Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Snord14c-201ENSMUST00000101927 86 ntBASIC3.3□□□□□ -1.88
Ddx58Q6Q899 Gm12765-201ENSMUST00000117273 615 ntBASIC3.3□□□□□ -1.88
Ddx58Q6Q899 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC3.3□□□□□ -1.88
Ddx58Q6Q899 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Ddx58Q6Q899 Gm23169-201ENSMUST00000157157 112 ntBASIC3.3□□□□□ -1.88
Ddx58Q6Q899 Mir1942-201ENSMUST00000157274 63 ntBASIC3.3□□□□□ -1.88
Ddx58Q6Q899 Gm24997-201ENSMUST00000157910 105 ntBASIC3.3□□□□□ -1.88
Ddx58Q6Q899 Gm27510-201ENSMUST00000158214 64 ntBASIC3.3□□□□□ -1.88
Ddx58Q6Q899 Mir3092-201ENSMUST00000174954 96 ntBASIC3.3□□□□□ -1.88
Ddx58Q6Q899 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC3.3□□□□□ -1.88
Ddx58Q6Q899 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC3.3□□□□□ -1.88
Ddx58Q6Q899 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC3.3□□□□□ -1.88
Ddx58Q6Q899 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC3.3□□□□□ -1.88
Ddx58Q6Q899 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC3.3□□□□□ -1.88
Ddx58Q6Q899 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC3.3□□□□□ -1.88
Ddx58Q6Q899 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC3.3□□□□□ -1.88
Ddx58Q6Q899 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC3.3□□□□□ -1.88
Ddx58Q6Q899 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC3.3□□□□□ -1.88
Ddx58Q6Q899 Gm6060-201ENSMUST00000188671 251 ntBASIC3.3□□□□□ -1.88
Ddx58Q6Q899 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC3.3□□□□□ -1.88
Ddx58Q6Q899 Gm9402-201ENSMUST00000196849 388 ntBASIC3.3□□□□□ -1.88
Ddx58Q6Q899 Gm42739-201ENSMUST00000200687 226 ntBASIC3.3□□□□□ -1.88
Ddx58Q6Q899 Gm43264-201ENSMUST00000202284 325 ntBASIC3.3□□□□□ -1.88
Ddx58Q6Q899 Gm44425-201ENSMUST00000203739 429 ntBASIC3.3□□□□□ -1.88
Ddx58Q6Q899 AC154600.1-201ENSMUST00000226480 714 ntBASIC3.3□□□□□ -1.88
Ddx58Q6Q899 Gm4945-201ENSMUST00000075152 453 ntBASIC3.3□□□□□ -1.88
Ddx58Q6Q899 Gm23096-201ENSMUST00000083447 107 ntBASIC3.3□□□□□ -1.88
Ddx58Q6Q899 Gm37642-201ENSMUST00000193166 1735 ntBASIC3.3□□□□□ -1.88
Ddx58Q6Q899 AC117226.1-201ENSMUST00000221635 3737 ntBASIC3.3□□□□□ -1.88
Ddx58Q6Q899 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Ddx58Q6Q899 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Ddx58Q6Q899 Gm42445-201ENSMUST00000196996 2893 ntBASIC3.3□□□□□ -1.88
Ddx58Q6Q899 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Ddx58Q6Q899 Gm24126-201ENSMUST00000104111 106 ntBASIC3.29□□□□□ -1.88
Ddx58Q6Q899 Gm26256-201ENSMUST00000122499 186 ntBASIC3.29□□□□□ -1.88
Ddx58Q6Q899 Gm24908-201ENSMUST00000157294 127 ntBASIC3.29□□□□□ -1.88
Ddx58Q6Q899 Gm23588-201ENSMUST00000157659 99 ntBASIC3.29□□□□□ -1.88
Ddx58Q6Q899 Snord53-201ENSMUST00000175146 78 ntBASIC3.29□□□□□ -1.88
Ddx58Q6Q899 Gm43723-201ENSMUST00000196886 189 ntBASIC3.29□□□□□ -1.88
Ddx58Q6Q899 Igkv1-108-201ENSMUST00000198926 298 ntBASIC3.29□□□□□ -1.88
Ddx58Q6Q899 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC3.29□□□□□ -1.88
Ddx58Q6Q899 AC117202.2-201ENSMUST00000226491 1101 ntBASIC3.29□□□□□ -1.88
Ddx58Q6Q899 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC3.29□□□□□ -1.88
Ddx58Q6Q899 Gm26327-201ENSMUST00000093724 111 ntBASIC3.29□□□□□ -1.88
Ddx58Q6Q899 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Ddx58Q6Q899 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Ddx58Q6Q899 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Ddx58Q6Q899 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Ddx58Q6Q899 Gm14940-201ENSMUST00000119309 495 ntBASIC3.28□□□□□ -1.88
Ddx58Q6Q899 Gm16232-201ENSMUST00000162856 167 ntBASIC3.28□□□□□ -1.88
Ddx58Q6Q899 Gm26501-201ENSMUST00000178307 107 ntBASIC3.28□□□□□ -1.88
Ddx58Q6Q899 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Ddx58Q6Q899 Gm5224-201ENSMUST00000183060 350 ntBASIC3.28□□□□□ -1.88
Ddx58Q6Q899 Gm18356-201ENSMUST00000185677 623 ntBASIC3.28□□□□□ -1.88
Ddx58Q6Q899 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Ddx58Q6Q899 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC3.28□□□□□ -1.88
Ddx58Q6Q899 CT030182.3-201ENSMUST00000225986 582 ntBASIC3.28□□□□□ -1.88
Ddx58Q6Q899 AC164304.1-201ENSMUST00000226920 272 ntBASIC3.28□□□□□ -1.88
Ddx58Q6Q899 AC135292.1-201ENSMUST00000227665 204 ntBASIC3.28□□□□□ -1.88
Ddx58Q6Q899 Gm22622-201ENSMUST00000082870 129 ntBASIC3.28□□□□□ -1.88
Ddx58Q6Q899 Gm22443-201ENSMUST00000082890 107 ntBASIC3.28□□□□□ -1.88
Ddx58Q6Q899 Gm23247-201ENSMUST00000083373 107 ntBASIC3.28□□□□□ -1.88
Ddx58Q6Q899 Gm25578-201ENSMUST00000083406 104 ntBASIC3.28□□□□□ -1.88
Ddx58Q6Q899 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Ddx58Q6Q899 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.28□□□□□ -1.88
Ddx58Q6Q899 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Ddx58Q6Q899 Gm7164-201ENSMUST00000117503 450 ntBASIC3.27□□□□□ -1.89
Ddx58Q6Q899 Gm16242-201ENSMUST00000117741 334 ntBASIC3.27□□□□□ -1.89
Ddx58Q6Q899 Gm26099-201ENSMUST00000157248 109 ntBASIC3.27□□□□□ -1.89
Ddx58Q6Q899 Gm22080-201ENSMUST00000157591 106 ntBASIC3.27□□□□□ -1.89
Ddx58Q6Q899 Gm7582-201ENSMUST00000160831 603 ntBASIC3.27□□□□□ -1.89
Ddx58Q6Q899 Gm7925-201ENSMUST00000166690 401 ntBASIC3.27□□□□□ -1.89
Ddx58Q6Q899 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC3.27□□□□□ -1.89
Ddx58Q6Q899 Mir7667-201ENSMUST00000183866 63 ntBASIC3.27□□□□□ -1.89
Ddx58Q6Q899 Gm20058-201ENSMUST00000186939 284 ntBASIC3.27□□□□□ -1.89
Ddx58Q6Q899 Gm38050-201ENSMUST00000191904 238 ntBASIC3.27□□□□□ -1.89
Ddx58Q6Q899 Gm37361-201ENSMUST00000194345 132 ntBASIC3.27□□□□□ -1.89
Ddx58Q6Q899 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC3.27□□□□□ -1.89
Ddx58Q6Q899 AC166358.7-201ENSMUST00000221132 108 ntBASIC3.27□□□□□ -1.89
Ddx58Q6Q899 AC125543.5-201ENSMUST00000222799 108 ntBASIC3.27□□□□□ -1.89
Ddx58Q6Q899 CT485612.2-201ENSMUST00000223014 151 ntBASIC3.27□□□□□ -1.89
Ddx58Q6Q899 CT009713.9-201ENSMUST00000223604 389 ntBASIC3.27□□□□□ -1.89
Ddx58Q6Q899 Gm23264-201ENSMUST00000083372 107 ntBASIC3.27□□□□□ -1.89
Ddx58Q6Q899 Gm9218-201ENSMUST00000121068 2694 ntBASIC3.26□□□□□ -1.89
Ddx58Q6Q899 Gm37941-201ENSMUST00000192170 2309 ntBASIC3.26□□□□□ -1.89
Ddx58Q6Q899 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Ddx58Q6Q899 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Ddx58Q6Q899 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.26□□□□□ -1.89
Ddx58Q6Q899 Gm37296-201ENSMUST00000192728 2922 ntBASIC3.26□□□□□ -1.89
Ddx58Q6Q899 Gm42606-201ENSMUST00000114209 239 ntBASIC3.26□□□□□ -1.89
Ddx58Q6Q899 Gm13903-201ENSMUST00000120945 193 ntBASIC3.26□□□□□ -1.89
Ddx58Q6Q899 Gm3027-201ENSMUST00000167579 451 ntBASIC3.26□□□□□ -1.89
Ddx58Q6Q899 Mir6370-201ENSMUST00000183510 120 ntBASIC3.26□□□□□ -1.89
Ddx58Q6Q899 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC3.26□□□□□ -1.89
Ddx58Q6Q899 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC3.26□□□□□ -1.89
Ddx58Q6Q899 Gm26056-201ENSMUST00000083043 104 ntBASIC3.26□□□□□ -1.89
Ddx58Q6Q899 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Ddx58Q6Q899 Gm5596-201ENSMUST00000207988 2421 ntBASIC3.26□□□□□ -1.89
Ddx58Q6Q899 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Ddx58Q6Q899 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms