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm22477-201ENSMUST00000122569 316 ntBASIC0.13□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm8207-201ENSMUST00000171204 502 ntBASIC0.13□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm28409-201ENSMUST00000187064 103 ntBASIC0.13□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm20257-202ENSMUST00000188643 130 ntBASIC0.13□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC0.13□□□□□ -2.39
Trav4-3A0A0B4J1K1 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.13□□□□□ -2.39
Trav4-3A0A0B4J1K1 CT485612.4-201ENSMUST00000223405 250 ntBASIC0.13□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.13□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.13□□□□□ -2.39
Trav4-3A0A0B4J1K1 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC0.13□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm12392-201ENSMUST00000118014 938 ntBASIC0.12□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm13992-201ENSMUST00000120558 156 ntBASIC0.12□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm5396-201ENSMUST00000121222 532 ntBASIC0.12□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm23277-201ENSMUST00000157914 136 ntBASIC0.12□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm25898-201ENSMUST00000158303 106 ntBASIC0.12□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm23760-201ENSMUST00000158350 116 ntBASIC0.12□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm22163-201ENSMUST00000158408 135 ntBASIC0.12□□□□□ -2.39
Trav4-3A0A0B4J1K1 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC0.12□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm24573-201ENSMUST00000175499 112 ntBASIC0.12□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm27013-201ENSMUST00000182441 1024 ntBASIC0.12□□□□□ -2.39
Trav4-3A0A0B4J1K1 Mir6364-201ENSMUST00000183396 86 ntBASIC0.12□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm27898-201ENSMUST00000183987 80 ntBASIC0.12□□□□□ -2.39
Trav4-3A0A0B4J1K1 Mir7059-201ENSMUST00000184825 59 ntBASIC0.12□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm44828-201ENSMUST00000203745 106 ntBASIC0.12□□□□□ -2.39
Trav4-3A0A0B4J1K1 AC122225.1-201ENSMUST00000215641 369 ntBASIC0.12□□□□□ -2.39
Trav4-3A0A0B4J1K1 AC188459.1-201ENSMUST00000216651 300 ntBASIC0.12□□□□□ -2.39
Trav4-3A0A0B4J1K1 Gm23969-201ENSMUST00000083324 74 ntBASIC0.12□□□□□ -2.39
Trav4-3A0A0B4J1K1 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC0.11□□□□□ -2.39
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms