Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm8242-202ENSMUST00000193056 475 ntBASIC3.86□□□□□ -1.79
Trim28Q62318 Gm19790-201ENSMUST00000214414 251 ntBASIC3.86□□□□□ -1.79
Trim28Q62318 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Trim28Q62318 Gm9818-201ENSMUST00000050900 255 ntBASIC3.86□□□□□ -1.79
Trim28Q62318 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Trim28Q62318 Gm25812-201ENSMUST00000082751 103 ntBASIC3.86□□□□□ -1.79
Trim28Q62318 Gm24410-201ENSMUST00000083433 107 ntBASIC3.86□□□□□ -1.79
Trim28Q62318 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Trim28Q62318 Gm381-201ENSMUST00000117443 2037 ntBASIC3.86□□□□□ -1.79
Trim28Q62318 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Trim28Q62318 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Trim28Q62318 Gm42785-201ENSMUST00000202316 3835 ntBASIC3.86□□□□□ -1.79
Trim28Q62318 Gm8935-202ENSMUST00000105727 1959 ntBASIC3.85□□□□□ -1.79
Trim28Q62318 Mir294-201ENSMUST00000104710 84 ntBASIC3.85□□□□□ -1.79
Trim28Q62318 Gm16032-201ENSMUST00000118534 168 ntBASIC3.85□□□□□ -1.79
Trim28Q62318 Gm15272-201ENSMUST00000120865 233 ntBASIC3.85□□□□□ -1.79
Trim28Q62318 Gm25373-201ENSMUST00000158156 115 ntBASIC3.85□□□□□ -1.79
Trim28Q62318 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC3.85□□□□□ -1.79
Trim28Q62318 Mir3965-201ENSMUST00000175570 69 ntBASIC3.85□□□□□ -1.79
Trim28Q62318 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.85□□□□□ -1.79
Trim28Q62318 Gm37692-201ENSMUST00000192633 232 ntBASIC3.85□□□□□ -1.79
Trim28Q62318 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.85□□□□□ -1.79
Trim28Q62318 Olfr1285-201ENSMUST00000208523 903 ntBASIC3.85□□□□□ -1.79
Trim28Q62318 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.85□□□□□ -1.79
Trim28Q62318 Gm26497-201ENSMUST00000083146 107 ntBASIC3.85□□□□□ -1.79
Trim28Q62318 Gm14910-201ENSMUST00000121037 1805 ntBASIC3.85□□□□□ -1.79
Trim28Q62318 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Trim28Q62318 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Trim28Q62318 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Trim28Q62318 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC3.84□□□□□ -1.79
Trim28Q62318 Gm25466-201ENSMUST00000103995 132 ntBASIC3.84□□□□□ -1.79
Trim28Q62318 Gm13876-201ENSMUST00000118451 261 ntBASIC3.84□□□□□ -1.79
Trim28Q62318 Gm13729-201ENSMUST00000120328 406 ntBASIC3.84□□□□□ -1.79
Trim28Q62318 Gm13967-201ENSMUST00000120404 380 ntBASIC3.84□□□□□ -1.79
Trim28Q62318 Gm12721-201ENSMUST00000120621 268 ntBASIC3.84□□□□□ -1.79
Trim28Q62318 Gm8880-201ENSMUST00000121800 454 ntBASIC3.84□□□□□ -1.79
Trim28Q62318 DQ267100-201ENSMUST00000122600 72 ntBASIC3.84□□□□□ -1.79
Trim28Q62318 Gm13901-201ENSMUST00000137252 468 ntBASIC3.84□□□□□ -1.79
Trim28Q62318 Gm24676-201ENSMUST00000158758 75 ntBASIC3.84□□□□□ -1.79
Trim28Q62318 Gm24019-201ENSMUST00000178620 107 ntBASIC3.84□□□□□ -1.79
Trim28Q62318 Gm26243-201ENSMUST00000179260 107 ntBASIC3.84□□□□□ -1.79
Trim28Q62318 Gm26701-201ENSMUST00000181571 234 ntBASIC3.84□□□□□ -1.79
Trim28Q62318 Gm27700-201ENSMUST00000185003 81 ntBASIC3.84□□□□□ -1.79
Trim28Q62318 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.84□□□□□ -1.79
Trim28Q62318 Gm44859-201ENSMUST00000207831 94 ntBASIC3.84□□□□□ -1.79
Trim28Q62318 Gm5358-201ENSMUST00000212814 353 ntBASIC3.84□□□□□ -1.79
Trim28Q62318 AL627387.1-201ENSMUST00000226063 250 ntBASIC3.84□□□□□ -1.79
Trim28Q62318 Gm23296-201ENSMUST00000082555 107 ntBASIC3.84□□□□□ -1.79
Trim28Q62318 Gm24859-201ENSMUST00000082729 107 ntBASIC3.84□□□□□ -1.79
Trim28Q62318 Gm22704-201ENSMUST00000083027 137 ntBASIC3.84□□□□□ -1.79
Trim28Q62318 Mir21a-201ENSMUST00000083521 92 ntBASIC3.84□□□□□ -1.79
Trim28Q62318 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC3.84□□□□□ -1.79
Trim28Q62318 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Trim28Q62318 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Trim28Q62318 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Trim28Q62318 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Trim28Q62318 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Trim28Q62318 Gm37983-201ENSMUST00000193207 2006 ntBASIC3.83□□□□□ -1.8
Trim28Q62318 Gm36944-201ENSMUST00000192257 2759 ntBASIC3.83□□□□□ -1.8
Trim28Q62318 Gm23422-201ENSMUST00000102000 107 ntBASIC3.83□□□□□ -1.8
Trim28Q62318 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Trim28Q62318 Gm14518-201ENSMUST00000117351 542 ntBASIC3.83□□□□□ -1.8
Trim28Q62318 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC3.83□□□□□ -1.8
Trim28Q62318 Gm23000-201ENSMUST00000157083 139 ntBASIC3.83□□□□□ -1.8
Trim28Q62318 Gm23957-201ENSMUST00000157209 90 ntBASIC3.83□□□□□ -1.8
Trim28Q62318 Gm8580-201ENSMUST00000160295 464 ntBASIC3.83□□□□□ -1.8
Trim28Q62318 Gm25956-201ENSMUST00000175115 217 ntBASIC3.83□□□□□ -1.8
Trim28Q62318 Gm37081-201ENSMUST00000192034 196 ntBASIC3.83□□□□□ -1.8
Trim28Q62318 AC118639.1-201ENSMUST00000227204 338 ntBASIC3.83□□□□□ -1.8
Trim28Q62318 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Trim28Q62318 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Trim28Q62318 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Trim28Q62318 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Trim28Q62318 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
Trim28Q62318 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Trim28Q62318 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Trim28Q62318 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Trim28Q62318 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Trim28Q62318 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Trim28Q62318 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.82□□□□□ -1.8
Trim28Q62318 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.82□□□□□ -1.8
Trim28Q62318 Gm27723-201ENSMUST00000157398 63 ntBASIC3.82□□□□□ -1.8
Trim28Q62318 Gm24958-201ENSMUST00000158009 97 ntBASIC3.82□□□□□ -1.8
Trim28Q62318 Gm25920-201ENSMUST00000158307 99 ntBASIC3.82□□□□□ -1.8
Trim28Q62318 Gm17072-201ENSMUST00000166673 658 ntBASIC3.82□□□□□ -1.8
Trim28Q62318 Gm24167-201ENSMUST00000177733 124 ntBASIC3.82□□□□□ -1.8
Trim28Q62318 Gm24028-201ENSMUST00000178991 124 ntBASIC3.82□□□□□ -1.8
Trim28Q62318 Gm25235-201ENSMUST00000179933 107 ntBASIC3.82□□□□□ -1.8
Trim28Q62318 Gm27470-201ENSMUST00000184070 210 ntBASIC3.82□□□□□ -1.8
Trim28Q62318 Gm29352-201ENSMUST00000188054 544 ntBASIC3.82□□□□□ -1.8
Trim28Q62318 Gm37290-201ENSMUST00000195775 339 ntBASIC3.82□□□□□ -1.8
Trim28Q62318 Gm42623-201ENSMUST00000197225 379 ntBASIC3.82□□□□□ -1.8
Trim28Q62318 Gm32222-201ENSMUST00000203296 298 ntBASIC3.82□□□□□ -1.8
Trim28Q62318 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.82□□□□□ -1.8
Trim28Q62318 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Trim28Q62318 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Trim28Q62318 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC3.81□□□□□ -1.8
Trim28Q62318 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Trim28Q62318 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Trim28Q62318 Gm24605-201ENSMUST00000104772 96 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms