Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Mir223-201ENSMUST00000102112 110 ntBASIC1.45□□□□□ -2.18
Lsm1Q8VC85 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Lsm1Q8VC85 Gm23950-201ENSMUST00000104026 129 ntBASIC1.45□□□□□ -2.18
Lsm1Q8VC85 Gm13432-201ENSMUST00000118861 241 ntBASIC1.45□□□□□ -2.18
Lsm1Q8VC85 Gm14785-201ENSMUST00000120185 539 ntBASIC1.45□□□□□ -2.18
Lsm1Q8VC85 Gm14428-201ENSMUST00000120408 822 ntBASIC1.45□□□□□ -2.18
Lsm1Q8VC85 Gm2768-201ENSMUST00000121062 250 ntBASIC1.45□□□□□ -2.18
Lsm1Q8VC85 Gm14530-201ENSMUST00000122391 333 ntBASIC1.45□□□□□ -2.18
Lsm1Q8VC85 Mir1942-201ENSMUST00000157274 63 ntBASIC1.45□□□□□ -2.18
Lsm1Q8VC85 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.45□□□□□ -2.18
Lsm1Q8VC85 Gm25454-201ENSMUST00000157947 315 ntBASIC1.45□□□□□ -2.18
Lsm1Q8VC85 Gm25012-201ENSMUST00000158396 164 ntBASIC1.45□□□□□ -2.18
Lsm1Q8VC85 Gm24573-201ENSMUST00000175499 112 ntBASIC1.45□□□□□ -2.18
Lsm1Q8VC85 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Lsm1Q8VC85 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Lsm1Q8VC85 Olfr1285-201ENSMUST00000208523 903 ntBASIC1.45□□□□□ -2.18
Lsm1Q8VC85 Gm45654-201ENSMUST00000210980 123 ntBASIC1.45□□□□□ -2.18
Lsm1Q8VC85 Gm46103-201ENSMUST00000217614 341 ntBASIC1.45□□□□□ -2.18
Lsm1Q8VC85 AC123656.2-201ENSMUST00000226726 227 ntBASIC1.45□□□□□ -2.18
Lsm1Q8VC85 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Lsm1Q8VC85 Gm23517-201ENSMUST00000082830 192 ntBASIC1.45□□□□□ -2.18
Lsm1Q8VC85 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Lsm1Q8VC85 Gm24677-201ENSMUST00000158755 150 ntBASIC1.44□□□□□ -2.18
Lsm1Q8VC85 Gm25836-201ENSMUST00000158918 123 ntBASIC1.44□□□□□ -2.18
Lsm1Q8VC85 Gm42960-201ENSMUST00000202160 241 ntBASIC1.44□□□□□ -2.18
Lsm1Q8VC85 Gm44962-201ENSMUST00000206460 279 ntBASIC1.44□□□□□ -2.18
Lsm1Q8VC85 Gm44609-201ENSMUST00000207157 460 ntBASIC1.44□□□□□ -2.18
Lsm1Q8VC85 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
Lsm1Q8VC85 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.44□□□□□ -2.18
Lsm1Q8VC85 AC168880.1-201ENSMUST00000225113 707 ntBASIC1.44□□□□□ -2.18
Lsm1Q8VC85 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.44□□□□□ -2.18
Lsm1Q8VC85 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Lsm1Q8VC85 Gm23100-201ENSMUST00000083455 141 ntBASIC1.44□□□□□ -2.18
Lsm1Q8VC85 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Lsm1Q8VC85 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Lsm1Q8VC85 Gm14558-201ENSMUST00000117458 381 ntBASIC1.43□□□□□ -2.18
Lsm1Q8VC85 Gm14943-201ENSMUST00000118056 546 ntBASIC1.43□□□□□ -2.18
Lsm1Q8VC85 Gm12304-201ENSMUST00000120312 385 ntBASIC1.43□□□□□ -2.18
Lsm1Q8VC85 Gm25294-201ENSMUST00000122791 104 ntBASIC1.43□□□□□ -2.18
Lsm1Q8VC85 Gm6956-201ENSMUST00000134724 546 ntBASIC1.43□□□□□ -2.18
Lsm1Q8VC85 Gm23221-201ENSMUST00000158118 93 ntBASIC1.43□□□□□ -2.18
Lsm1Q8VC85 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC1.43□□□□□ -2.18
Lsm1Q8VC85 Gm24754-201ENSMUST00000177997 107 ntBASIC1.43□□□□□ -2.18
Lsm1Q8VC85 Gm25730-201ENSMUST00000178753 165 ntBASIC1.43□□□□□ -2.18
Lsm1Q8VC85 Gm17911-201ENSMUST00000210806 877 ntBASIC1.43□□□□□ -2.18
Lsm1Q8VC85 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC1.43□□□□□ -2.18
Lsm1Q8VC85 AC165106.2-201ENSMUST00000226749 97 ntBASIC1.43□□□□□ -2.18
Lsm1Q8VC85 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.43□□□□□ -2.18
Lsm1Q8VC85 AC122341.1-201ENSMUST00000227291 560 ntBASIC1.43□□□□□ -2.18
Lsm1Q8VC85 Mir320-201ENSMUST00000083594 82 ntBASIC1.43□□□□□ -2.18
Lsm1Q8VC85 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Lsm1Q8VC85 Gm15309-201ENSMUST00000121644 240 ntBASIC1.42□□□□□ -2.18
Lsm1Q8VC85 Gm23983-201ENSMUST00000157142 114 ntBASIC1.42□□□□□ -2.18
Lsm1Q8VC85 Gm24419-201ENSMUST00000157875 332 ntBASIC1.42□□□□□ -2.18
Lsm1Q8VC85 Gm24997-201ENSMUST00000157910 105 ntBASIC1.42□□□□□ -2.18
Lsm1Q8VC85 Gm22963-201ENSMUST00000157960 91 ntBASIC1.42□□□□□ -2.18
Lsm1Q8VC85 Snord116l14-201ENSMUST00000179875 94 ntBASIC1.42□□□□□ -2.18
Lsm1Q8VC85 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC1.42□□□□□ -2.18
Lsm1Q8VC85 Gm44483-201ENSMUST00000197203 97 ntBASIC1.42□□□□□ -2.18
Lsm1Q8VC85 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC1.42□□□□□ -2.18
Lsm1Q8VC85 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC1.42□□□□□ -2.18
Lsm1Q8VC85 Gm45116-201ENSMUST00000207392 275 ntBASIC1.42□□□□□ -2.18
Lsm1Q8VC85 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.42□□□□□ -2.18
Lsm1Q8VC85 Gm46312-201ENSMUST00000220961 420 ntBASIC1.42□□□□□ -2.18
Lsm1Q8VC85 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC1.42□□□□□ -2.18
Lsm1Q8VC85 AC138401.1-201ENSMUST00000221533 116 ntBASIC1.42□□□□□ -2.18
Lsm1Q8VC85 AC154521.1-201ENSMUST00000222635 330 ntBASIC1.42□□□□□ -2.18
Lsm1Q8VC85 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.42□□□□□ -2.18
Lsm1Q8VC85 AC158521.1-201ENSMUST00000225295 660 ntBASIC1.42□□□□□ -2.18
Lsm1Q8VC85 Gm23848-201ENSMUST00000083826 106 ntBASIC1.42□□□□□ -2.18
Lsm1Q8VC85 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
Lsm1Q8VC85 Gm22678-201ENSMUST00000116974 101 ntBASIC1.41□□□□□ -2.18
Lsm1Q8VC85 Gm14835-201ENSMUST00000119039 315 ntBASIC1.41□□□□□ -2.18
Lsm1Q8VC85 Gm6025-201ENSMUST00000121517 201 ntBASIC1.41□□□□□ -2.18
Lsm1Q8VC85 Gm24784-201ENSMUST00000157640 62 ntBASIC1.41□□□□□ -2.18
Lsm1Q8VC85 Gm22316-201ENSMUST00000158012 216 ntBASIC1.41□□□□□ -2.18
Lsm1Q8VC85 Gm22768-201ENSMUST00000158366 153 ntBASIC1.41□□□□□ -2.18
Lsm1Q8VC85 Gm22664-201ENSMUST00000158719 105 ntBASIC1.41□□□□□ -2.18
Lsm1Q8VC85 Gm25457-201ENSMUST00000179509 107 ntBASIC1.41□□□□□ -2.18
Lsm1Q8VC85 Gm27711-201ENSMUST00000183802 118 ntBASIC1.41□□□□□ -2.18
Lsm1Q8VC85 Gm18356-201ENSMUST00000185677 623 ntBASIC1.41□□□□□ -2.18
Lsm1Q8VC85 Gm37102-201ENSMUST00000195740 1105 ntBASIC1.41□□□□□ -2.18
Lsm1Q8VC85 Gm25820-202ENSMUST00000197479 128 ntBASIC1.41□□□□□ -2.18
Lsm1Q8VC85 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.41□□□□□ -2.18
Lsm1Q8VC85 Gm44666-201ENSMUST00000208544 391 ntBASIC1.41□□□□□ -2.18
Lsm1Q8VC85 AC112274.2-201ENSMUST00000218436 170 ntBASIC1.41□□□□□ -2.18
Lsm1Q8VC85 AC154252.1-201ENSMUST00000226041 473 ntBASIC1.41□□□□□ -2.18
Lsm1Q8VC85 Ear14-201ENSMUST00000049559 468 ntBASIC1.41□□□□□ -2.18
Lsm1Q8VC85 Gm22299-201ENSMUST00000082663 136 ntBASIC1.41□□□□□ -2.18
Lsm1Q8VC85 Gm26175-201ENSMUST00000083794 131 ntBASIC1.41□□□□□ -2.18
Lsm1Q8VC85 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC1.41□□□□□ -2.18
Lsm1Q8VC85 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Lsm1Q8VC85 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
Lsm1Q8VC85 Gm23429-201ENSMUST00000122486 149 ntBASIC1.4□□□□□ -2.19
Lsm1Q8VC85 Gm25325-201ENSMUST00000122559 86 ntBASIC1.4□□□□□ -2.19
Lsm1Q8VC85 Gm24895-201ENSMUST00000122742 74 ntBASIC1.4□□□□□ -2.19
Lsm1Q8VC85 Gm22338-201ENSMUST00000157715 129 ntBASIC1.4□□□□□ -2.19
Lsm1Q8VC85 Gm23558-201ENSMUST00000157823 80 ntBASIC1.4□□□□□ -2.19
Lsm1Q8VC85 Gm23196-201ENSMUST00000158806 107 ntBASIC1.4□□□□□ -2.19
Lsm1Q8VC85 Gm17113-201ENSMUST00000170118 171 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms