Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm26200-201ENSMUST00000180273 79 ntBASIC4.17□□□□□ -1.74
Trim56Q80VI1 Gm17966-201ENSMUST00000193453 594 ntBASIC4.17□□□□□ -1.74
Trim56Q80VI1 Gm18982-201ENSMUST00000198118 529 ntBASIC4.17□□□□□ -1.74
Trim56Q80VI1 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC4.17□□□□□ -1.74
Trim56Q80VI1 Gm40810-201ENSMUST00000219149 253 ntBASIC4.17□□□□□ -1.74
Trim56Q80VI1 Gm26449-201ENSMUST00000082452 104 ntBASIC4.17□□□□□ -1.74
Trim56Q80VI1 Gm24817-201ENSMUST00000093672 105 ntBASIC4.17□□□□□ -1.74
Trim56Q80VI1 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Trim56Q80VI1 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Trim56Q80VI1 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
Trim56Q80VI1 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
Trim56Q80VI1 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Trim56Q80VI1 AC154481.2-201ENSMUST00000222526 3175 ntBASIC4.16□□□□□ -1.74
Trim56Q80VI1 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Trim56Q80VI1 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Trim56Q80VI1 Gm12797-201ENSMUST00000118645 273 ntBASIC4.16□□□□□ -1.74
Trim56Q80VI1 Gm15936-201ENSMUST00000118706 460 ntBASIC4.16□□□□□ -1.74
Trim56Q80VI1 Gm14562-201ENSMUST00000129885 543 ntBASIC4.16□□□□□ -1.74
Trim56Q80VI1 Gm23982-201ENSMUST00000157141 106 ntBASIC4.16□□□□□ -1.74
Trim56Q80VI1 Gm27592-201ENSMUST00000157729 126 ntBASIC4.16□□□□□ -1.74
Trim56Q80VI1 Gm22174-201ENSMUST00000175050 125 ntBASIC4.16□□□□□ -1.74
Trim56Q80VI1 Gm22692-201ENSMUST00000175055 125 ntBASIC4.16□□□□□ -1.74
Trim56Q80VI1 Gm27634-201ENSMUST00000175060 126 ntBASIC4.16□□□□□ -1.74
Trim56Q80VI1 Gm26460-201ENSMUST00000175061 126 ntBASIC4.16□□□□□ -1.74
Trim56Q80VI1 Gm22460-201ENSMUST00000175269 124 ntBASIC4.16□□□□□ -1.74
Trim56Q80VI1 Gm25535-201ENSMUST00000175364 125 ntBASIC4.16□□□□□ -1.74
Trim56Q80VI1 Gm24365-201ENSMUST00000175384 125 ntBASIC4.16□□□□□ -1.74
Trim56Q80VI1 Gm44310-201ENSMUST00000175424 126 ntBASIC4.16□□□□□ -1.74
Trim56Q80VI1 Snord92-201ENSMUST00000175548 85 ntBASIC4.16□□□□□ -1.74
Trim56Q80VI1 Gm22639-201ENSMUST00000175591 125 ntBASIC4.16□□□□□ -1.74
Trim56Q80VI1 Gm24979-201ENSMUST00000178626 126 ntBASIC4.16□□□□□ -1.74
Trim56Q80VI1 Gm27743-201ENSMUST00000185136 126 ntBASIC4.16□□□□□ -1.74
Trim56Q80VI1 Gm28848-201ENSMUST00000189984 168 ntBASIC4.16□□□□□ -1.74
Trim56Q80VI1 Gm43427-201ENSMUST00000198188 331 ntBASIC4.16□□□□□ -1.74
Trim56Q80VI1 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC4.16□□□□□ -1.74
Trim56Q80VI1 Gm45080-201ENSMUST00000206648 283 ntBASIC4.16□□□□□ -1.74
Trim56Q80VI1 Gm44938-201ENSMUST00000208614 427 ntBASIC4.16□□□□□ -1.74
Trim56Q80VI1 Snord35b-201ENSMUST00000082833 87 ntBASIC4.16□□□□□ -1.74
Trim56Q80VI1 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Trim56Q80VI1 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
Trim56Q80VI1 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Trim56Q80VI1 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
Trim56Q80VI1 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Trim56Q80VI1 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC4.15□□□□□ -1.75
Trim56Q80VI1 Gm13992-201ENSMUST00000120558 156 ntBASIC4.15□□□□□ -1.75
Trim56Q80VI1 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC4.15□□□□□ -1.75
Trim56Q80VI1 Mir1942-201ENSMUST00000157274 63 ntBASIC4.15□□□□□ -1.75
Trim56Q80VI1 Gm22337-201ENSMUST00000157721 132 ntBASIC4.15□□□□□ -1.75
Trim56Q80VI1 Gm25977-201ENSMUST00000158697 85 ntBASIC4.15□□□□□ -1.75
Trim56Q80VI1 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Trim56Q80VI1 Mir7658-201ENSMUST00000184043 57 ntBASIC4.15□□□□□ -1.75
Trim56Q80VI1 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC4.15□□□□□ -1.75
Trim56Q80VI1 Gm30341-201ENSMUST00000194363 289 ntBASIC4.15□□□□□ -1.75
Trim56Q80VI1 Mir465d-201ENSMUST00000196314 58 ntBASIC4.15□□□□□ -1.75
Trim56Q80VI1 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC4.15□□□□□ -1.75
Trim56Q80VI1 Mir376a-201ENSMUST00000197584 68 ntBASIC4.15□□□□□ -1.75
Trim56Q80VI1 Gm43814-201ENSMUST00000197851 413 ntBASIC4.15□□□□□ -1.75
Trim56Q80VI1 AC100209.2-201ENSMUST00000224461 451 ntBASIC4.15□□□□□ -1.75
Trim56Q80VI1 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Trim56Q80VI1 Gm23925-201ENSMUST00000082471 132 ntBASIC4.15□□□□□ -1.75
Trim56Q80VI1 Gm24147-201ENSMUST00000082763 144 ntBASIC4.15□□□□□ -1.75
Trim56Q80VI1 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Trim56Q80VI1 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Trim56Q80VI1 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Trim56Q80VI1 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Trim56Q80VI1 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Trim56Q80VI1 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Trim56Q80VI1 Gm43881-201ENSMUST00000203051 2530 ntBASIC4.14□□□□□ -1.75
Trim56Q80VI1 Gm9157-201ENSMUST00000117673 225 ntBASIC4.14□□□□□ -1.75
Trim56Q80VI1 Gm12458-201ENSMUST00000119387 495 ntBASIC4.14□□□□□ -1.75
Trim56Q80VI1 Gm23755-201ENSMUST00000157578 343 ntBASIC4.14□□□□□ -1.75
Trim56Q80VI1 Gm5329-201ENSMUST00000186898 463 ntBASIC4.14□□□□□ -1.75
Trim56Q80VI1 Gm43704-201ENSMUST00000196164 496 ntBASIC4.14□□□□□ -1.75
Trim56Q80VI1 Gm44337-201ENSMUST00000196553 114 ntBASIC4.14□□□□□ -1.75
Trim56Q80VI1 Igkv8-31-201ENSMUST00000200040 372 ntBASIC4.14□□□□□ -1.75
Trim56Q80VI1 AC161254.1-201ENSMUST00000220310 3842 ntBASIC4.14□□□□□ -1.75
Trim56Q80VI1 n-R5s166-201ENSMUST00000082898 121 ntBASIC4.14□□□□□ -1.75
Trim56Q80VI1 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Trim56Q80VI1 AC117226.1-201ENSMUST00000221635 3737 ntBASIC4.14□□□□□ -1.75
Trim56Q80VI1 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
Trim56Q80VI1 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Trim56Q80VI1 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Trim56Q80VI1 Gm37296-201ENSMUST00000192728 2922 ntBASIC4.13□□□□□ -1.75
Trim56Q80VI1 Gm24116-201ENSMUST00000103975 107 ntBASIC4.13□□□□□ -1.75
Trim56Q80VI1 Gm14811-201ENSMUST00000117070 117 ntBASIC4.13□□□□□ -1.75
Trim56Q80VI1 Gm14564-201ENSMUST00000122159 294 ntBASIC4.13□□□□□ -1.75
Trim56Q80VI1 Gm24997-201ENSMUST00000157910 105 ntBASIC4.13□□□□□ -1.75
Trim56Q80VI1 Gm25835-201ENSMUST00000158917 144 ntBASIC4.13□□□□□ -1.75
Trim56Q80VI1 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Trim56Q80VI1 Gm25748-201ENSMUST00000175487 70 ntBASIC4.13□□□□□ -1.75
Trim56Q80VI1 Gm28000-201ENSMUST00000184380 85 ntBASIC4.13□□□□□ -1.75
Trim56Q80VI1 Gm27520-201ENSMUST00000184872 81 ntBASIC4.13□□□□□ -1.75
Trim56Q80VI1 Gm29022-201ENSMUST00000190702 225 ntBASIC4.13□□□□□ -1.75
Trim56Q80VI1 Gm37997-201ENSMUST00000193515 267 ntBASIC4.13□□□□□ -1.75
Trim56Q80VI1 Gm37097-201ENSMUST00000193676 336 ntBASIC4.13□□□□□ -1.75
Trim56Q80VI1 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC4.13□□□□□ -1.75
Trim56Q80VI1 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC4.13□□□□□ -1.75
Trim56Q80VI1 Gm2189-201ENSMUST00000201419 429 ntBASIC4.13□□□□□ -1.75
Trim56Q80VI1 Gm39147-201ENSMUST00000211376 465 ntBASIC4.13□□□□□ -1.75
Trim56Q80VI1 Gm21007-201ENSMUST00000221024 326 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms