Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3□□□□□ -1.93
Col28a1Q2UY11 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3□□□□□ -1.93
Col28a1Q2UY11 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC3□□□□□ -1.93
Col28a1Q2UY11 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Col28a1Q2UY11 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC3□□□□□ -1.93
Col28a1Q2UY11 AC158622.1-201ENSMUST00000217107 230 ntBASIC3□□□□□ -1.93
Col28a1Q2UY11 AC144783.2-201ENSMUST00000219089 195 ntBASIC3□□□□□ -1.93
Col28a1Q2UY11 AC153564.2-201ENSMUST00000219464 273 ntBASIC3□□□□□ -1.93
Col28a1Q2UY11 Gm5175-202ENSMUST00000219699 529 ntBASIC3□□□□□ -1.93
Col28a1Q2UY11 Gm9370-201ENSMUST00000222787 609 ntBASIC3□□□□□ -1.93
Col28a1Q2UY11 AC134254.5-201ENSMUST00000223436 400 ntBASIC3□□□□□ -1.93
Col28a1Q2UY11 AC133598.3-201ENSMUST00000224322 568 ntBASIC3□□□□□ -1.93
Col28a1Q2UY11 AC107757.3-201ENSMUST00000226312 535 ntBASIC3□□□□□ -1.93
Col28a1Q2UY11 Gm43715-201ENSMUST00000196307 2715 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm23836-201ENSMUST00000104434 129 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm14627-201ENSMUST00000118931 567 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm15986-201ENSMUST00000122153 400 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm24596-201ENSMUST00000122504 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm23137-201ENSMUST00000157559 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm24750-201ENSMUST00000157843 104 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm25211-201ENSMUST00000177553 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm24540-201ENSMUST00000177627 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm25256-201ENSMUST00000177746 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm22822-201ENSMUST00000177941 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Rnu6-201ENSMUST00000178023 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm23151-201ENSMUST00000178061 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm23402-201ENSMUST00000178130 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm25245-201ENSMUST00000178139 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm24753-201ENSMUST00000178183 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm25829-201ENSMUST00000178275 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm22092-201ENSMUST00000178290 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm24486-201ENSMUST00000178420 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm23217-201ENSMUST00000178482 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm26245-201ENSMUST00000178491 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm24019-201ENSMUST00000178620 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm23610-201ENSMUST00000178659 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm23092-201ENSMUST00000178688 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm25709-201ENSMUST00000178844 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm25547-201ENSMUST00000178877 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm25312-201ENSMUST00000178972 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm24722-201ENSMUST00000179017 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm22969-201ENSMUST00000179018 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm25101-201ENSMUST00000179057 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm26378-201ENSMUST00000179093 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm24873-201ENSMUST00000179101 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm23934-201ENSMUST00000179111 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm22623-201ENSMUST00000179244 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm26243-201ENSMUST00000179260 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm25737-201ENSMUST00000179274 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm22618-201ENSMUST00000179376 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm24182-201ENSMUST00000179419 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm24242-201ENSMUST00000179440 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm25064-201ENSMUST00000179535 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm26295-201ENSMUST00000179690 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm23712-201ENSMUST00000179713 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm22823-201ENSMUST00000179754 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm22360-201ENSMUST00000179775 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm24978-201ENSMUST00000179782 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm24967-201ENSMUST00000179791 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm25173-201ENSMUST00000179794 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm24870-201ENSMUST00000179897 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm22288-201ENSMUST00000179904 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm22645-201ENSMUST00000180010 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm24565-201ENSMUST00000180099 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm23805-201ENSMUST00000180129 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm23512-201ENSMUST00000180237 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm25327-201ENSMUST00000180263 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm26058-201ENSMUST00000180294 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm22418-201ENSMUST00000180326 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Mir195b-201ENSMUST00000184814 97 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm32175-201ENSMUST00000193641 346 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm43284-201ENSMUST00000200103 253 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm45403-201ENSMUST00000209453 276 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 AC153864.2-201ENSMUST00000220424 292 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm23629-201ENSMUST00000082465 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm23924-201ENSMUST00000082474 108 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm22246-201ENSMUST00000082478 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm22747-201ENSMUST00000082495 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm23296-201ENSMUST00000082555 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm22063-201ENSMUST00000082560 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm26129-201ENSMUST00000082719 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm24859-201ENSMUST00000082729 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm23057-201ENSMUST00000082801 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm26328-201ENSMUST00000082821 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm26331-201ENSMUST00000082824 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm24205-201ENSMUST00000082953 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm25405-201ENSMUST00000082973 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm22628-201ENSMUST00000082988 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm26324-201ENSMUST00000083073 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm26496-201ENSMUST00000083150 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm26127-201ENSMUST00000083193 107 ntBASIC2.99□□□□□ -1.93
Col28a1Q2UY11 Gm24456-201ENSMUST00000083198 107 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms