Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC0.59□□□□□ -2.31
Col6a6Q8C6K9 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC0.59□□□□□ -2.31
Col6a6Q8C6K9 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
Col6a6Q8C6K9 Gm44024-201ENSMUST00000203008 476 ntBASIC0.59□□□□□ -2.31
Col6a6Q8C6K9 Gm45614-201ENSMUST00000209994 721 ntBASIC0.59□□□□□ -2.31
Col6a6Q8C6K9 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC0.59□□□□□ -2.31
Col6a6Q8C6K9 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
Col6a6Q8C6K9 Mir224-201ENSMUST00000083608 82 ntBASIC0.59□□□□□ -2.31
Col6a6Q8C6K9 Gm2003-201ENSMUST00000118537 636 ntBASIC0.59□□□□□ -2.32
Col6a6Q8C6K9 Gm13080-201ENSMUST00000120556 420 ntBASIC0.59□□□□□ -2.32
Col6a6Q8C6K9 Gm22482-201ENSMUST00000122563 359 ntBASIC0.59□□□□□ -2.32
Col6a6Q8C6K9 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC0.59□□□□□ -2.32
Col6a6Q8C6K9 Mir1967-201ENSMUST00000157789 82 ntBASIC0.59□□□□□ -2.32
Col6a6Q8C6K9 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
Col6a6Q8C6K9 Trav12-4-201ENSMUST00000200663 271 ntBASIC0.59□□□□□ -2.32
Col6a6Q8C6K9 Gm43897-201ENSMUST00000204019 309 ntBASIC0.59□□□□□ -2.32
Col6a6Q8C6K9 Gm44989-201ENSMUST00000204749 217 ntBASIC0.59□□□□□ -2.32
Col6a6Q8C6K9 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC0.59□□□□□ -2.32
Col6a6Q8C6K9 Gm25788-201ENSMUST00000082721 131 ntBASIC0.59□□□□□ -2.32
Col6a6Q8C6K9 Gm6587-201ENSMUST00000120219 613 ntBASIC0.58□□□□□ -2.32
Col6a6Q8C6K9 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC0.58□□□□□ -2.32
Col6a6Q8C6K9 Gm22088-201ENSMUST00000158341 117 ntBASIC0.58□□□□□ -2.32
Col6a6Q8C6K9 Gm23704-201ENSMUST00000158844 340 ntBASIC0.58□□□□□ -2.32
Col6a6Q8C6K9 Gm17204-201ENSMUST00000167936 478 ntBASIC0.58□□□□□ -2.32
Col6a6Q8C6K9 Gm43250-201ENSMUST00000196536 273 ntBASIC0.58□□□□□ -2.32
Col6a6Q8C6K9 Gm44857-201ENSMUST00000208331 196 ntBASIC0.58□□□□□ -2.32
Col6a6Q8C6K9 AC158388.1-201ENSMUST00000225441 256 ntBASIC0.58□□□□□ -2.32
Col6a6Q8C6K9 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
Col6a6Q8C6K9 Gm23975-201ENSMUST00000082685 106 ntBASIC0.58□□□□□ -2.32
Col6a6Q8C6K9 Gm25683-201ENSMUST00000083940 131 ntBASIC0.58□□□□□ -2.32
Col6a6Q8C6K9 AC124746.1-201ENSMUST00000227535 1300 ntBASIC0.58□□□□□ -2.32
Col6a6Q8C6K9 AC121844.2-201ENSMUST00000219067 2066 ntBASIC0.58□□□□□ -2.32
Col6a6Q8C6K9 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
Col6a6Q8C6K9 Gm24431-201ENSMUST00000104073 66 ntBASIC0.58□□□□□ -2.32
Col6a6Q8C6K9 Gm22663-201ENSMUST00000158721 102 ntBASIC0.58□□□□□ -2.32
Col6a6Q8C6K9 Gm3027-201ENSMUST00000167579 451 ntBASIC0.58□□□□□ -2.32
Col6a6Q8C6K9 Mir7091-201ENSMUST00000184075 79 ntBASIC0.58□□□□□ -2.32
Col6a6Q8C6K9 Mir6372-201ENSMUST00000185114 109 ntBASIC0.58□□□□□ -2.32
Col6a6Q8C6K9 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
Col6a6Q8C6K9 Gm20058-201ENSMUST00000186939 284 ntBASIC0.58□□□□□ -2.32
Col6a6Q8C6K9 Gm44384-201ENSMUST00000200208 114 ntBASIC0.58□□□□□ -2.32
Col6a6Q8C6K9 AC123803.1-201ENSMUST00000216093 189 ntBASIC0.58□□□□□ -2.32
Col6a6Q8C6K9 AC165106.2-201ENSMUST00000226749 97 ntBASIC0.58□□□□□ -2.32
Col6a6Q8C6K9 Ear14-201ENSMUST00000049559 468 ntBASIC0.58□□□□□ -2.32
Col6a6Q8C6K9 Gm14039-201ENSMUST00000118705 101 ntBASIC0.57□□□□□ -2.32
Col6a6Q8C6K9 Gm24908-201ENSMUST00000157294 127 ntBASIC0.57□□□□□ -2.32
Col6a6Q8C6K9 Gm23181-201ENSMUST00000158685 110 ntBASIC0.57□□□□□ -2.32
Col6a6Q8C6K9 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.57□□□□□ -2.32
Col6a6Q8C6K9 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
Col6a6Q8C6K9 Gm33354-201ENSMUST00000195448 906 ntBASIC0.57□□□□□ -2.32
Col6a6Q8C6K9 Gm43402-201ENSMUST00000197159 159 ntBASIC0.57□□□□□ -2.32
Col6a6Q8C6K9 Gm43228-201ENSMUST00000200735 264 ntBASIC0.57□□□□□ -2.32
Col6a6Q8C6K9 Gm19140-201ENSMUST00000209790 421 ntBASIC0.57□□□□□ -2.32
Col6a6Q8C6K9 Gm7692-201ENSMUST00000213534 409 ntBASIC0.57□□□□□ -2.32
Col6a6Q8C6K9 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC0.57□□□□□ -2.32
Col6a6Q8C6K9 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC0.57□□□□□ -2.32
Col6a6Q8C6K9 AL929285.1-201ENSMUST00000215522 229 ntBASIC0.57□□□□□ -2.32
Col6a6Q8C6K9 AC154252.1-201ENSMUST00000226041 473 ntBASIC0.57□□□□□ -2.32
Col6a6Q8C6K9 CT025525.3-201ENSMUST00000228858 366 ntBASIC0.57□□□□□ -2.32
Col6a6Q8C6K9 Mir125b-2-201ENSMUST00000083538 71 ntBASIC0.57□□□□□ -2.32
Col6a6Q8C6K9 AC122887.2-201ENSMUST00000219465 1603 ntBASIC0.57□□□□□ -2.32
Col6a6Q8C6K9 Gm11857-201ENSMUST00000119817 324 ntBASIC0.57□□□□□ -2.32
Col6a6Q8C6K9 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
Col6a6Q8C6K9 Gm14840-201ENSMUST00000122135 594 ntBASIC0.57□□□□□ -2.32
Col6a6Q8C6K9 n-R5s192-201ENSMUST00000122577 119 ntBASIC0.57□□□□□ -2.32
Col6a6Q8C6K9 Gm16265-201ENSMUST00000134558 108 ntBASIC0.57□□□□□ -2.32
Col6a6Q8C6K9 Gm24476-201ENSMUST00000157437 131 ntBASIC0.57□□□□□ -2.32
Col6a6Q8C6K9 Gm24333-201ENSMUST00000175101 84 ntBASIC0.57□□□□□ -2.32
Col6a6Q8C6K9 Gm21754-201ENSMUST00000177550 479 ntBASIC0.57□□□□□ -2.32
Col6a6Q8C6K9 Gm25936-201ENSMUST00000179952 114 ntBASIC0.57□□□□□ -2.32
Col6a6Q8C6K9 Gm37193-201ENSMUST00000193087 513 ntBASIC0.57□□□□□ -2.32
Col6a6Q8C6K9 Gm7871-201ENSMUST00000195346 618 ntBASIC0.57□□□□□ -2.32
Col6a6Q8C6K9 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC0.57□□□□□ -2.32
Col6a6Q8C6K9 AC125523.1-201ENSMUST00000228018 934 ntBASIC0.57□□□□□ -2.32
Col6a6Q8C6K9 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
Col6a6Q8C6K9 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
Col6a6Q8C6K9 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
Col6a6Q8C6K9 Gm23040-201ENSMUST00000083869 163 ntBASIC0.57□□□□□ -2.32
Col6a6Q8C6K9 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC0.57□□□□□ -2.32
Col6a6Q8C6K9 Gm15088-201ENSMUST00000117973 1508 ntBASIC0.56□□□□□ -2.32
Col6a6Q8C6K9 Gm15098-201ENSMUST00000119036 1508 ntBASIC0.56□□□□□ -2.32
Col6a6Q8C6K9 Gm22779-201ENSMUST00000104085 107 ntBASIC0.56□□□□□ -2.32
Col6a6Q8C6K9 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC0.56□□□□□ -2.32
Col6a6Q8C6K9 Gm12640-201ENSMUST00000120097 310 ntBASIC0.56□□□□□ -2.32
Col6a6Q8C6K9 Gm26256-201ENSMUST00000122499 186 ntBASIC0.56□□□□□ -2.32
Col6a6Q8C6K9 Gm6956-201ENSMUST00000134724 546 ntBASIC0.56□□□□□ -2.32
Col6a6Q8C6K9 Gm22537-201ENSMUST00000158172 199 ntBASIC0.56□□□□□ -2.32
Col6a6Q8C6K9 Gm24768-201ENSMUST00000158512 94 ntBASIC0.56□□□□□ -2.32
Col6a6Q8C6K9 Gm22425-201ENSMUST00000158532 138 ntBASIC0.56□□□□□ -2.32
Col6a6Q8C6K9 Gm25248-201ENSMUST00000175473 98 ntBASIC0.56□□□□□ -2.32
Col6a6Q8C6K9 Gm22252-201ENSMUST00000179316 79 ntBASIC0.56□□□□□ -2.32
Col6a6Q8C6K9 Mir6389-201ENSMUST00000183661 102 ntBASIC0.56□□□□□ -2.32
Col6a6Q8C6K9 Gm27522-201ENSMUST00000183949 230 ntBASIC0.56□□□□□ -2.32
Col6a6Q8C6K9 Gm18775-201ENSMUST00000190763 586 ntBASIC0.56□□□□□ -2.32
Col6a6Q8C6K9 Gm45636-201ENSMUST00000210497 1064 ntBASIC0.56□□□□□ -2.32
Col6a6Q8C6K9 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
Col6a6Q8C6K9 Gm24208-201ENSMUST00000082783 135 ntBASIC0.56□□□□□ -2.32
Col6a6Q8C6K9 Snord118-201ENSMUST00000082965 135 ntBASIC0.56□□□□□ -2.32
Col6a6Q8C6K9 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.56□□□□□ -2.32
Col6a6Q8C6K9 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms