Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Gm26396-201ENSMUST00000104093 132 ntBASIC1.31□□□□□ -2.2
Trav2Q5R1I9 Gm15162-201ENSMUST00000119325 283 ntBASIC1.31□□□□□ -2.2
Trav2Q5R1I9 Gm14530-201ENSMUST00000122391 333 ntBASIC1.31□□□□□ -2.2
Trav2Q5R1I9 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
Trav2Q5R1I9 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Trav2Q5R1I9 Gm24713-201ENSMUST00000178850 107 ntBASIC1.31□□□□□ -2.2
Trav2Q5R1I9 Gm25448-201ENSMUST00000180065 107 ntBASIC1.31□□□□□ -2.2
Trav2Q5R1I9 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
Trav2Q5R1I9 Mir6341-201ENSMUST00000183490 121 ntBASIC1.31□□□□□ -2.2
Trav2Q5R1I9 Gm46312-201ENSMUST00000220961 420 ntBASIC1.31□□□□□ -2.2
Trav2Q5R1I9 AC113031.5-201ENSMUST00000227116 606 ntBASIC1.31□□□□□ -2.2
Trav2Q5R1I9 AC160930.1-201ENSMUST00000227194 337 ntBASIC1.31□□□□□ -2.2
Trav2Q5R1I9 Gm26265-201ENSMUST00000083277 135 ntBASIC1.31□□□□□ -2.2
Trav2Q5R1I9 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC1.31□□□□□ -2.2
Trav2Q5R1I9 Gm25888-201ENSMUST00000157778 302 ntBASIC1.3□□□□□ -2.2
Trav2Q5R1I9 Gm6395-201ENSMUST00000167639 691 ntBASIC1.3□□□□□ -2.2
Trav2Q5R1I9 Mir28b-201ENSMUST00000175399 80 ntBASIC1.3□□□□□ -2.2
Trav2Q5R1I9 Gm4076-201ENSMUST00000179230 965 ntBASIC1.3□□□□□ -2.2
Trav2Q5R1I9 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Trav2Q5R1I9 Gm28453-203ENSMUST00000187041 189 ntBASIC1.3□□□□□ -2.2
Trav2Q5R1I9 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.3□□□□□ -2.2
Trav2Q5R1I9 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC1.3□□□□□ -2.2
Trav2Q5R1I9 Gm46103-201ENSMUST00000217614 341 ntBASIC1.3□□□□□ -2.2
Trav2Q5R1I9 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC1.3□□□□□ -2.2
Trav2Q5R1I9 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.3□□□□□ -2.2
Trav2Q5R1I9 AC173482.2-201ENSMUST00000224044 750 ntBASIC1.3□□□□□ -2.2
Trav2Q5R1I9 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.3□□□□□ -2.2
Trav2Q5R1I9 Gm26328-201ENSMUST00000082821 107 ntBASIC1.3□□□□□ -2.2
Trav2Q5R1I9 Gm25794-201ENSMUST00000083286 107 ntBASIC1.3□□□□□ -2.2
Trav2Q5R1I9 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Trav2Q5R1I9 Gm25992-201ENSMUST00000102437 109 ntBASIC1.29□□□□□ -2.2
Trav2Q5R1I9 Gm25377-201ENSMUST00000104334 129 ntBASIC1.29□□□□□ -2.2
Trav2Q5R1I9 Gm14931-201ENSMUST00000111079 253 ntBASIC1.29□□□□□ -2.2
Trav2Q5R1I9 Gm14882-201ENSMUST00000117216 218 ntBASIC1.29□□□□□ -2.2
Trav2Q5R1I9 Gm25730-201ENSMUST00000178753 165 ntBASIC1.29□□□□□ -2.2
Trav2Q5R1I9 Gm27265-201ENSMUST00000183559 77 ntBASIC1.29□□□□□ -2.2
Trav2Q5R1I9 Mir6382-201ENSMUST00000184055 110 ntBASIC1.29□□□□□ -2.2
Trav2Q5R1I9 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC1.29□□□□□ -2.2
Trav2Q5R1I9 Gm43676-201ENSMUST00000197532 540 ntBASIC1.29□□□□□ -2.2
Trav2Q5R1I9 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
Trav2Q5R1I9 AC130829.3-201ENSMUST00000222735 154 ntBASIC1.29□□□□□ -2.2
Trav2Q5R1I9 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.29□□□□□ -2.2
Trav2Q5R1I9 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
Trav2Q5R1I9 Gm25853-201ENSMUST00000082793 132 ntBASIC1.29□□□□□ -2.2
Trav2Q5R1I9 Gm23100-201ENSMUST00000083455 141 ntBASIC1.29□□□□□ -2.2
Trav2Q5R1I9 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Trav2Q5R1I9 Gm26147-201ENSMUST00000104479 114 ntBASIC1.28□□□□□ -2.2
Trav2Q5R1I9 Gm13714-201ENSMUST00000117313 221 ntBASIC1.28□□□□□ -2.2
Trav2Q5R1I9 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC1.28□□□□□ -2.2
Trav2Q5R1I9 Gm5396-201ENSMUST00000121222 532 ntBASIC1.28□□□□□ -2.2
Trav2Q5R1I9 Mir1942-201ENSMUST00000157274 63 ntBASIC1.28□□□□□ -2.2
Trav2Q5R1I9 Gm25454-201ENSMUST00000157947 315 ntBASIC1.28□□□□□ -2.2
Trav2Q5R1I9 Gm22768-201ENSMUST00000158366 153 ntBASIC1.28□□□□□ -2.2
Trav2Q5R1I9 Gm24754-201ENSMUST00000177997 107 ntBASIC1.28□□□□□ -2.2
Trav2Q5R1I9 Gm25020-201ENSMUST00000178071 107 ntBASIC1.28□□□□□ -2.2
Trav2Q5R1I9 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC1.28□□□□□ -2.2
Trav2Q5R1I9 Gm37102-201ENSMUST00000195740 1105 ntBASIC1.28□□□□□ -2.2
Trav2Q5R1I9 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.28□□□□□ -2.2
Trav2Q5R1I9 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.28□□□□□ -2.2
Trav2Q5R1I9 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC1.28□□□□□ -2.2
Trav2Q5R1I9 Gm44128-201ENSMUST00000204909 219 ntBASIC1.28□□□□□ -2.2
Trav2Q5R1I9 Olfr1285-201ENSMUST00000208523 903 ntBASIC1.28□□□□□ -2.2
Trav2Q5R1I9 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC1.28□□□□□ -2.2
Trav2Q5R1I9 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.28□□□□□ -2.2
Trav2Q5R1I9 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC1.28□□□□□ -2.2
Trav2Q5R1I9 AC122341.1-201ENSMUST00000227291 560 ntBASIC1.28□□□□□ -2.2
Trav2Q5R1I9 Gm23517-201ENSMUST00000082830 192 ntBASIC1.28□□□□□ -2.2
Trav2Q5R1I9 Mir19a-201ENSMUST00000083482 82 ntBASIC1.28□□□□□ -2.2
Trav2Q5R1I9 Gm23848-201ENSMUST00000083826 106 ntBASIC1.28□□□□□ -2.2
Trav2Q5R1I9 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
Trav2Q5R1I9 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
Trav2Q5R1I9 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Trav2Q5R1I9 Gm25541-201ENSMUST00000116888 126 ntBASIC1.27□□□□□ -2.21
Trav2Q5R1I9 Gm2003-201ENSMUST00000118537 636 ntBASIC1.27□□□□□ -2.21
Trav2Q5R1I9 Gm14428-201ENSMUST00000120408 822 ntBASIC1.27□□□□□ -2.21
Trav2Q5R1I9 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.27□□□□□ -2.21
Trav2Q5R1I9 Gm26181-201ENSMUST00000157687 106 ntBASIC1.27□□□□□ -2.21
Trav2Q5R1I9 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC1.27□□□□□ -2.21
Trav2Q5R1I9 Gm29603-201ENSMUST00000186792 334 ntBASIC1.27□□□□□ -2.21
Trav2Q5R1I9 Gm18433-201ENSMUST00000192747 197 ntBASIC1.27□□□□□ -2.21
Trav2Q5R1I9 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.27□□□□□ -2.21
Trav2Q5R1I9 Gm44609-201ENSMUST00000207157 460 ntBASIC1.27□□□□□ -2.21
Trav2Q5R1I9 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.27□□□□□ -2.21
Trav2Q5R1I9 AC157017.1-201ENSMUST00000220148 364 ntBASIC1.27□□□□□ -2.21
Trav2Q5R1I9 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.27□□□□□ -2.21
Trav2Q5R1I9 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Trav2Q5R1I9 Gm25636-201ENSMUST00000082666 133 ntBASIC1.27□□□□□ -2.21
Trav2Q5R1I9 Gm26175-201ENSMUST00000083794 131 ntBASIC1.27□□□□□ -2.21
Trav2Q5R1I9 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
Trav2Q5R1I9 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
Trav2Q5R1I9 AC134917.1-201ENSMUST00000220517 1449 ntBASIC1.26□□□□□ -2.21
Trav2Q5R1I9 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Trav2Q5R1I9 Gm22678-201ENSMUST00000116974 101 ntBASIC1.26□□□□□ -2.21
Trav2Q5R1I9 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.26□□□□□ -2.21
Trav2Q5R1I9 Defa-ps13-201ENSMUST00000120695 204 ntBASIC1.26□□□□□ -2.21
Trav2Q5R1I9 Gm14678-201ENSMUST00000121396 482 ntBASIC1.26□□□□□ -2.21
Trav2Q5R1I9 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.26□□□□□ -2.21
Trav2Q5R1I9 Gm25333-201ENSMUST00000158035 246 ntBASIC1.26□□□□□ -2.21
Trav2Q5R1I9 Gm24573-201ENSMUST00000175499 112 ntBASIC1.26□□□□□ -2.21
Trav2Q5R1I9 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 100 ms