Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC4.11□□□□□ -1.75
Upf1Q9EPU0 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC4.11□□□□□ -1.75
Upf1Q9EPU0 AC130477.2-201ENSMUST00000228158 274 ntBASIC4.11□□□□□ -1.75
Upf1Q9EPU0 Gm24316-201ENSMUST00000083041 107 ntBASIC4.11□□□□□ -1.75
Upf1Q9EPU0 Mir133a-1-201ENSMUST00000083465 68 ntBASIC4.11□□□□□ -1.75
Upf1Q9EPU0 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.11□□□□□ -1.75
Upf1Q9EPU0 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Upf1Q9EPU0 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Upf1Q9EPU0 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Upf1Q9EPU0 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Upf1Q9EPU0 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Upf1Q9EPU0 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Upf1Q9EPU0 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.1□□□□□ -1.75
Upf1Q9EPU0 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Upf1Q9EPU0 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Upf1Q9EPU0 Gm24671-201ENSMUST00000104159 158 ntBASIC4.1□□□□□ -1.75
Upf1Q9EPU0 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Upf1Q9EPU0 Gm11572-201ENSMUST00000119164 120 ntBASIC4.1□□□□□ -1.75
Upf1Q9EPU0 Gm12771-201ENSMUST00000120246 135 ntBASIC4.1□□□□□ -1.75
Upf1Q9EPU0 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC4.1□□□□□ -1.75
Upf1Q9EPU0 Gm15733-201ENSMUST00000132957 242 ntBASIC4.1□□□□□ -1.75
Upf1Q9EPU0 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC4.1□□□□□ -1.75
Upf1Q9EPU0 Gm22447-201ENSMUST00000158155 92 ntBASIC4.1□□□□□ -1.75
Upf1Q9EPU0 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC4.1□□□□□ -1.75
Upf1Q9EPU0 Gm25198-201ENSMUST00000178574 110 ntBASIC4.1□□□□□ -1.75
Upf1Q9EPU0 Gm28849-201ENSMUST00000188127 174 ntBASIC4.1□□□□□ -1.75
Upf1Q9EPU0 Gm28330-201ENSMUST00000190353 171 ntBASIC4.1□□□□□ -1.75
Upf1Q9EPU0 Gm42570-201ENSMUST00000195937 292 ntBASIC4.1□□□□□ -1.75
Upf1Q9EPU0 AC164161.1-201ENSMUST00000214076 639 ntBASIC4.1□□□□□ -1.75
Upf1Q9EPU0 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC4.1□□□□□ -1.75
Upf1Q9EPU0 Gm9818-201ENSMUST00000050900 255 ntBASIC4.1□□□□□ -1.75
Upf1Q9EPU0 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Upf1Q9EPU0 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
Upf1Q9EPU0 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Upf1Q9EPU0 Gm15102-201ENSMUST00000118740 1502 ntBASIC4.1□□□□□ -1.75
Upf1Q9EPU0 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Upf1Q9EPU0 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Upf1Q9EPU0 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Upf1Q9EPU0 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Upf1Q9EPU0 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
Upf1Q9EPU0 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Upf1Q9EPU0 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
Upf1Q9EPU0 Gm22939-201ENSMUST00000103958 131 ntBASIC4.09□□□□□ -1.75
Upf1Q9EPU0 Gm13504-201ENSMUST00000117490 316 ntBASIC4.09□□□□□ -1.75
Upf1Q9EPU0 Gm13355-201ENSMUST00000117996 317 ntBASIC4.09□□□□□ -1.75
Upf1Q9EPU0 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC4.09□□□□□ -1.75
Upf1Q9EPU0 Gm23713-201ENSMUST00000157353 70 ntBASIC4.09□□□□□ -1.75
Upf1Q9EPU0 Gm22615-201ENSMUST00000158102 70 ntBASIC4.09□□□□□ -1.75
Upf1Q9EPU0 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC4.09□□□□□ -1.75
Upf1Q9EPU0 Gm25450-201ENSMUST00000179144 107 ntBASIC4.09□□□□□ -1.75
Upf1Q9EPU0 Gm44521-201ENSMUST00000206469 217 ntBASIC4.09□□□□□ -1.75
Upf1Q9EPU0 Gm45879-201ENSMUST00000212521 392 ntBASIC4.09□□□□□ -1.75
Upf1Q9EPU0 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.09□□□□□ -1.75
Upf1Q9EPU0 Snord35b-201ENSMUST00000082833 87 ntBASIC4.09□□□□□ -1.75
Upf1Q9EPU0 Mir215-201ENSMUST00000083628 112 ntBASIC4.09□□□□□ -1.75
Upf1Q9EPU0 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Upf1Q9EPU0 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Upf1Q9EPU0 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Upf1Q9EPU0 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
Upf1Q9EPU0 Gm15010-201ENSMUST00000117153 407 ntBASIC4.08□□□□□ -1.76
Upf1Q9EPU0 Gm13687-201ENSMUST00000119857 282 ntBASIC4.08□□□□□ -1.76
Upf1Q9EPU0 Gm25270-201ENSMUST00000122606 138 ntBASIC4.08□□□□□ -1.76
Upf1Q9EPU0 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Upf1Q9EPU0 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC4.08□□□□□ -1.76
Upf1Q9EPU0 Gm25749-201ENSMUST00000175485 111 ntBASIC4.08□□□□□ -1.76
Upf1Q9EPU0 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC4.08□□□□□ -1.76
Upf1Q9EPU0 Gm6842-201ENSMUST00000211361 390 ntBASIC4.08□□□□□ -1.76
Upf1Q9EPU0 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC4.08□□□□□ -1.76
Upf1Q9EPU0 AC155715.1-201ENSMUST00000213575 463 ntBASIC4.08□□□□□ -1.76
Upf1Q9EPU0 AC155712.1-201ENSMUST00000219704 160 ntBASIC4.08□□□□□ -1.76
Upf1Q9EPU0 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC4.08□□□□□ -1.76
Upf1Q9EPU0 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Upf1Q9EPU0 Gm22245-201ENSMUST00000082479 103 ntBASIC4.08□□□□□ -1.76
Upf1Q9EPU0 Gm22620-201ENSMUST00000082700 133 ntBASIC4.08□□□□□ -1.76
Upf1Q9EPU0 Mir208a-201ENSMUST00000083498 83 ntBASIC4.08□□□□□ -1.76
Upf1Q9EPU0 Gm25651-201ENSMUST00000083782 119 ntBASIC4.08□□□□□ -1.76
Upf1Q9EPU0 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.08□□□□□ -1.76
Upf1Q9EPU0 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Upf1Q9EPU0 Gm45540-201ENSMUST00000209271 3606 ntBASIC4.08□□□□□ -1.76
Upf1Q9EPU0 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Upf1Q9EPU0 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Upf1Q9EPU0 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
Upf1Q9EPU0 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Upf1Q9EPU0 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Upf1Q9EPU0 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Upf1Q9EPU0 Gm23063-201ENSMUST00000102350 93 ntBASIC4.07□□□□□ -1.76
Upf1Q9EPU0 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Upf1Q9EPU0 Mir344c-201ENSMUST00000103919 92 ntBASIC4.07□□□□□ -1.76
Upf1Q9EPU0 Gm24119-201ENSMUST00000103979 246 ntBASIC4.07□□□□□ -1.76
Upf1Q9EPU0 Gm12782-201ENSMUST00000117519 727 ntBASIC4.07□□□□□ -1.76
Upf1Q9EPU0 Gm15190-201ENSMUST00000120855 276 ntBASIC4.07□□□□□ -1.76
Upf1Q9EPU0 Gm22322-201ENSMUST00000157151 111 ntBASIC4.07□□□□□ -1.76
Upf1Q9EPU0 Gm26028-201ENSMUST00000158660 294 ntBASIC4.07□□□□□ -1.76
Upf1Q9EPU0 Gm20672-201ENSMUST00000176605 261 ntBASIC4.07□□□□□ -1.76
Upf1Q9EPU0 Gm20630-201ENSMUST00000177387 551 ntBASIC4.07□□□□□ -1.76
Upf1Q9EPU0 Gm27505-201ENSMUST00000185071 110 ntBASIC4.07□□□□□ -1.76
Upf1Q9EPU0 Gm28921-201ENSMUST00000190219 378 ntBASIC4.07□□□□□ -1.76
Upf1Q9EPU0 Igkv9-128-201ENSMUST00000196602 353 ntBASIC4.07□□□□□ -1.76
Upf1Q9EPU0 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC4.07□□□□□ -1.76
Upf1Q9EPU0 AC125374.2-201ENSMUST00000214278 162 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms