Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm25488-201ENSMUST00000158728 118 ntBASIC1.94□□□□□ -2.1
Upk3aQ9JKX8 Gm8532-201ENSMUST00000179174 461 ntBASIC1.94□□□□□ -2.1
Upk3aQ9JKX8 Gm22631-201ENSMUST00000179656 94 ntBASIC1.94□□□□□ -2.1
Upk3aQ9JKX8 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Upk3aQ9JKX8 Mir6370-201ENSMUST00000183510 120 ntBASIC1.94□□□□□ -2.1
Upk3aQ9JKX8 Gm18185-201ENSMUST00000186725 667 ntBASIC1.94□□□□□ -2.1
Upk3aQ9JKX8 Gm18296-201ENSMUST00000192475 783 ntBASIC1.94□□□□□ -2.1
Upk3aQ9JKX8 Gm37869-201ENSMUST00000193385 595 ntBASIC1.94□□□□□ -2.1
Upk3aQ9JKX8 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC1.94□□□□□ -2.1
Upk3aQ9JKX8 Gm18774-201ENSMUST00000218269 601 ntBASIC1.94□□□□□ -2.1
Upk3aQ9JKX8 AC159203.2-201ENSMUST00000221326 193 ntBASIC1.94□□□□□ -2.1
Upk3aQ9JKX8 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Upk3aQ9JKX8 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
Upk3aQ9JKX8 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC1.93□□□□□ -2.1
Upk3aQ9JKX8 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
Upk3aQ9JKX8 Gm12765-201ENSMUST00000117273 615 ntBASIC1.93□□□□□ -2.1
Upk3aQ9JKX8 Gm15183-201ENSMUST00000118933 348 ntBASIC1.93□□□□□ -2.1
Upk3aQ9JKX8 Gm11991-201ENSMUST00000119652 1074 ntBASIC1.93□□□□□ -2.1
Upk3aQ9JKX8 Gm25052-201ENSMUST00000122661 158 ntBASIC1.93□□□□□ -2.1
Upk3aQ9JKX8 n-R5s189-201ENSMUST00000122675 114 ntBASIC1.93□□□□□ -2.1
Upk3aQ9JKX8 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Upk3aQ9JKX8 Gm24478-201ENSMUST00000157439 158 ntBASIC1.93□□□□□ -2.1
Upk3aQ9JKX8 Gm26393-201ENSMUST00000157625 129 ntBASIC1.93□□□□□ -2.1
Upk3aQ9JKX8 Gm25335-201ENSMUST00000158043 103 ntBASIC1.93□□□□□ -2.1
Upk3aQ9JKX8 Gm25368-201ENSMUST00000158847 131 ntBASIC1.93□□□□□ -2.1
Upk3aQ9JKX8 Gm23548-201ENSMUST00000158963 106 ntBASIC1.93□□□□□ -2.1
Upk3aQ9JKX8 Gm25243-201ENSMUST00000174912 207 ntBASIC1.93□□□□□ -2.1
Upk3aQ9JKX8 Gm25996-201ENSMUST00000175393 117 ntBASIC1.93□□□□□ -2.1
Upk3aQ9JKX8 Gm27660-201ENSMUST00000184028 208 ntBASIC1.93□□□□□ -2.1
Upk3aQ9JKX8 Mir7j-201ENSMUST00000184427 122 ntBASIC1.93□□□□□ -2.1
Upk3aQ9JKX8 Gm28404-201ENSMUST00000190242 453 ntBASIC1.93□□□□□ -2.1
Upk3aQ9JKX8 Ighv12-1-201ENSMUST00000195542 329 ntBASIC1.93□□□□□ -2.1
Upk3aQ9JKX8 AC134334.1-201ENSMUST00000214277 255 ntBASIC1.93□□□□□ -2.1
Upk3aQ9JKX8 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC1.93□□□□□ -2.1
Upk3aQ9JKX8 CT025538.2-201ENSMUST00000226083 772 ntBASIC1.93□□□□□ -2.1
Upk3aQ9JKX8 AC135292.1-201ENSMUST00000227665 204 ntBASIC1.93□□□□□ -2.1
Upk3aQ9JKX8 Gm25402-201ENSMUST00000082966 131 ntBASIC1.93□□□□□ -2.1
Upk3aQ9JKX8 Mir222-201ENSMUST00000083537 79 ntBASIC1.93□□□□□ -2.1
Upk3aQ9JKX8 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
Upk3aQ9JKX8 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Upk3aQ9JKX8 Gm43753-201ENSMUST00000196539 3309 ntBASIC1.92□□□□□ -2.1
Upk3aQ9JKX8 Gm15314-201ENSMUST00000120740 1887 ntBASIC1.92□□□□□ -2.1
Upk3aQ9JKX8 Gm37895-201ENSMUST00000192448 4550 ntBASIC1.92□□□□□ -2.1
Upk3aQ9JKX8 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
Upk3aQ9JKX8 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Upk3aQ9JKX8 n-R5s202-201ENSMUST00000104517 114 ntBASIC1.92□□□□□ -2.1
Upk3aQ9JKX8 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC1.92□□□□□ -2.1
Upk3aQ9JKX8 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC1.92□□□□□ -2.1
Upk3aQ9JKX8 Gm22668-201ENSMUST00000158716 260 ntBASIC1.92□□□□□ -2.1
Upk3aQ9JKX8 Gm22264-201ENSMUST00000178200 107 ntBASIC1.92□□□□□ -2.1
Upk3aQ9JKX8 Gm22166-201ENSMUST00000178419 121 ntBASIC1.92□□□□□ -2.1
Upk3aQ9JKX8 Gm23288-201ENSMUST00000179213 121 ntBASIC1.92□□□□□ -2.1
Upk3aQ9JKX8 Gm23862-201ENSMUST00000180342 94 ntBASIC1.92□□□□□ -2.1
Upk3aQ9JKX8 Gm9022-202ENSMUST00000183285 483 ntBASIC1.92□□□□□ -2.1
Upk3aQ9JKX8 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC1.92□□□□□ -2.1
Upk3aQ9JKX8 Mir6376-201ENSMUST00000185149 131 ntBASIC1.92□□□□□ -2.1
Upk3aQ9JKX8 Gm29604-201ENSMUST00000187176 163 ntBASIC1.92□□□□□ -2.1
Upk3aQ9JKX8 Gm45240-201ENSMUST00000211437 674 ntBASIC1.92□□□□□ -2.1
Upk3aQ9JKX8 Gm35558-203ENSMUST00000222264 204 ntBASIC1.92□□□□□ -2.1
Upk3aQ9JKX8 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
Upk3aQ9JKX8 Snord38a-201ENSMUST00000083746 71 ntBASIC1.92□□□□□ -2.1
Upk3aQ9JKX8 Gm23040-201ENSMUST00000083869 163 ntBASIC1.92□□□□□ -2.1
Upk3aQ9JKX8 Gm42664-201ENSMUST00000199417 3239 ntBASIC1.92□□□□□ -2.1
Upk3aQ9JKX8 Gm19428-201ENSMUST00000220512 1995 ntBASIC1.92□□□□□ -2.1
Upk3aQ9JKX8 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC1.91□□□□□ -2.1
Upk3aQ9JKX8 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Upk3aQ9JKX8 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Upk3aQ9JKX8 Gm15844-201ENSMUST00000118016 576 ntBASIC1.91□□□□□ -2.1
Upk3aQ9JKX8 Gm13720-201ENSMUST00000120741 196 ntBASIC1.91□□□□□ -2.1
Upk3aQ9JKX8 Gm24601-201ENSMUST00000157970 143 ntBASIC1.91□□□□□ -2.1
Upk3aQ9JKX8 Gm24846-201ENSMUST00000158033 108 ntBASIC1.91□□□□□ -2.1
Upk3aQ9JKX8 Gm6660-201ENSMUST00000179149 468 ntBASIC1.91□□□□□ -2.1
Upk3aQ9JKX8 Gm24518-201ENSMUST00000180275 94 ntBASIC1.91□□□□□ -2.1
Upk3aQ9JKX8 Gm27979-201ENSMUST00000185126 56 ntBASIC1.91□□□□□ -2.1
Upk3aQ9JKX8 Gm28838-201ENSMUST00000186338 315 ntBASIC1.91□□□□□ -2.1
Upk3aQ9JKX8 Gm29635-201ENSMUST00000187221 315 ntBASIC1.91□□□□□ -2.1
Upk3aQ9JKX8 Gm29026-201ENSMUST00000187787 315 ntBASIC1.91□□□□□ -2.1
Upk3aQ9JKX8 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC1.91□□□□□ -2.1
Upk3aQ9JKX8 Gm28797-201ENSMUST00000188543 315 ntBASIC1.91□□□□□ -2.1
Upk3aQ9JKX8 Gm28855-201ENSMUST00000188680 315 ntBASIC1.91□□□□□ -2.1
Upk3aQ9JKX8 Gm28705-201ENSMUST00000189548 315 ntBASIC1.91□□□□□ -2.1
Upk3aQ9JKX8 Gm28939-201ENSMUST00000190351 315 ntBASIC1.91□□□□□ -2.1
Upk3aQ9JKX8 Gm28223-201ENSMUST00000190469 315 ntBASIC1.91□□□□□ -2.1
Upk3aQ9JKX8 Gm29092-201ENSMUST00000190768 315 ntBASIC1.91□□□□□ -2.1
Upk3aQ9JKX8 Gm9236-201ENSMUST00000196892 587 ntBASIC1.91□□□□□ -2.1
Upk3aQ9JKX8 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC1.91□□□□□ -2.1
Upk3aQ9JKX8 Mir7217-201ENSMUST00000200304 62 ntBASIC1.91□□□□□ -2.1
Upk3aQ9JKX8 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC1.91□□□□□ -2.1
Upk3aQ9JKX8 Gm9318-201ENSMUST00000222444 438 ntBASIC1.91□□□□□ -2.1
Upk3aQ9JKX8 Mir322-201ENSMUST00000083484 95 ntBASIC1.91□□□□□ -2.1
Upk3aQ9JKX8 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Upk3aQ9JKX8 Gm24582-201ENSMUST00000103967 103 ntBASIC1.9□□□□□ -2.11
Upk3aQ9JKX8 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Upk3aQ9JKX8 Gm25507-201ENSMUST00000116981 144 ntBASIC1.9□□□□□ -2.11
Upk3aQ9JKX8 Gm12550-201ENSMUST00000118478 329 ntBASIC1.9□□□□□ -2.11
Upk3aQ9JKX8 Gm14013-201ENSMUST00000119006 270 ntBASIC1.9□□□□□ -2.11
Upk3aQ9JKX8 Gm11410-201ENSMUST00000120053 1143 ntBASIC1.9□□□□□ -2.11
Upk3aQ9JKX8 Gm7916-201ENSMUST00000120325 456 ntBASIC1.9□□□□□ -2.11
Upk3aQ9JKX8 Gm9225-201ENSMUST00000121921 836 ntBASIC1.9□□□□□ -2.11
Upk3aQ9JKX8 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC1.9□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms