Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Trim47Q8C0E3 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Trim47Q8C0E3 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Trim47Q8C0E3 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.52□□□□□ -1.69
Trim47Q8C0E3 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
Trim47Q8C0E3 Gm3623-201ENSMUST00000173643 2747 ntBASIC4.52□□□□□ -1.69
Trim47Q8C0E3 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm22004-201ENSMUST00000101884 107 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Snord90-201ENSMUST00000104568 111 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm26051-201ENSMUST00000104642 93 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm23492-201ENSMUST00000116837 115 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm22071-201ENSMUST00000116857 83 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Mir1251-201ENSMUST00000175486 84 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm25098-201ENSMUST00000177580 79 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm23356-201ENSMUST00000177610 79 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm24027-201ENSMUST00000177611 79 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm22511-201ENSMUST00000177628 79 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm22630-201ENSMUST00000177781 79 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm23560-201ENSMUST00000177782 79 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm25462-201ENSMUST00000177833 79 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm26059-201ENSMUST00000177865 79 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm22255-201ENSMUST00000177933 79 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm25146-201ENSMUST00000177976 79 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm25523-201ENSMUST00000178044 79 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm24585-201ENSMUST00000178104 79 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm22627-201ENSMUST00000178127 79 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm22912-201ENSMUST00000178242 79 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm24866-201ENSMUST00000178338 79 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm22524-201ENSMUST00000178357 79 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm25710-201ENSMUST00000178367 79 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm23575-201ENSMUST00000178406 79 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm24872-201ENSMUST00000178434 79 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm22449-201ENSMUST00000178924 79 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm24702-201ENSMUST00000178965 79 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm24206-201ENSMUST00000179011 79 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm24528-201ENSMUST00000179164 79 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm22909-201ENSMUST00000179190 79 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm26334-201ENSMUST00000179403 79 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm25463-201ENSMUST00000179405 79 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm25742-201ENSMUST00000179530 79 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm25209-201ENSMUST00000179576 79 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm26392-201ENSMUST00000179661 79 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm25230-201ENSMUST00000179740 79 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm26434-201ENSMUST00000179778 79 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm25741-201ENSMUST00000179825 79 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm24759-201ENSMUST00000179827 79 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm24219-201ENSMUST00000179861 79 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm28755-201ENSMUST00000185773 199 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm28500-201ENSMUST00000190286 151 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm43993-201ENSMUST00000203972 247 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm45116-201ENSMUST00000207392 275 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm39147-201ENSMUST00000211376 465 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm22247-201ENSMUST00000082476 131 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm22251-201ENSMUST00000083216 107 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Mir323-201ENSMUST00000083683 86 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gm23254-201ENSMUST00000097244 79 ntBASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Trim47Q8C0E3 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
Trim47Q8C0E3 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
Trim47Q8C0E3 Gm37868-201ENSMUST00000195578 2735 ntBASIC4.5□□□□□ -1.69
Trim47Q8C0E3 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.5□□□□□ -1.69
Trim47Q8C0E3 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Trim47Q8C0E3 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Trim47Q8C0E3 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Trim47Q8C0E3 Gm26075-201ENSMUST00000104062 121 ntBASIC4.5□□□□□ -1.69
Trim47Q8C0E3 Gm7618-201ENSMUST00000121643 171 ntBASIC4.5□□□□□ -1.69
Trim47Q8C0E3 Gm22983-201ENSMUST00000158308 104 ntBASIC4.5□□□□□ -1.69
Trim47Q8C0E3 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Trim47Q8C0E3 Gm37300-201ENSMUST00000193327 280 ntBASIC4.5□□□□□ -1.69
Trim47Q8C0E3 Gm8274-201ENSMUST00000219820 463 ntBASIC4.5□□□□□ -1.69
Trim47Q8C0E3 Snord21-201ENSMUST00000082519 94 ntBASIC4.5□□□□□ -1.69
Trim47Q8C0E3 Gm23453-201ENSMUST00000083326 106 ntBASIC4.5□□□□□ -1.69
Trim47Q8C0E3 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
Trim47Q8C0E3 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Trim47Q8C0E3 Gm10400-201ENSMUST00000203920 3835 ntBASIC4.49□□□□□ -1.69
Trim47Q8C0E3 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
Trim47Q8C0E3 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.49□□□□□ -1.69
Trim47Q8C0E3 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Trim47Q8C0E3 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Trim47Q8C0E3 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.49□□□□□ -1.69
Trim47Q8C0E3 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Trim47Q8C0E3 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
Trim47Q8C0E3 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
Trim47Q8C0E3 n-R5s150-201ENSMUST00000122705 108 ntBASIC4.49□□□□□ -1.69
Trim47Q8C0E3 Gm11281-201ENSMUST00000141391 576 ntBASIC4.49□□□□□ -1.69
Trim47Q8C0E3 Gm25267-201ENSMUST00000158522 63 ntBASIC4.49□□□□□ -1.69
Trim47Q8C0E3 Gm22665-201ENSMUST00000158720 275 ntBASIC4.49□□□□□ -1.69
Trim47Q8C0E3 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC4.49□□□□□ -1.69
Trim47Q8C0E3 Gm22859-201ENSMUST00000174978 122 ntBASIC4.49□□□□□ -1.69
Trim47Q8C0E3 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.49□□□□□ -1.69
Trim47Q8C0E3 Mir6345-201ENSMUST00000184286 128 ntBASIC4.49□□□□□ -1.69
Trim47Q8C0E3 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC4.49□□□□□ -1.69
Trim47Q8C0E3 Gm28267-201ENSMUST00000191093 265 ntBASIC4.49□□□□□ -1.69
Trim47Q8C0E3 Mir129b-201ENSMUST00000197461 65 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms