Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm25162-201ENSMUST00000158906 159 ntBASIC3.06□□□□□ -1.92
Trim54Q9ERP3 Gm6660-201ENSMUST00000179149 468 ntBASIC3.06□□□□□ -1.92
Trim54Q9ERP3 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC3.06□□□□□ -1.92
Trim54Q9ERP3 Mir6402-201ENSMUST00000183406 80 ntBASIC3.06□□□□□ -1.92
Trim54Q9ERP3 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC3.06□□□□□ -1.92
Trim54Q9ERP3 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.06□□□□□ -1.92
Trim54Q9ERP3 Gm28825-201ENSMUST00000186233 238 ntBASIC3.06□□□□□ -1.92
Trim54Q9ERP3 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Trim54Q9ERP3 Gm37313-201ENSMUST00000191673 290 ntBASIC3.06□□□□□ -1.92
Trim54Q9ERP3 Gm36944-201ENSMUST00000192257 2759 ntBASIC3.06□□□□□ -1.92
Trim54Q9ERP3 Trav15n-3-201ENSMUST00000200498 168 ntBASIC3.06□□□□□ -1.92
Trim54Q9ERP3 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC3.06□□□□□ -1.92
Trim54Q9ERP3 AC123803.1-201ENSMUST00000216093 189 ntBASIC3.06□□□□□ -1.92
Trim54Q9ERP3 CT572985.2-201ENSMUST00000220496 211 ntBASIC3.06□□□□□ -1.92
Trim54Q9ERP3 Gm25801-201ENSMUST00000082638 106 ntBASIC3.06□□□□□ -1.92
Trim54Q9ERP3 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Trim54Q9ERP3 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Trim54Q9ERP3 Gm37941-201ENSMUST00000192170 2309 ntBASIC3.05□□□□□ -1.92
Trim54Q9ERP3 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Trim54Q9ERP3 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
Trim54Q9ERP3 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Trim54Q9ERP3 Gm23128-201ENSMUST00000104257 132 ntBASIC3.05□□□□□ -1.92
Trim54Q9ERP3 Gm26247-201ENSMUST00000116702 91 ntBASIC3.05□□□□□ -1.92
Trim54Q9ERP3 Gm22032-201ENSMUST00000116946 116 ntBASIC3.05□□□□□ -1.92
Trim54Q9ERP3 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC3.05□□□□□ -1.92
Trim54Q9ERP3 Mir1942-201ENSMUST00000157274 63 ntBASIC3.05□□□□□ -1.92
Trim54Q9ERP3 Gm23713-201ENSMUST00000157353 70 ntBASIC3.05□□□□□ -1.92
Trim54Q9ERP3 Gm22961-201ENSMUST00000157964 106 ntBASIC3.05□□□□□ -1.92
Trim54Q9ERP3 Gm22615-201ENSMUST00000158102 70 ntBASIC3.05□□□□□ -1.92
Trim54Q9ERP3 Gm37361-201ENSMUST00000194345 132 ntBASIC3.05□□□□□ -1.92
Trim54Q9ERP3 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.05□□□□□ -1.92
Trim54Q9ERP3 Gm23128-202ENSMUST00000196578 133 ntBASIC3.05□□□□□ -1.92
Trim54Q9ERP3 Gm45315-201ENSMUST00000209283 333 ntBASIC3.05□□□□□ -1.92
Trim54Q9ERP3 CT025602.1-201ENSMUST00000227281 382 ntBASIC3.05□□□□□ -1.92
Trim54Q9ERP3 AC163646.2-201ENSMUST00000227962 141 ntBASIC3.05□□□□□ -1.92
Trim54Q9ERP3 Gm10298-201ENSMUST00000074801 265 ntBASIC3.05□□□□□ -1.92
Trim54Q9ERP3 Snord42a-201ENSMUST00000082606 65 ntBASIC3.05□□□□□ -1.92
Trim54Q9ERP3 Gm25929-201ENSMUST00000082784 107 ntBASIC3.05□□□□□ -1.92
Trim54Q9ERP3 Gm26066-201ENSMUST00000083385 109 ntBASIC3.05□□□□□ -1.92
Trim54Q9ERP3 Snord14d-201ENSMUST00000083424 86 ntBASIC3.05□□□□□ -1.92
Trim54Q9ERP3 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Trim54Q9ERP3 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Trim54Q9ERP3 AC117226.1-201ENSMUST00000221635 3737 ntBASIC3.05□□□□□ -1.92
Trim54Q9ERP3 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.05□□□□□ -1.92
Trim54Q9ERP3 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Trim54Q9ERP3 Gm5596-201ENSMUST00000207988 2421 ntBASIC3.04□□□□□ -1.92
Trim54Q9ERP3 Gm37661-201ENSMUST00000191863 1550 ntBASIC3.04□□□□□ -1.92
Trim54Q9ERP3 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
Trim54Q9ERP3 Gm25808-201ENSMUST00000122784 284 ntBASIC3.04□□□□□ -1.92
Trim54Q9ERP3 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trim54Q9ERP3 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC3.04□□□□□ -1.92
Trim54Q9ERP3 Gm16218-201ENSMUST00000155424 388 ntBASIC3.04□□□□□ -1.92
Trim54Q9ERP3 Gm22434-201ENSMUST00000158549 122 ntBASIC3.04□□□□□ -1.92
Trim54Q9ERP3 Gm22435-201ENSMUST00000158552 128 ntBASIC3.04□□□□□ -1.92
Trim54Q9ERP3 Gm8580-201ENSMUST00000160295 464 ntBASIC3.04□□□□□ -1.92
Trim54Q9ERP3 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC3.04□□□□□ -1.92
Trim54Q9ERP3 Gm27379-201ENSMUST00000183730 123 ntBASIC3.04□□□□□ -1.92
Trim54Q9ERP3 Gm27698-201ENSMUST00000184060 249 ntBASIC3.04□□□□□ -1.92
Trim54Q9ERP3 Gm28740-201ENSMUST00000186142 215 ntBASIC3.04□□□□□ -1.92
Trim54Q9ERP3 Gm37616-201ENSMUST00000193974 322 ntBASIC3.04□□□□□ -1.92
Trim54Q9ERP3 Gm45375-201ENSMUST00000210338 280 ntBASIC3.04□□□□□ -1.92
Trim54Q9ERP3 Gm45452-201ENSMUST00000210905 177 ntBASIC3.04□□□□□ -1.92
Trim54Q9ERP3 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC3.04□□□□□ -1.92
Trim54Q9ERP3 AC132954.1-201ENSMUST00000221017 342 ntBASIC3.04□□□□□ -1.92
Trim54Q9ERP3 AC122484.1-201ENSMUST00000221578 177 ntBASIC3.04□□□□□ -1.92
Trim54Q9ERP3 Gm33654-201ENSMUST00000221704 215 ntBASIC3.04□□□□□ -1.92
Trim54Q9ERP3 Gm21937-201ENSMUST00000222825 218 ntBASIC3.04□□□□□ -1.92
Trim54Q9ERP3 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Trim54Q9ERP3 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Trim54Q9ERP3 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Trim54Q9ERP3 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trim54Q9ERP3 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trim54Q9ERP3 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Trim54Q9ERP3 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Trim54Q9ERP3 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Trim54Q9ERP3 Gm25054-201ENSMUST00000157370 97 ntBASIC3.03□□□□□ -1.92
Trim54Q9ERP3 Gm24997-201ENSMUST00000157910 105 ntBASIC3.03□□□□□ -1.92
Trim54Q9ERP3 Gm22085-201ENSMUST00000158344 110 ntBASIC3.03□□□□□ -1.92
Trim54Q9ERP3 Gm7953-201ENSMUST00000168278 469 ntBASIC3.03□□□□□ -1.92
Trim54Q9ERP3 Gm25671-201ENSMUST00000178612 105 ntBASIC3.03□□□□□ -1.92
Trim54Q9ERP3 Gm23307-201ENSMUST00000179167 105 ntBASIC3.03□□□□□ -1.92
Trim54Q9ERP3 Gm25286-201ENSMUST00000179790 105 ntBASIC3.03□□□□□ -1.92
Trim54Q9ERP3 Gm27796-201ENSMUST00000183863 261 ntBASIC3.03□□□□□ -1.92
Trim54Q9ERP3 Gm27700-201ENSMUST00000185003 81 ntBASIC3.03□□□□□ -1.92
Trim54Q9ERP3 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC3.03□□□□□ -1.92
Trim54Q9ERP3 Gm28629-201ENSMUST00000187309 263 ntBASIC3.03□□□□□ -1.92
Trim54Q9ERP3 Gm19777-201ENSMUST00000191940 358 ntBASIC3.03□□□□□ -1.92
Trim54Q9ERP3 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC3.03□□□□□ -1.92
Trim54Q9ERP3 Gm23370-202ENSMUST00000197008 129 ntBASIC3.03□□□□□ -1.92
Trim54Q9ERP3 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC3.03□□□□□ -1.92
Trim54Q9ERP3 Gm43901-201ENSMUST00000203247 453 ntBASIC3.03□□□□□ -1.92
Trim54Q9ERP3 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC3.03□□□□□ -1.92
Trim54Q9ERP3 AC147240.1-201ENSMUST00000218767 431 ntBASIC3.03□□□□□ -1.92
Trim54Q9ERP3 Gm45815-201ENSMUST00000220241 146 ntBASIC3.03□□□□□ -1.92
Trim54Q9ERP3 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC3.03□□□□□ -1.92
Trim54Q9ERP3 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC3.03□□□□□ -1.92
Trim54Q9ERP3 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.03□□□□□ -1.92
Trim54Q9ERP3 n-R5s176-201ENSMUST00000082683 109 ntBASIC3.03□□□□□ -1.92
Trim54Q9ERP3 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Trim54Q9ERP3 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms