Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Gm45872-201ENSMUST00000209804 1584 ntBASIC0.48□□□□□ -2.33
Ubr3Q5U430 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.48□□□□□ -2.33
Ubr3Q5U430 Gm13359-201ENSMUST00000119000 695 ntBASIC0.48□□□□□ -2.33
Ubr3Q5U430 Gm14411-201ENSMUST00000121798 914 ntBASIC0.48□□□□□ -2.33
Ubr3Q5U430 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC0.48□□□□□ -2.33
Ubr3Q5U430 Gm25838-201ENSMUST00000158920 120 ntBASIC0.48□□□□□ -2.33
Ubr3Q5U430 Gm24020-201ENSMUST00000180156 108 ntBASIC0.48□□□□□ -2.33
Ubr3Q5U430 Gm29740-201ENSMUST00000193182 655 ntBASIC0.48□□□□□ -2.33
Ubr3Q5U430 CT030166.3-201ENSMUST00000223203 193 ntBASIC0.48□□□□□ -2.33
Ubr3Q5U430 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC0.47□□□□□ -2.33
Ubr3Q5U430 Mir3086-201ENSMUST00000175072 87 ntBASIC0.47□□□□□ -2.33
Ubr3Q5U430 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
Ubr3Q5U430 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
Ubr3Q5U430 Gm28408-201ENSMUST00000191557 463 ntBASIC0.47□□□□□ -2.33
Ubr3Q5U430 Gm44482-201ENSMUST00000199232 103 ntBASIC0.47□□□□□ -2.33
Ubr3Q5U430 Gm44828-201ENSMUST00000203745 106 ntBASIC0.47□□□□□ -2.33
Ubr3Q5U430 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC0.47□□□□□ -2.33
Ubr3Q5U430 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC0.46□□□□□ -2.34
Ubr3Q5U430 Gm24333-201ENSMUST00000175101 84 ntBASIC0.46□□□□□ -2.34
Ubr3Q5U430 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC0.46□□□□□ -2.34
Ubr3Q5U430 Gm43142-201ENSMUST00000198670 361 ntBASIC0.46□□□□□ -2.34
Ubr3Q5U430 Gm19441-201ENSMUST00000221545 330 ntBASIC0.46□□□□□ -2.34
Ubr3Q5U430 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
Ubr3Q5U430 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
Ubr3Q5U430 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC0.46□□□□□ -2.34
Ubr3Q5U430 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC0.46□□□□□ -2.34
Ubr3Q5U430 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.46□□□□□ -2.34
Ubr3Q5U430 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC0.46□□□□□ -2.34
Ubr3Q5U430 Gm26101-201ENSMUST00000157246 105 ntBASIC0.46□□□□□ -2.34
Ubr3Q5U430 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
Ubr3Q5U430 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
Ubr3Q5U430 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC0.46□□□□□ -2.34
Ubr3Q5U430 Gm29647-201ENSMUST00000188795 666 ntBASIC0.46□□□□□ -2.34
Ubr3Q5U430 Gm28504-201ENSMUST00000190977 666 ntBASIC0.46□□□□□ -2.34
Ubr3Q5U430 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
Ubr3Q5U430 Gm18268-201ENSMUST00000208445 943 ntBASIC0.46□□□□□ -2.34
Ubr3Q5U430 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.46□□□□□ -2.34
Ubr3Q5U430 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
Ubr3Q5U430 Mir216a-201ENSMUST00000083605 72 ntBASIC0.46□□□□□ -2.34
Ubr3Q5U430 Mir137-201ENSMUST00000083635 73 ntBASIC0.46□□□□□ -2.34
Ubr3Q5U430 Gm13356-201ENSMUST00000121678 335 ntBASIC0.45□□□□□ -2.34
Ubr3Q5U430 Gm44465-201ENSMUST00000199536 114 ntBASIC0.45□□□□□ -2.34
Ubr3Q5U430 Gm43284-201ENSMUST00000200103 253 ntBASIC0.45□□□□□ -2.34
Ubr3Q5U430 Igkv1-136-201ENSMUST00000200635 297 ntBASIC0.45□□□□□ -2.34
Ubr3Q5U430 CT572985.2-201ENSMUST00000220496 211 ntBASIC0.45□□□□□ -2.34
Ubr3Q5U430 Gm22829-201ENSMUST00000083771 106 ntBASIC0.45□□□□□ -2.34
Ubr3Q5U430 Gm14840-201ENSMUST00000122135 594 ntBASIC0.44□□□□□ -2.34
Ubr3Q5U430 Gm20832-201ENSMUST00000189076 665 ntBASIC0.44□□□□□ -2.34
Ubr3Q5U430 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC0.44□□□□□ -2.34
Ubr3Q5U430 Gm36728-201ENSMUST00000195782 665 ntBASIC0.44□□□□□ -2.34
Ubr3Q5U430 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
Ubr3Q5U430 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC0.44□□□□□ -2.34
Ubr3Q5U430 Gm14761-201ENSMUST00000121363 262 ntBASIC0.44□□□□□ -2.34
Ubr3Q5U430 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC0.44□□□□□ -2.34
Ubr3Q5U430 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC0.44□□□□□ -2.34
Ubr3Q5U430 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
Ubr3Q5U430 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC0.44□□□□□ -2.34
Ubr3Q5U430 n-R5s50-201ENSMUST00000083168 111 ntBASIC0.44□□□□□ -2.34
Ubr3Q5U430 Mir125b-2-201ENSMUST00000083538 71 ntBASIC0.44□□□□□ -2.34
Ubr3Q5U430 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC0.43□□□□□ -2.34
Ubr3Q5U430 Gm23531-201ENSMUST00000104567 68 ntBASIC0.43□□□□□ -2.34
Ubr3Q5U430 Gm15126-201ENSMUST00000118631 833 ntBASIC0.43□□□□□ -2.34
Ubr3Q5U430 Gm14360-201ENSMUST00000120670 393 ntBASIC0.43□□□□□ -2.34
Ubr3Q5U430 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC0.43□□□□□ -2.34
Ubr3Q5U430 Gm24086-201ENSMUST00000175171 98 ntBASIC0.43□□□□□ -2.34
Ubr3Q5U430 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC0.43□□□□□ -2.34
Ubr3Q5U430 AC156952.1-201ENSMUST00000220361 793 ntBASIC0.43□□□□□ -2.34
Ubr3Q5U430 CT030194.2-201ENSMUST00000225752 379 ntBASIC0.43□□□□□ -2.34
Ubr3Q5U430 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.43□□□□□ -2.34
Ubr3Q5U430 Gm4732-201ENSMUST00000118778 473 ntBASIC0.42□□□□□ -2.34
Ubr3Q5U430 Mup-ps15-201ENSMUST00000121741 539 ntBASIC0.42□□□□□ -2.34
Ubr3Q5U430 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC0.42□□□□□ -2.34
Ubr3Q5U430 Gm24925-201ENSMUST00000178157 107 ntBASIC0.42□□□□□ -2.34
Ubr3Q5U430 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC0.42□□□□□ -2.34
Ubr3Q5U430 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC0.42□□□□□ -2.34
Ubr3Q5U430 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
Ubr3Q5U430 Gm15088-201ENSMUST00000117973 1508 ntBASIC0.42□□□□□ -2.34
Ubr3Q5U430 Gm15098-201ENSMUST00000119036 1508 ntBASIC0.42□□□□□ -2.34
Ubr3Q5U430 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
Ubr3Q5U430 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
Ubr3Q5U430 Gm12889-201ENSMUST00000118684 241 ntBASIC0.41□□□□□ -2.34
Ubr3Q5U430 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.41□□□□□ -2.34
Ubr3Q5U430 Gm20058-201ENSMUST00000186939 284 ntBASIC0.41□□□□□ -2.34
Ubr3Q5U430 Gm18357-201ENSMUST00000188184 580 ntBASIC0.41□□□□□ -2.34
Ubr3Q5U430 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC0.41□□□□□ -2.34
Ubr3Q5U430 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
Ubr3Q5U430 Gm14731-201ENSMUST00000119216 376 ntBASIC0.41□□□□□ -2.34
Ubr3Q5U430 Gm28688-201ENSMUST00000187301 268 ntBASIC0.41□□□□□ -2.34
Ubr3Q5U430 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
Ubr3Q5U430 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC0.41□□□□□ -2.34
Ubr3Q5U430 AC167140.1-201ENSMUST00000224710 403 ntBASIC0.41□□□□□ -2.34
Ubr3Q5U430 AC133176.1-201ENSMUST00000226668 219 ntBASIC0.41□□□□□ -2.34
Ubr3Q5U430 Gm24747-201ENSMUST00000157835 87 ntBASIC0.4□□□□□ -2.35
Ubr3Q5U430 Gm25718-201ENSMUST00000158632 118 ntBASIC0.4□□□□□ -2.35
Ubr3Q5U430 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC0.4□□□□□ -2.35
Ubr3Q5U430 Gm27977-201ENSMUST00000185159 111 ntBASIC0.4□□□□□ -2.35
Ubr3Q5U430 Gm44607-201ENSMUST00000205611 1090 ntBASIC0.4□□□□□ -2.35
Ubr3Q5U430 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC0.4□□□□□ -2.35
Ubr3Q5U430 n-R5s37-201ENSMUST00000082533 118 ntBASIC0.4□□□□□ -2.35
Ubr3Q5U430 Gm23040-201ENSMUST00000083869 163 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms