Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC4.21□□□□□ -1.73
Nubp1Q9R060 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Nubp1Q9R060 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Nubp1Q9R060 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Nubp1Q9R060 Gm43283-201ENSMUST00000199138 2548 ntBASIC4.21□□□□□ -1.74
Nubp1Q9R060 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
Nubp1Q9R060 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.21□□□□□ -1.74
Nubp1Q9R060 Gm26081-201ENSMUST00000104068 132 ntBASIC4.21□□□□□ -1.74
Nubp1Q9R060 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
Nubp1Q9R060 Gm14973-201ENSMUST00000117248 255 ntBASIC4.21□□□□□ -1.74
Nubp1Q9R060 Gm9119-201ENSMUST00000118866 495 ntBASIC4.21□□□□□ -1.74
Nubp1Q9R060 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC4.21□□□□□ -1.74
Nubp1Q9R060 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.21□□□□□ -1.74
Nubp1Q9R060 Gm24916-201ENSMUST00000157287 79 ntBASIC4.21□□□□□ -1.74
Nubp1Q9R060 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC4.21□□□□□ -1.74
Nubp1Q9R060 Gm43587-201ENSMUST00000199590 204 ntBASIC4.21□□□□□ -1.74
Nubp1Q9R060 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC4.21□□□□□ -1.74
Nubp1Q9R060 AC124524.1-201ENSMUST00000225833 181 ntBASIC4.21□□□□□ -1.74
Nubp1Q9R060 AC156790.5-201ENSMUST00000227075 231 ntBASIC4.21□□□□□ -1.74
Nubp1Q9R060 AC121898.1-201ENSMUST00000227599 288 ntBASIC4.21□□□□□ -1.74
Nubp1Q9R060 Gm23928-201ENSMUST00000082469 145 ntBASIC4.21□□□□□ -1.74
Nubp1Q9R060 Mir504-201ENSMUST00000093602 79 ntBASIC4.21□□□□□ -1.74
Nubp1Q9R060 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Nubp1Q9R060 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Nubp1Q9R060 Gm37655-201ENSMUST00000193968 4123 ntBASIC4.21□□□□□ -1.74
Nubp1Q9R060 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
Nubp1Q9R060 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Nubp1Q9R060 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Nubp1Q9R060 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Nubp1Q9R060 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Nubp1Q9R060 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
Nubp1Q9R060 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Nubp1Q9R060 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Nubp1Q9R060 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Nubp1Q9R060 Gm15357-201ENSMUST00000119160 285 ntBASIC4.2□□□□□ -1.74
Nubp1Q9R060 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC4.2□□□□□ -1.74
Nubp1Q9R060 Gm5762-201ENSMUST00000119204 258 ntBASIC4.2□□□□□ -1.74
Nubp1Q9R060 Gm25290-201ENSMUST00000122796 144 ntBASIC4.2□□□□□ -1.74
Nubp1Q9R060 Gm26360-201ENSMUST00000158872 103 ntBASIC4.2□□□□□ -1.74
Nubp1Q9R060 Mir5710-201ENSMUST00000176884 69 ntBASIC4.2□□□□□ -1.74
Nubp1Q9R060 Gm10292-201ENSMUST00000183142 581 ntBASIC4.2□□□□□ -1.74
Nubp1Q9R060 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC4.2□□□□□ -1.74
Nubp1Q9R060 Gm9442-201ENSMUST00000194242 319 ntBASIC4.2□□□□□ -1.74
Nubp1Q9R060 Gm24461-201ENSMUST00000082735 103 ntBASIC4.2□□□□□ -1.74
Nubp1Q9R060 Gm23723-201ENSMUST00000082996 132 ntBASIC4.2□□□□□ -1.74
Nubp1Q9R060 Snord22-201ENSMUST00000083153 126 ntBASIC4.2□□□□□ -1.74
Nubp1Q9R060 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Nubp1Q9R060 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Nubp1Q9R060 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Nubp1Q9R060 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Nubp1Q9R060 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Nubp1Q9R060 Gm42785-201ENSMUST00000202316 3835 ntBASIC4.2□□□□□ -1.74
Nubp1Q9R060 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Nubp1Q9R060 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.2□□□□□ -1.74
Nubp1Q9R060 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Nubp1Q9R060 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
Nubp1Q9R060 AC117199.1-201ENSMUST00000219940 3132 ntBASIC4.19□□□□□ -1.74
Nubp1Q9R060 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Nubp1Q9R060 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.19□□□□□ -1.74
Nubp1Q9R060 Gm37298-201ENSMUST00000193770 3868 ntBASIC4.19□□□□□ -1.74
Nubp1Q9R060 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Nubp1Q9R060 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Nubp1Q9R060 Gm15365-201ENSMUST00000122392 300 ntBASIC4.19□□□□□ -1.74
Nubp1Q9R060 Gm23183-201ENSMUST00000122595 323 ntBASIC4.19□□□□□ -1.74
Nubp1Q9R060 Gm22343-201ENSMUST00000122648 286 ntBASIC4.19□□□□□ -1.74
Nubp1Q9R060 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC4.19□□□□□ -1.74
Nubp1Q9R060 Gm25923-201ENSMUST00000158312 138 ntBASIC4.19□□□□□ -1.74
Nubp1Q9R060 Gm43676-201ENSMUST00000197532 540 ntBASIC4.19□□□□□ -1.74
Nubp1Q9R060 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC4.19□□□□□ -1.74
Nubp1Q9R060 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC4.19□□□□□ -1.74
Nubp1Q9R060 Gm44650-201ENSMUST00000206929 194 ntBASIC4.19□□□□□ -1.74
Nubp1Q9R060 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Nubp1Q9R060 AC161269.1-201ENSMUST00000228426 318 ntBASIC4.19□□□□□ -1.74
Nubp1Q9R060 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Nubp1Q9R060 Mir338-201ENSMUST00000083666 98 ntBASIC4.19□□□□□ -1.74
Nubp1Q9R060 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Nubp1Q9R060 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC4.19□□□□□ -1.74
Nubp1Q9R060 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
Nubp1Q9R060 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Nubp1Q9R060 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Nubp1Q9R060 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Nubp1Q9R060 Gm25380-201ENSMUST00000175463 107 ntBASIC4.18□□□□□ -1.74
Nubp1Q9R060 Gm24641-201ENSMUST00000178055 107 ntBASIC4.18□□□□□ -1.74
Nubp1Q9R060 Gm25484-201ENSMUST00000178217 107 ntBASIC4.18□□□□□ -1.74
Nubp1Q9R060 Gm26138-201ENSMUST00000179236 107 ntBASIC4.18□□□□□ -1.74
Nubp1Q9R060 Gm22821-201ENSMUST00000179288 107 ntBASIC4.18□□□□□ -1.74
Nubp1Q9R060 Gm26828-201ENSMUST00000180640 172 ntBASIC4.18□□□□□ -1.74
Nubp1Q9R060 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.18□□□□□ -1.74
Nubp1Q9R060 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC4.18□□□□□ -1.74
Nubp1Q9R060 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Nubp1Q9R060 Gm23140-201ENSMUST00000082487 107 ntBASIC4.18□□□□□ -1.74
Nubp1Q9R060 Gm25589-201ENSMUST00000082502 166 ntBASIC4.18□□□□□ -1.74
Nubp1Q9R060 Gm22509-201ENSMUST00000082775 107 ntBASIC4.18□□□□□ -1.74
Nubp1Q9R060 Gm23298-201ENSMUST00000083181 107 ntBASIC4.18□□□□□ -1.74
Nubp1Q9R060 Gm24614-201ENSMUST00000083269 107 ntBASIC4.18□□□□□ -1.74
Nubp1Q9R060 Gm23264-201ENSMUST00000083372 107 ntBASIC4.18□□□□□ -1.74
Nubp1Q9R060 Gm22057-201ENSMUST00000083387 107 ntBASIC4.18□□□□□ -1.74
Nubp1Q9R060 Gm22576-201ENSMUST00000083733 104 ntBASIC4.18□□□□□ -1.74
Nubp1Q9R060 Gm25516-201ENSMUST00000083857 107 ntBASIC4.18□□□□□ -1.74
Nubp1Q9R060 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms