Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC1.49□□□□□ -2.17
Trav3-3Q5R1C3 Mir28b-201ENSMUST00000175399 80 ntBASIC1.49□□□□□ -2.17
Trav3-3Q5R1C3 Gm24573-201ENSMUST00000175499 112 ntBASIC1.49□□□□□ -2.17
Trav3-3Q5R1C3 Gm18417-201ENSMUST00000176564 648 ntBASIC1.49□□□□□ -2.17
Trav3-3Q5R1C3 Gm5900-201ENSMUST00000179862 375 ntBASIC1.49□□□□□ -2.17
Trav3-3Q5R1C3 Gm28282-201ENSMUST00000186072 186 ntBASIC1.49□□□□□ -2.17
Trav3-3Q5R1C3 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC1.49□□□□□ -2.17
Trav3-3Q5R1C3 Gm44135-201ENSMUST00000205221 368 ntBASIC1.49□□□□□ -2.17
Trav3-3Q5R1C3 AC147240.1-201ENSMUST00000218767 431 ntBASIC1.49□□□□□ -2.17
Trav3-3Q5R1C3 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC1.49□□□□□ -2.17
Trav3-3Q5R1C3 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.49□□□□□ -2.17
Trav3-3Q5R1C3 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC1.48□□□□□ -2.17
Trav3-3Q5R1C3 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.48□□□□□ -2.17
Trav3-3Q5R1C3 Gm22752-201ENSMUST00000102083 109 ntBASIC1.48□□□□□ -2.17
Trav3-3Q5R1C3 Gm22678-201ENSMUST00000116974 101 ntBASIC1.48□□□□□ -2.17
Trav3-3Q5R1C3 Gm7916-201ENSMUST00000120325 456 ntBASIC1.48□□□□□ -2.17
Trav3-3Q5R1C3 Gm12926-201ENSMUST00000121158 409 ntBASIC1.48□□□□□ -2.17
Trav3-3Q5R1C3 Gm16021-201ENSMUST00000121176 219 ntBASIC1.48□□□□□ -2.17
Trav3-3Q5R1C3 Gm25808-201ENSMUST00000122784 284 ntBASIC1.48□□□□□ -2.17
Trav3-3Q5R1C3 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC1.48□□□□□ -2.17
Trav3-3Q5R1C3 Mir1949-201ENSMUST00000157434 141 ntBASIC1.48□□□□□ -2.17
Trav3-3Q5R1C3 Gm7953-201ENSMUST00000168278 469 ntBASIC1.48□□□□□ -2.17
Trav3-3Q5R1C3 Gm24816-201ENSMUST00000175311 151 ntBASIC1.48□□□□□ -2.17
Trav3-3Q5R1C3 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.48□□□□□ -2.17
Trav3-3Q5R1C3 Gm21885-201ENSMUST00000178891 327 ntBASIC1.48□□□□□ -2.17
Trav3-3Q5R1C3 Gm26864-201ENSMUST00000181346 156 ntBASIC1.48□□□□□ -2.17
Trav3-3Q5R1C3 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC1.48□□□□□ -2.17
Trav3-3Q5R1C3 Gm6445-201ENSMUST00000189515 1112 ntBASIC1.48□□□□□ -2.17
Trav3-3Q5R1C3 Gm38333-201ENSMUST00000193608 604 ntBASIC1.48□□□□□ -2.17
Trav3-3Q5R1C3 Gm43680-201ENSMUST00000199466 340 ntBASIC1.48□□□□□ -2.17
Trav3-3Q5R1C3 Gm44564-201ENSMUST00000207985 180 ntBASIC1.48□□□□□ -2.17
Trav3-3Q5R1C3 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC1.48□□□□□ -2.17
Trav3-3Q5R1C3 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC1.48□□□□□ -2.17
Trav3-3Q5R1C3 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.48□□□□□ -2.17
Trav3-3Q5R1C3 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Trav3-3Q5R1C3 Gm22062-201ENSMUST00000082563 107 ntBASIC1.48□□□□□ -2.17
Trav3-3Q5R1C3 Gm26126-201ENSMUST00000083188 164 ntBASIC1.48□□□□□ -2.17
Trav3-3Q5R1C3 Gm24098-201ENSMUST00000102075 109 ntBASIC1.47□□□□□ -2.17
Trav3-3Q5R1C3 Gm25381-201ENSMUST00000102078 109 ntBASIC1.47□□□□□ -2.17
Trav3-3Q5R1C3 Mir582-201ENSMUST00000103758 81 ntBASIC1.47□□□□□ -2.17
Trav3-3Q5R1C3 Gm8858-201ENSMUST00000118259 342 ntBASIC1.47□□□□□ -2.17
Trav3-3Q5R1C3 Gm14793-201ENSMUST00000118739 311 ntBASIC1.47□□□□□ -2.17
Trav3-3Q5R1C3 Gm22733-201ENSMUST00000158094 91 ntBASIC1.47□□□□□ -2.17
Trav3-3Q5R1C3 Gm25051-201ENSMUST00000158602 249 ntBASIC1.47□□□□□ -2.17
Trav3-3Q5R1C3 Gm2343-201ENSMUST00000161177 1042 ntBASIC1.47□□□□□ -2.17
Trav3-3Q5R1C3 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC1.47□□□□□ -2.17
Trav3-3Q5R1C3 Gm3111-201ENSMUST00000167426 490 ntBASIC1.47□□□□□ -2.17
Trav3-3Q5R1C3 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC1.47□□□□□ -2.17
Trav3-3Q5R1C3 Gm24388-201ENSMUST00000177872 107 ntBASIC1.47□□□□□ -2.17
Trav3-3Q5R1C3 Mir7k-201ENSMUST00000184115 110 ntBASIC1.47□□□□□ -2.17
Trav3-3Q5R1C3 Mir7016-201ENSMUST00000184308 72 ntBASIC1.47□□□□□ -2.17
Trav3-3Q5R1C3 Gm27544-201ENSMUST00000185069 155 ntBASIC1.47□□□□□ -2.17
Trav3-3Q5R1C3 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC1.47□□□□□ -2.17
Trav3-3Q5R1C3 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC1.47□□□□□ -2.17
Trav3-3Q5R1C3 Gm37778-201ENSMUST00000191732 190 ntBASIC1.47□□□□□ -2.17
Trav3-3Q5R1C3 Gm37709-201ENSMUST00000195074 600 ntBASIC1.47□□□□□ -2.17
Trav3-3Q5R1C3 Ighv12-1-201ENSMUST00000195542 329 ntBASIC1.47□□□□□ -2.17
Trav3-3Q5R1C3 Gm43431-201ENSMUST00000198577 340 ntBASIC1.47□□□□□ -2.17
Trav3-3Q5R1C3 Gm45226-201ENSMUST00000206602 288 ntBASIC1.47□□□□□ -2.17
Trav3-3Q5R1C3 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC1.47□□□□□ -2.17
Trav3-3Q5R1C3 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC1.47□□□□□ -2.17
Trav3-3Q5R1C3 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Trav3-3Q5R1C3 AC158622.1-201ENSMUST00000217107 230 ntBASIC1.47□□□□□ -2.17
Trav3-3Q5R1C3 Gm2628-201ENSMUST00000218019 426 ntBASIC1.47□□□□□ -2.17
Trav3-3Q5R1C3 Gm5374-201ENSMUST00000222868 657 ntBASIC1.47□□□□□ -2.17
Trav3-3Q5R1C3 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.47□□□□□ -2.17
Trav3-3Q5R1C3 Gm22806-201ENSMUST00000082738 136 ntBASIC1.47□□□□□ -2.17
Trav3-3Q5R1C3 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC1.46□□□□□ -2.18
Trav3-3Q5R1C3 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Trav3-3Q5R1C3 Mir873a-201ENSMUST00000104863 77 ntBASIC1.46□□□□□ -2.18
Trav3-3Q5R1C3 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Trav3-3Q5R1C3 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC1.46□□□□□ -2.18
Trav3-3Q5R1C3 Gm24237-201ENSMUST00000157790 132 ntBASIC1.46□□□□□ -2.18
Trav3-3Q5R1C3 Gm24222-201ENSMUST00000158834 93 ntBASIC1.46□□□□□ -2.18
Trav3-3Q5R1C3 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC1.46□□□□□ -2.18
Trav3-3Q5R1C3 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC1.46□□□□□ -2.18
Trav3-3Q5R1C3 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Trav3-3Q5R1C3 Gm25933-201ENSMUST00000178943 108 ntBASIC1.46□□□□□ -2.18
Trav3-3Q5R1C3 Gm23144-201ENSMUST00000180226 107 ntBASIC1.46□□□□□ -2.18
Trav3-3Q5R1C3 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Trav3-3Q5R1C3 Gm43587-201ENSMUST00000199590 204 ntBASIC1.46□□□□□ -2.18
Trav3-3Q5R1C3 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.46□□□□□ -2.18
Trav3-3Q5R1C3 Gm17906-201ENSMUST00000202480 901 ntBASIC1.46□□□□□ -2.18
Trav3-3Q5R1C3 Gm44256-201ENSMUST00000203304 335 ntBASIC1.46□□□□□ -2.18
Trav3-3Q5R1C3 AC158597.1-201ENSMUST00000216234 150 ntBASIC1.46□□□□□ -2.18
Trav3-3Q5R1C3 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.46□□□□□ -2.18
Trav3-3Q5R1C3 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Trav3-3Q5R1C3 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.46□□□□□ -2.18
Trav3-3Q5R1C3 AC116589.7-201ENSMUST00000221061 239 ntBASIC1.46□□□□□ -2.18
Trav3-3Q5R1C3 AC164117.1-201ENSMUST00000221726 239 ntBASIC1.46□□□□□ -2.18
Trav3-3Q5R1C3 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Trav3-3Q5R1C3 Gm26228-201ENSMUST00000082512 107 ntBASIC1.46□□□□□ -2.18
Trav3-3Q5R1C3 Gm25080-201ENSMUST00000082526 107 ntBASIC1.46□□□□□ -2.18
Trav3-3Q5R1C3 Gm25518-201ENSMUST00000083864 107 ntBASIC1.46□□□□□ -2.18
Trav3-3Q5R1C3 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Trav3-3Q5R1C3 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Trav3-3Q5R1C3 Gm23747-201ENSMUST00000104228 131 ntBASIC1.45□□□□□ -2.18
Trav3-3Q5R1C3 Gm23175-201ENSMUST00000104371 132 ntBASIC1.45□□□□□ -2.18
Trav3-3Q5R1C3 Gm24889-201ENSMUST00000104388 132 ntBASIC1.45□□□□□ -2.18
Trav3-3Q5R1C3 Gm23342-201ENSMUST00000158958 115 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms