Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC1.71□□□□□ -2.14
Upf3bQ3ULL6 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.71□□□□□ -2.14
Upf3bQ3ULL6 AC154506.3-201ENSMUST00000225417 213 ntBASIC1.71□□□□□ -2.14
Upf3bQ3ULL6 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Upf3bQ3ULL6 Gm22713-201ENSMUST00000116895 130 ntBASIC1.7□□□□□ -2.14
Upf3bQ3ULL6 Gm13714-201ENSMUST00000117313 221 ntBASIC1.7□□□□□ -2.14
Upf3bQ3ULL6 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.7□□□□□ -2.14
Upf3bQ3ULL6 Gm15309-201ENSMUST00000121644 240 ntBASIC1.7□□□□□ -2.14
Upf3bQ3ULL6 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Upf3bQ3ULL6 Gm22316-201ENSMUST00000158012 216 ntBASIC1.7□□□□□ -2.14
Upf3bQ3ULL6 Gm23068-201ENSMUST00000158239 293 ntBASIC1.7□□□□□ -2.14
Upf3bQ3ULL6 Gm24837-201ENSMUST00000158683 81 ntBASIC1.7□□□□□ -2.14
Upf3bQ3ULL6 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC1.7□□□□□ -2.14
Upf3bQ3ULL6 Gm25994-201ENSMUST00000175392 101 ntBASIC1.7□□□□□ -2.14
Upf3bQ3ULL6 Gm22584-201ENSMUST00000177935 92 ntBASIC1.7□□□□□ -2.14
Upf3bQ3ULL6 Gm21885-201ENSMUST00000178891 327 ntBASIC1.7□□□□□ -2.14
Upf3bQ3ULL6 Mir6351-201ENSMUST00000183826 99 ntBASIC1.7□□□□□ -2.14
Upf3bQ3ULL6 Gm27722-201ENSMUST00000183908 76 ntBASIC1.7□□□□□ -2.14
Upf3bQ3ULL6 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.7□□□□□ -2.14
Upf3bQ3ULL6 Gm18433-201ENSMUST00000192747 197 ntBASIC1.7□□□□□ -2.14
Upf3bQ3ULL6 Gm36984-201ENSMUST00000192770 235 ntBASIC1.7□□□□□ -2.14
Upf3bQ3ULL6 Gm37054-201ENSMUST00000193481 543 ntBASIC1.7□□□□□ -2.14
Upf3bQ3ULL6 Gm43114-201ENSMUST00000198298 343 ntBASIC1.7□□□□□ -2.14
Upf3bQ3ULL6 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC1.7□□□□□ -2.14
Upf3bQ3ULL6 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC1.7□□□□□ -2.14
Upf3bQ3ULL6 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.7□□□□□ -2.14
Upf3bQ3ULL6 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.7□□□□□ -2.14
Upf3bQ3ULL6 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.7□□□□□ -2.14
Upf3bQ3ULL6 Gm26446-201ENSMUST00000082455 103 ntBASIC1.7□□□□□ -2.14
Upf3bQ3ULL6 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Upf3bQ3ULL6 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.7□□□□□ -2.14
Upf3bQ3ULL6 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Upf3bQ3ULL6 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC1.69□□□□□ -2.14
Upf3bQ3ULL6 Gm23206-201ENSMUST00000122720 184 ntBASIC1.69□□□□□ -2.14
Upf3bQ3ULL6 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.69□□□□□ -2.14
Upf3bQ3ULL6 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.69□□□□□ -2.14
Upf3bQ3ULL6 Gm24997-201ENSMUST00000157910 105 ntBASIC1.69□□□□□ -2.14
Upf3bQ3ULL6 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Upf3bQ3ULL6 Gm22290-201ENSMUST00000177655 107 ntBASIC1.69□□□□□ -2.14
Upf3bQ3ULL6 Gm22583-201ENSMUST00000178031 107 ntBASIC1.69□□□□□ -2.14
Upf3bQ3ULL6 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC1.69□□□□□ -2.14
Upf3bQ3ULL6 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
Upf3bQ3ULL6 Gm29657-201ENSMUST00000189807 342 ntBASIC1.69□□□□□ -2.14
Upf3bQ3ULL6 Ighv1-32-201ENSMUST00000195149 351 ntBASIC1.69□□□□□ -2.14
Upf3bQ3ULL6 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC1.69□□□□□ -2.14
Upf3bQ3ULL6 Snord43-201ENSMUST00000199549 108 ntBASIC1.69□□□□□ -2.14
Upf3bQ3ULL6 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Upf3bQ3ULL6 AC112274.2-201ENSMUST00000218436 170 ntBASIC1.69□□□□□ -2.14
Upf3bQ3ULL6 CR974485.1-201ENSMUST00000222408 402 ntBASIC1.69□□□□□ -2.14
Upf3bQ3ULL6 Gm26126-201ENSMUST00000083188 164 ntBASIC1.69□□□□□ -2.14
Upf3bQ3ULL6 Mir151-201ENSMUST00000083678 68 ntBASIC1.69□□□□□ -2.14
Upf3bQ3ULL6 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
Upf3bQ3ULL6 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.68□□□□□ -2.14
Upf3bQ3ULL6 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Upf3bQ3ULL6 Gm12106-201ENSMUST00000116006 1200 ntBASIC1.68□□□□□ -2.14
Upf3bQ3ULL6 Gm14013-201ENSMUST00000119006 270 ntBASIC1.68□□□□□ -2.14
Upf3bQ3ULL6 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC1.68□□□□□ -2.14
Upf3bQ3ULL6 Gm15807-201ENSMUST00000119880 1128 ntBASIC1.68□□□□□ -2.14
Upf3bQ3ULL6 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC1.68□□□□□ -2.14
Upf3bQ3ULL6 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC1.68□□□□□ -2.14
Upf3bQ3ULL6 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC1.68□□□□□ -2.14
Upf3bQ3ULL6 Gm24222-201ENSMUST00000158834 93 ntBASIC1.68□□□□□ -2.14
Upf3bQ3ULL6 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Upf3bQ3ULL6 Gm25451-201ENSMUST00000177832 121 ntBASIC1.68□□□□□ -2.14
Upf3bQ3ULL6 Gm7258-201ENSMUST00000179317 300 ntBASIC1.68□□□□□ -2.14
Upf3bQ3ULL6 Gm27878-201ENSMUST00000184000 106 ntBASIC1.68□□□□□ -2.14
Upf3bQ3ULL6 Gm27248-201ENSMUST00000184004 166 ntBASIC1.68□□□□□ -2.14
Upf3bQ3ULL6 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC1.68□□□□□ -2.14
Upf3bQ3ULL6 Gm37946-201ENSMUST00000192064 347 ntBASIC1.68□□□□□ -2.14
Upf3bQ3ULL6 Igkv4-65-201ENSMUST00000196986 358 ntBASIC1.68□□□□□ -2.14
Upf3bQ3ULL6 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Upf3bQ3ULL6 Gm45232-201ENSMUST00000207811 162 ntBASIC1.68□□□□□ -2.14
Upf3bQ3ULL6 Gm45365-201ENSMUST00000209489 256 ntBASIC1.68□□□□□ -2.14
Upf3bQ3ULL6 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC1.68□□□□□ -2.14
Upf3bQ3ULL6 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.68□□□□□ -2.14
Upf3bQ3ULL6 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Upf3bQ3ULL6 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Upf3bQ3ULL6 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Upf3bQ3ULL6 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
Upf3bQ3ULL6 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Upf3bQ3ULL6 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Upf3bQ3ULL6 Gm23670-201ENSMUST00000157469 119 ntBASIC1.67□□□□□ -2.14
Upf3bQ3ULL6 Gm26271-201ENSMUST00000158349 104 ntBASIC1.67□□□□□ -2.14
Upf3bQ3ULL6 Mir7225-201ENSMUST00000184178 54 ntBASIC1.67□□□□□ -2.14
Upf3bQ3ULL6 Mir7009-201ENSMUST00000184519 64 ntBASIC1.67□□□□□ -2.14
Upf3bQ3ULL6 Mir3569-201ENSMUST00000185080 58 ntBASIC1.67□□□□□ -2.14
Upf3bQ3ULL6 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC1.67□□□□□ -2.14
Upf3bQ3ULL6 Gm21673-201ENSMUST00000186640 436 ntBASIC1.67□□□□□ -2.14
Upf3bQ3ULL6 Gm21135-201ENSMUST00000189023 436 ntBASIC1.67□□□□□ -2.14
Upf3bQ3ULL6 Gm32175-201ENSMUST00000193641 346 ntBASIC1.67□□□□□ -2.14
Upf3bQ3ULL6 Trbv24-201ENSMUST00000194614 347 ntBASIC1.67□□□□□ -2.14
Upf3bQ3ULL6 Gm29848-201ENSMUST00000203107 295 ntBASIC1.67□□□□□ -2.14
Upf3bQ3ULL6 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.67□□□□□ -2.14
Upf3bQ3ULL6 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.67□□□□□ -2.14
Upf3bQ3ULL6 AC162931.1-201ENSMUST00000214184 267 ntBASIC1.67□□□□□ -2.14
Upf3bQ3ULL6 Gm9973-202ENSMUST00000220926 166 ntBASIC1.67□□□□□ -2.14
Upf3bQ3ULL6 Gm46312-201ENSMUST00000220961 420 ntBASIC1.67□□□□□ -2.14
Upf3bQ3ULL6 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.67□□□□□ -2.14
Upf3bQ3ULL6 Gm26328-201ENSMUST00000082821 107 ntBASIC1.67□□□□□ -2.14
Upf3bQ3ULL6 Gm25794-201ENSMUST00000083286 107 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 110.9 ms