Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 AC155921.1-201ENSMUST00000216568 3841 ntBASIC3.4□□□□□ -1.87
Cldnd1Q9CQX5 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Cldnd1Q9CQX5 Gm22979-201ENSMUST00000082609 159 ntBASIC3.4□□□□□ -1.87
Cldnd1Q9CQX5 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
Cldnd1Q9CQX5 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.4□□□□□ -1.87
Cldnd1Q9CQX5 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
Cldnd1Q9CQX5 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Cldnd1Q9CQX5 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
Cldnd1Q9CQX5 Gm25565-201ENSMUST00000104605 105 ntBASIC3.39□□□□□ -1.87
Cldnd1Q9CQX5 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Cldnd1Q9CQX5 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Cldnd1Q9CQX5 Gm13967-201ENSMUST00000120404 380 ntBASIC3.39□□□□□ -1.87
Cldnd1Q9CQX5 Gm15244-201ENSMUST00000121122 130 ntBASIC3.39□□□□□ -1.87
Cldnd1Q9CQX5 Gm14629-201ENSMUST00000122428 144 ntBASIC3.39□□□□□ -1.87
Cldnd1Q9CQX5 Gm22389-201ENSMUST00000158193 301 ntBASIC3.39□□□□□ -1.87
Cldnd1Q9CQX5 Gm22521-201ENSMUST00000158272 134 ntBASIC3.39□□□□□ -1.87
Cldnd1Q9CQX5 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.39□□□□□ -1.87
Cldnd1Q9CQX5 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC3.39□□□□□ -1.87
Cldnd1Q9CQX5 Gm38060-201ENSMUST00000194822 464 ntBASIC3.39□□□□□ -1.87
Cldnd1Q9CQX5 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC3.39□□□□□ -1.87
Cldnd1Q9CQX5 Gm32222-201ENSMUST00000203296 298 ntBASIC3.39□□□□□ -1.87
Cldnd1Q9CQX5 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC3.39□□□□□ -1.87
Cldnd1Q9CQX5 Gm44519-201ENSMUST00000206486 122 ntBASIC3.39□□□□□ -1.87
Cldnd1Q9CQX5 Gm46389-201ENSMUST00000223199 392 ntBASIC3.39□□□□□ -1.87
Cldnd1Q9CQX5 AC130477.2-201ENSMUST00000228158 274 ntBASIC3.39□□□□□ -1.87
Cldnd1Q9CQX5 Gm24042-201ENSMUST00000083114 103 ntBASIC3.39□□□□□ -1.87
Cldnd1Q9CQX5 Gm26166-201ENSMUST00000083788 107 ntBASIC3.39□□□□□ -1.87
Cldnd1Q9CQX5 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Cldnd1Q9CQX5 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.39□□□□□ -1.87
Cldnd1Q9CQX5 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
Cldnd1Q9CQX5 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.39□□□□□ -1.87
Cldnd1Q9CQX5 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Cldnd1Q9CQX5 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
Cldnd1Q9CQX5 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Cldnd1Q9CQX5 Gm14792-201ENSMUST00000119725 258 ntBASIC3.38□□□□□ -1.87
Cldnd1Q9CQX5 Gm13424-201ENSMUST00000122301 354 ntBASIC3.38□□□□□ -1.87
Cldnd1Q9CQX5 Gm25107-201ENSMUST00000122472 129 ntBASIC3.38□□□□□ -1.87
Cldnd1Q9CQX5 Gm22988-201ENSMUST00000122759 144 ntBASIC3.38□□□□□ -1.87
Cldnd1Q9CQX5 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC3.38□□□□□ -1.87
Cldnd1Q9CQX5 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.38□□□□□ -1.87
Cldnd1Q9CQX5 Gm24691-201ENSMUST00000157762 140 ntBASIC3.38□□□□□ -1.87
Cldnd1Q9CQX5 Gm22532-201ENSMUST00000158822 140 ntBASIC3.38□□□□□ -1.87
Cldnd1Q9CQX5 Gm27893-201ENSMUST00000184408 194 ntBASIC3.38□□□□□ -1.87
Cldnd1Q9CQX5 Igkv15-102-201ENSMUST00000197885 287 ntBASIC3.38□□□□□ -1.87
Cldnd1Q9CQX5 Gm24350-202ENSMUST00000198309 132 ntBASIC3.38□□□□□ -1.87
Cldnd1Q9CQX5 Gm43600-201ENSMUST00000202134 223 ntBASIC3.38□□□□□ -1.87
Cldnd1Q9CQX5 Gm44703-201ENSMUST00000205724 248 ntBASIC3.38□□□□□ -1.87
Cldnd1Q9CQX5 Gm45296-201ENSMUST00000209625 205 ntBASIC3.38□□□□□ -1.87
Cldnd1Q9CQX5 Gm45317-201ENSMUST00000210385 223 ntBASIC3.38□□□□□ -1.87
Cldnd1Q9CQX5 Gm46233-201ENSMUST00000217831 449 ntBASIC3.38□□□□□ -1.87
Cldnd1Q9CQX5 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC3.38□□□□□ -1.87
Cldnd1Q9CQX5 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Cldnd1Q9CQX5 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Cldnd1Q9CQX5 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
Cldnd1Q9CQX5 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Cldnd1Q9CQX5 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Cldnd1Q9CQX5 Gm7123-201ENSMUST00000117647 213 ntBASIC3.37□□□□□ -1.87
Cldnd1Q9CQX5 Gm15896-201ENSMUST00000118045 440 ntBASIC3.37□□□□□ -1.87
Cldnd1Q9CQX5 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.37□□□□□ -1.87
Cldnd1Q9CQX5 Gm24630-201ENSMUST00000122768 106 ntBASIC3.37□□□□□ -1.87
Cldnd1Q9CQX5 Gm24909-201ENSMUST00000157290 280 ntBASIC3.37□□□□□ -1.87
Cldnd1Q9CQX5 Snord92-201ENSMUST00000175548 85 ntBASIC3.37□□□□□ -1.87
Cldnd1Q9CQX5 Gm44320-201ENSMUST00000199276 86 ntBASIC3.37□□□□□ -1.87
Cldnd1Q9CQX5 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC3.37□□□□□ -1.87
Cldnd1Q9CQX5 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.37□□□□□ -1.87
Cldnd1Q9CQX5 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC3.37□□□□□ -1.87
Cldnd1Q9CQX5 mt-Ti-201ENSMUST00000082393 69 ntBASIC3.37□□□□□ -1.87
Cldnd1Q9CQX5 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Cldnd1Q9CQX5 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.37□□□□□ -1.87
Cldnd1Q9CQX5 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.37□□□□□ -1.87
Cldnd1Q9CQX5 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
Cldnd1Q9CQX5 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Cldnd1Q9CQX5 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.36□□□□□ -1.87
Cldnd1Q9CQX5 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Cldnd1Q9CQX5 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Cldnd1Q9CQX5 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Cldnd1Q9CQX5 Gm43663-201ENSMUST00000198643 1505 ntBASIC3.36□□□□□ -1.87
Cldnd1Q9CQX5 Gm37006-201ENSMUST00000195253 2674 ntBASIC3.36□□□□□ -1.87
Cldnd1Q9CQX5 Gm11065-201ENSMUST00000111462 228 ntBASIC3.36□□□□□ -1.87
Cldnd1Q9CQX5 Gm15211-201ENSMUST00000118932 528 ntBASIC3.36□□□□□ -1.87
Cldnd1Q9CQX5 Mir1942-201ENSMUST00000157274 63 ntBASIC3.36□□□□□ -1.87
Cldnd1Q9CQX5 Gm27723-201ENSMUST00000157398 63 ntBASIC3.36□□□□□ -1.87
Cldnd1Q9CQX5 Gm25384-201ENSMUST00000157807 105 ntBASIC3.36□□□□□ -1.87
Cldnd1Q9CQX5 Gm22654-201ENSMUST00000157874 105 ntBASIC3.36□□□□□ -1.87
Cldnd1Q9CQX5 Gm24997-201ENSMUST00000157910 105 ntBASIC3.36□□□□□ -1.87
Cldnd1Q9CQX5 Gm16289-201ENSMUST00000162079 183 ntBASIC3.36□□□□□ -1.87
Cldnd1Q9CQX5 Gm24084-201ENSMUST00000175173 137 ntBASIC3.36□□□□□ -1.87
Cldnd1Q9CQX5 Snora15-201ENSMUST00000177461 131 ntBASIC3.36□□□□□ -1.87
Cldnd1Q9CQX5 Gm22308-201ENSMUST00000177609 107 ntBASIC3.36□□□□□ -1.87
Cldnd1Q9CQX5 Gm37162-201ENSMUST00000191708 551 ntBASIC3.36□□□□□ -1.87
Cldnd1Q9CQX5 Mir7661-201ENSMUST00000197023 61 ntBASIC3.36□□□□□ -1.87
Cldnd1Q9CQX5 Gm44473-201ENSMUST00000204039 152 ntBASIC3.36□□□□□ -1.87
Cldnd1Q9CQX5 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC3.36□□□□□ -1.87
Cldnd1Q9CQX5 Gm44960-201ENSMUST00000207403 141 ntBASIC3.36□□□□□ -1.87
Cldnd1Q9CQX5 AC165157.3-201ENSMUST00000220815 103 ntBASIC3.36□□□□□ -1.87
Cldnd1Q9CQX5 AC162934.1-201ENSMUST00000222880 309 ntBASIC3.36□□□□□ -1.87
Cldnd1Q9CQX5 Gm10088-201ENSMUST00000074116 423 ntBASIC3.36□□□□□ -1.87
Cldnd1Q9CQX5 Gm23517-201ENSMUST00000082830 192 ntBASIC3.36□□□□□ -1.87
Cldnd1Q9CQX5 Gm22997-201ENSMUST00000082845 107 ntBASIC3.36□□□□□ -1.87
Cldnd1Q9CQX5 Gm26497-201ENSMUST00000083146 107 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms