Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Ushbp1Q8R370 Gm11936-201ENSMUST00000118323 160 ntBASIC3.66□□□□□ -1.82
Ushbp1Q8R370 Gm12793-201ENSMUST00000119268 292 ntBASIC3.66□□□□□ -1.82
Ushbp1Q8R370 Gm24914-201ENSMUST00000157285 313 ntBASIC3.66□□□□□ -1.82
Ushbp1Q8R370 Gm23557-201ENSMUST00000157820 138 ntBASIC3.66□□□□□ -1.82
Ushbp1Q8R370 Gm28282-201ENSMUST00000186072 186 ntBASIC3.66□□□□□ -1.82
Ushbp1Q8R370 Gm20257-202ENSMUST00000188643 130 ntBASIC3.66□□□□□ -1.82
Ushbp1Q8R370 Gm2077-201ENSMUST00000195017 319 ntBASIC3.66□□□□□ -1.82
Ushbp1Q8R370 Gm45403-201ENSMUST00000209453 276 ntBASIC3.66□□□□□ -1.82
Ushbp1Q8R370 Gm8940-201ENSMUST00000212585 219 ntBASIC3.66□□□□□ -1.82
Ushbp1Q8R370 Gm9370-201ENSMUST00000222787 609 ntBASIC3.66□□□□□ -1.82
Ushbp1Q8R370 Gm22247-201ENSMUST00000082476 131 ntBASIC3.66□□□□□ -1.82
Ushbp1Q8R370 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC3.65□□□□□ -1.82
Ushbp1Q8R370 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Ushbp1Q8R370 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Ushbp1Q8R370 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Ushbp1Q8R370 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.65□□□□□ -1.83
Ushbp1Q8R370 Gm23886-201ENSMUST00000122684 313 ntBASIC3.65□□□□□ -1.83
Ushbp1Q8R370 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC3.65□□□□□ -1.83
Ushbp1Q8R370 Gm23956-201ENSMUST00000157211 119 ntBASIC3.65□□□□□ -1.83
Ushbp1Q8R370 Gm22839-201ENSMUST00000158436 304 ntBASIC3.65□□□□□ -1.83
Ushbp1Q8R370 Gm24085-201ENSMUST00000175172 116 ntBASIC3.65□□□□□ -1.83
Ushbp1Q8R370 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.65□□□□□ -1.83
Ushbp1Q8R370 Gm37085-201ENSMUST00000193780 196 ntBASIC3.65□□□□□ -1.83
Ushbp1Q8R370 Gm7871-201ENSMUST00000195346 618 ntBASIC3.65□□□□□ -1.83
Ushbp1Q8R370 Gm25203-202ENSMUST00000200458 216 ntBASIC3.65□□□□□ -1.83
Ushbp1Q8R370 Gm44223-201ENSMUST00000204854 114 ntBASIC3.65□□□□□ -1.83
Ushbp1Q8R370 AC163033.1-201ENSMUST00000218608 157 ntBASIC3.65□□□□□ -1.83
Ushbp1Q8R370 Gm7422-201ENSMUST00000220115 640 ntBASIC3.65□□□□□ -1.83
Ushbp1Q8R370 AC130829.3-201ENSMUST00000222735 154 ntBASIC3.65□□□□□ -1.83
Ushbp1Q8R370 LOC667541-201ENSMUST00000223408 278 ntBASIC3.65□□□□□ -1.83
Ushbp1Q8R370 Gm25203-201ENSMUST00000082842 215 ntBASIC3.65□□□□□ -1.83
Ushbp1Q8R370 Gm23136-201ENSMUST00000083425 99 ntBASIC3.65□□□□□ -1.83
Ushbp1Q8R370 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
Ushbp1Q8R370 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Ushbp1Q8R370 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
Ushbp1Q8R370 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Ushbp1Q8R370 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Ushbp1Q8R370 Gm26423-201ENSMUST00000104277 128 ntBASIC3.64□□□□□ -1.83
Ushbp1Q8R370 Gm14020-201ENSMUST00000118165 662 ntBASIC3.64□□□□□ -1.83
Ushbp1Q8R370 Gm16021-201ENSMUST00000121176 219 ntBASIC3.64□□□□□ -1.83
Ushbp1Q8R370 Gm26100-201ENSMUST00000157245 127 ntBASIC3.64□□□□□ -1.83
Ushbp1Q8R370 Gm24729-201ENSMUST00000158225 137 ntBASIC3.64□□□□□ -1.83
Ushbp1Q8R370 Gm22621-201ENSMUST00000179678 74 ntBASIC3.64□□□□□ -1.83
Ushbp1Q8R370 Gm28002-201ENSMUST00000184832 100 ntBASIC3.64□□□□□ -1.83
Ushbp1Q8R370 Gm28534-201ENSMUST00000187744 676 ntBASIC3.64□□□□□ -1.83
Ushbp1Q8R370 Gm29665-201ENSMUST00000191457 528 ntBASIC3.64□□□□□ -1.83
Ushbp1Q8R370 Gm44519-201ENSMUST00000206486 122 ntBASIC3.64□□□□□ -1.83
Ushbp1Q8R370 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC3.64□□□□□ -1.83
Ushbp1Q8R370 AC154576.2-202ENSMUST00000223916 688 ntBASIC3.64□□□□□ -1.83
Ushbp1Q8R370 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.64□□□□□ -1.83
Ushbp1Q8R370 CT010454.1-201ENSMUST00000225975 265 ntBASIC3.64□□□□□ -1.83
Ushbp1Q8R370 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.64□□□□□ -1.83
Ushbp1Q8R370 Snora23-201ENSMUST00000082517 184 ntBASIC3.64□□□□□ -1.83
Ushbp1Q8R370 Snora70-201ENSMUST00000083047 137 ntBASIC3.64□□□□□ -1.83
Ushbp1Q8R370 AF357341-201ENSMUST00000083088 75 ntBASIC3.64□□□□□ -1.83
Ushbp1Q8R370 Mir208a-201ENSMUST00000083498 83 ntBASIC3.64□□□□□ -1.83
Ushbp1Q8R370 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.64□□□□□ -1.83
Ushbp1Q8R370 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC3.63□□□□□ -1.83
Ushbp1Q8R370 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.63□□□□□ -1.83
Ushbp1Q8R370 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.63□□□□□ -1.83
Ushbp1Q8R370 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Ushbp1Q8R370 Gm23183-201ENSMUST00000122595 323 ntBASIC3.63□□□□□ -1.83
Ushbp1Q8R370 Gm14298-201ENSMUST00000139032 237 ntBASIC3.63□□□□□ -1.83
Ushbp1Q8R370 Gm16356-201ENSMUST00000143300 169 ntBASIC3.63□□□□□ -1.83
Ushbp1Q8R370 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC3.63□□□□□ -1.83
Ushbp1Q8R370 Mir3103-201ENSMUST00000175474 67 ntBASIC3.63□□□□□ -1.83
Ushbp1Q8R370 Gm37428-201ENSMUST00000193886 137 ntBASIC3.63□□□□□ -1.83
Ushbp1Q8R370 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.63□□□□□ -1.83
Ushbp1Q8R370 Gm43415-201ENSMUST00000201934 750 ntBASIC3.63□□□□□ -1.83
Ushbp1Q8R370 Gm19177-201ENSMUST00000204520 613 ntBASIC3.63□□□□□ -1.83
Ushbp1Q8R370 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.63□□□□□ -1.83
Ushbp1Q8R370 Gm23055-201ENSMUST00000082805 94 ntBASIC3.63□□□□□ -1.83
Ushbp1Q8R370 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.63□□□□□ -1.83
Ushbp1Q8R370 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Ushbp1Q8R370 Mir701-201ENSMUST00000102208 109 ntBASIC3.62□□□□□ -1.83
Ushbp1Q8R370 Gm13378-201ENSMUST00000117483 336 ntBASIC3.62□□□□□ -1.83
Ushbp1Q8R370 Gm23791-201ENSMUST00000122553 293 ntBASIC3.62□□□□□ -1.83
Ushbp1Q8R370 Gm22328-201ENSMUST00000158074 112 ntBASIC3.62□□□□□ -1.83
Ushbp1Q8R370 Gm25718-201ENSMUST00000158632 118 ntBASIC3.62□□□□□ -1.83
Ushbp1Q8R370 Gm22532-201ENSMUST00000158822 140 ntBASIC3.62□□□□□ -1.83
Ushbp1Q8R370 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.62□□□□□ -1.83
Ushbp1Q8R370 AC129541.1-201ENSMUST00000226940 523 ntBASIC3.62□□□□□ -1.83
Ushbp1Q8R370 Mir137-201ENSMUST00000083635 73 ntBASIC3.62□□□□□ -1.83
Ushbp1Q8R370 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
Ushbp1Q8R370 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
Ushbp1Q8R370 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Ushbp1Q8R370 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Ushbp1Q8R370 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.61□□□□□ -1.83
Ushbp1Q8R370 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Ushbp1Q8R370 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.61□□□□□ -1.83
Ushbp1Q8R370 Gm22114-201ENSMUST00000177756 107 ntBASIC3.61□□□□□ -1.83
Ushbp1Q8R370 Mir6346-201ENSMUST00000183982 81 ntBASIC3.61□□□□□ -1.83
Ushbp1Q8R370 Gm29147-201ENSMUST00000186846 315 ntBASIC3.61□□□□□ -1.83
Ushbp1Q8R370 Gm29227-201ENSMUST00000187139 315 ntBASIC3.61□□□□□ -1.83
Ushbp1Q8R370 Gm29034-201ENSMUST00000188099 315 ntBASIC3.61□□□□□ -1.83
Ushbp1Q8R370 Gm28160-201ENSMUST00000191229 315 ntBASIC3.61□□□□□ -1.83
Ushbp1Q8R370 Gm2719-201ENSMUST00000191929 444 ntBASIC3.61□□□□□ -1.83
Ushbp1Q8R370 Gm37129-201ENSMUST00000195791 315 ntBASIC3.61□□□□□ -1.83
Ushbp1Q8R370 Gm43899-201ENSMUST00000203675 246 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 94.8 ms