Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm22310-201ENSMUST00000157509 116 ntBASIC4.16□□□□□ -1.74
Col6a1Q04857 Gm25220-201ENSMUST00000157546 95 ntBASIC4.16□□□□□ -1.74
Col6a1Q04857 Gm20450-201ENSMUST00000173652 147 ntBASIC4.16□□□□□ -1.74
Col6a1Q04857 Gm24799-201ENSMUST00000178431 79 ntBASIC4.16□□□□□ -1.74
Col6a1Q04857 Gm23571-201ENSMUST00000180073 127 ntBASIC4.16□□□□□ -1.74
Col6a1Q04857 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC4.16□□□□□ -1.74
Col6a1Q04857 Gm37417-201ENSMUST00000195257 454 ntBASIC4.16□□□□□ -1.74
Col6a1Q04857 Gm44703-201ENSMUST00000205724 248 ntBASIC4.16□□□□□ -1.74
Col6a1Q04857 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Col6a1Q04857 AC121942.2-201ENSMUST00000223824 600 ntBASIC4.16□□□□□ -1.74
Col6a1Q04857 Gm22294-201ENSMUST00000083308 104 ntBASIC4.16□□□□□ -1.74
Col6a1Q04857 Gm23042-201ENSMUST00000083866 101 ntBASIC4.16□□□□□ -1.74
Col6a1Q04857 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Col6a1Q04857 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Col6a1Q04857 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Col6a1Q04857 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
Col6a1Q04857 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.16□□□□□ -1.74
Col6a1Q04857 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
Col6a1Q04857 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
Col6a1Q04857 Gm37236-201ENSMUST00000193670 3249 ntBASIC4.15□□□□□ -1.74
Col6a1Q04857 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC4.15□□□□□ -1.75
Col6a1Q04857 Gm23256-201ENSMUST00000102235 110 ntBASIC4.15□□□□□ -1.75
Col6a1Q04857 Gm25407-201ENSMUST00000104102 134 ntBASIC4.15□□□□□ -1.75
Col6a1Q04857 Gm23609-201ENSMUST00000104542 127 ntBASIC4.15□□□□□ -1.75
Col6a1Q04857 Gm14894-201ENSMUST00000117170 270 ntBASIC4.15□□□□□ -1.75
Col6a1Q04857 Gm13210-201ENSMUST00000121483 273 ntBASIC4.15□□□□□ -1.75
Col6a1Q04857 Gm15065-201ENSMUST00000121699 273 ntBASIC4.15□□□□□ -1.75
Col6a1Q04857 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC4.15□□□□□ -1.75
Col6a1Q04857 Gm23982-201ENSMUST00000157141 106 ntBASIC4.15□□□□□ -1.75
Col6a1Q04857 Gm26028-201ENSMUST00000158660 294 ntBASIC4.15□□□□□ -1.75
Col6a1Q04857 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC4.15□□□□□ -1.75
Col6a1Q04857 Gm25071-201ENSMUST00000175232 70 ntBASIC4.15□□□□□ -1.75
Col6a1Q04857 Gm22908-201ENSMUST00000177620 110 ntBASIC4.15□□□□□ -1.75
Col6a1Q04857 Gm25615-201ENSMUST00000177836 94 ntBASIC4.15□□□□□ -1.75
Col6a1Q04857 Mir7k-201ENSMUST00000184115 110 ntBASIC4.15□□□□□ -1.75
Col6a1Q04857 Gm29022-201ENSMUST00000190702 225 ntBASIC4.15□□□□□ -1.75
Col6a1Q04857 Gm37449-201ENSMUST00000193016 270 ntBASIC4.15□□□□□ -1.75
Col6a1Q04857 Gm18658-201ENSMUST00000195558 270 ntBASIC4.15□□□□□ -1.75
Col6a1Q04857 Gm45031-201ENSMUST00000206800 288 ntBASIC4.15□□□□□ -1.75
Col6a1Q04857 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC4.15□□□□□ -1.75
Col6a1Q04857 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC4.15□□□□□ -1.75
Col6a1Q04857 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Col6a1Q04857 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Col6a1Q04857 Gm5596-201ENSMUST00000207988 2421 ntBASIC4.15□□□□□ -1.75
Col6a1Q04857 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.15□□□□□ -1.75
Col6a1Q04857 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Col6a1Q04857 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Col6a1Q04857 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Col6a1Q04857 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Col6a1Q04857 Gm14816-201ENSMUST00000117174 294 ntBASIC4.14□□□□□ -1.75
Col6a1Q04857 Gm22026-201ENSMUST00000122735 281 ntBASIC4.14□□□□□ -1.75
Col6a1Q04857 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC4.14□□□□□ -1.75
Col6a1Q04857 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC4.14□□□□□ -1.75
Col6a1Q04857 Gm24720-201ENSMUST00000157518 166 ntBASIC4.14□□□□□ -1.75
Col6a1Q04857 Gm24997-201ENSMUST00000157910 105 ntBASIC4.14□□□□□ -1.75
Col6a1Q04857 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.14□□□□□ -1.75
Col6a1Q04857 Gm22108-201ENSMUST00000177961 106 ntBASIC4.14□□□□□ -1.75
Col6a1Q04857 Gm24798-201ENSMUST00000179334 106 ntBASIC4.14□□□□□ -1.75
Col6a1Q04857 Gm27470-201ENSMUST00000184070 210 ntBASIC4.14□□□□□ -1.75
Col6a1Q04857 Gm29104-201ENSMUST00000186304 222 ntBASIC4.14□□□□□ -1.75
Col6a1Q04857 Gm19620-201ENSMUST00000195972 434 ntBASIC4.14□□□□□ -1.75
Col6a1Q04857 Gm43704-201ENSMUST00000196164 496 ntBASIC4.14□□□□□ -1.75
Col6a1Q04857 Gm43749-201ENSMUST00000199345 352 ntBASIC4.14□□□□□ -1.75
Col6a1Q04857 Gm36189-201ENSMUST00000204113 523 ntBASIC4.14□□□□□ -1.75
Col6a1Q04857 AC160134.1-201ENSMUST00000213450 551 ntBASIC4.14□□□□□ -1.75
Col6a1Q04857 AC159885.1-201ENSMUST00000222221 199 ntBASIC4.14□□□□□ -1.75
Col6a1Q04857 AC147545.1-201ENSMUST00000227528 108 ntBASIC4.14□□□□□ -1.75
Col6a1Q04857 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4.14□□□□□ -1.75
Col6a1Q04857 Gm25896-201ENSMUST00000083713 136 ntBASIC4.14□□□□□ -1.75
Col6a1Q04857 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Col6a1Q04857 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Col6a1Q04857 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Col6a1Q04857 Gm42659-201ENSMUST00000196955 1754 ntBASIC4.14□□□□□ -1.75
Col6a1Q04857 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Col6a1Q04857 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
Col6a1Q04857 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Col6a1Q04857 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Col6a1Q04857 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Col6a1Q04857 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC4.13□□□□□ -1.75
Col6a1Q04857 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Col6a1Q04857 Gm13343-201ENSMUST00000116474 105 ntBASIC4.13□□□□□ -1.75
Col6a1Q04857 Gm12793-201ENSMUST00000119268 292 ntBASIC4.13□□□□□ -1.75
Col6a1Q04857 Gm25599-201ENSMUST00000157816 103 ntBASIC4.13□□□□□ -1.75
Col6a1Q04857 Gm24084-201ENSMUST00000175173 137 ntBASIC4.13□□□□□ -1.75
Col6a1Q04857 Gm26141-201ENSMUST00000175299 126 ntBASIC4.13□□□□□ -1.75
Col6a1Q04857 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC4.13□□□□□ -1.75
Col6a1Q04857 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC4.13□□□□□ -1.75
Col6a1Q04857 n-TSaga9-201ENSMUST00000197675 107 ntBASIC4.13□□□□□ -1.75
Col6a1Q04857 Gm2189-201ENSMUST00000201419 429 ntBASIC4.13□□□□□ -1.75
Col6a1Q04857 Gm43978-201ENSMUST00000203491 451 ntBASIC4.13□□□□□ -1.75
Col6a1Q04857 AC129219.3-201ENSMUST00000223790 196 ntBASIC4.13□□□□□ -1.75
Col6a1Q04857 AC124182.1-201ENSMUST00000227091 321 ntBASIC4.13□□□□□ -1.75
Col6a1Q04857 Gm22806-201ENSMUST00000082738 136 ntBASIC4.13□□□□□ -1.75
Col6a1Q04857 Gm22353-201ENSMUST00000083918 136 ntBASIC4.13□□□□□ -1.75
Col6a1Q04857 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Col6a1Q04857 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Col6a1Q04857 Gm37478-201ENSMUST00000193624 3495 ntBASIC4.13□□□□□ -1.75
Col6a1Q04857 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Col6a1Q04857 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.13□□□□□ -1.75
Col6a1Q04857 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms