Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm25175-201ENSMUST00000178712 79 ntBASIC1.39□□□□□ -2.19
Nkx3-1P97436 Gm38333-201ENSMUST00000193608 604 ntBASIC1.39□□□□□ -2.19
Nkx3-1P97436 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC1.39□□□□□ -2.19
Nkx3-1P97436 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.39□□□□□ -2.19
Nkx3-1P97436 Gm42475-201ENSMUST00000201212 295 ntBASIC1.39□□□□□ -2.19
Nkx3-1P97436 Gm43004-201ENSMUST00000201872 703 ntBASIC1.39□□□□□ -2.19
Nkx3-1P97436 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
Nkx3-1P97436 Gm18703-201ENSMUST00000215318 333 ntBASIC1.39□□□□□ -2.19
Nkx3-1P97436 AC111046.1-201ENSMUST00000217715 412 ntBASIC1.39□□□□□ -2.19
Nkx3-1P97436 AC160031.2-201ENSMUST00000218242 274 ntBASIC1.39□□□□□ -2.19
Nkx3-1P97436 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.39□□□□□ -2.19
Nkx3-1P97436 Gm9318-201ENSMUST00000222444 438 ntBASIC1.39□□□□□ -2.19
Nkx3-1P97436 AC158521.1-201ENSMUST00000225295 660 ntBASIC1.39□□□□□ -2.19
Nkx3-1P97436 AC122341.1-201ENSMUST00000227291 560 ntBASIC1.39□□□□□ -2.19
Nkx3-1P97436 AC102291.2-201ENSMUST00000228083 367 ntBASIC1.39□□□□□ -2.19
Nkx3-1P97436 Olfr197-201ENSMUST00000080031 926 ntBASIC1.39□□□□□ -2.19
Nkx3-1P97436 Gm23454-201ENSMUST00000083332 133 ntBASIC1.39□□□□□ -2.19
Nkx3-1P97436 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Nkx3-1P97436 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC1.38□□□□□ -2.19
Nkx3-1P97436 Gm15497-201ENSMUST00000119137 551 ntBASIC1.38□□□□□ -2.19
Nkx3-1P97436 Gm15807-201ENSMUST00000119880 1128 ntBASIC1.38□□□□□ -2.19
Nkx3-1P97436 Gm26256-201ENSMUST00000122499 186 ntBASIC1.38□□□□□ -2.19
Nkx3-1P97436 Gm23078-201ENSMUST00000157848 148 ntBASIC1.38□□□□□ -2.19
Nkx3-1P97436 Gm2855-201ENSMUST00000166765 456 ntBASIC1.38□□□□□ -2.19
Nkx3-1P97436 Gm20794-201ENSMUST00000177626 628 ntBASIC1.38□□□□□ -2.19
Nkx3-1P97436 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC1.38□□□□□ -2.19
Nkx3-1P97436 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC1.38□□□□□ -2.19
Nkx3-1P97436 Gm25670-201ENSMUST00000178423 107 ntBASIC1.38□□□□□ -2.19
Nkx3-1P97436 Gm26239-201ENSMUST00000178842 107 ntBASIC1.38□□□□□ -2.19
Nkx3-1P97436 Gm25361-201ENSMUST00000179358 76 ntBASIC1.38□□□□□ -2.19
Nkx3-1P97436 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC1.38□□□□□ -2.19
Nkx3-1P97436 Gm22633-201ENSMUST00000179834 107 ntBASIC1.38□□□□□ -2.19
Nkx3-1P97436 Gm24267-201ENSMUST00000179841 107 ntBASIC1.38□□□□□ -2.19
Nkx3-1P97436 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC1.38□□□□□ -2.19
Nkx3-1P97436 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC1.38□□□□□ -2.19
Nkx3-1P97436 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC1.38□□□□□ -2.19
Nkx3-1P97436 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC1.38□□□□□ -2.19
Nkx3-1P97436 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC1.38□□□□□ -2.19
Nkx3-1P97436 Mir7667-201ENSMUST00000183866 63 ntBASIC1.38□□□□□ -2.19
Nkx3-1P97436 Mir7241-201ENSMUST00000184532 64 ntBASIC1.38□□□□□ -2.19
Nkx3-1P97436 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.38□□□□□ -2.19
Nkx3-1P97436 Gm28356-202ENSMUST00000187566 858 ntBASIC1.38□□□□□ -2.19
Nkx3-1P97436 Gm20885-201ENSMUST00000190192 654 ntBASIC1.38□□□□□ -2.19
Nkx3-1P97436 Gm37757-201ENSMUST00000193072 210 ntBASIC1.38□□□□□ -2.19
Nkx3-1P97436 Gm37771-201ENSMUST00000193121 265 ntBASIC1.38□□□□□ -2.19
Nkx3-1P97436 Gm36866-201ENSMUST00000193343 657 ntBASIC1.38□□□□□ -2.19
Nkx3-1P97436 Gm36047-201ENSMUST00000193659 657 ntBASIC1.38□□□□□ -2.19
Nkx3-1P97436 Gm17771-201ENSMUST00000194477 1147 ntBASIC1.38□□□□□ -2.19
Nkx3-1P97436 Gm20857-201ENSMUST00000194766 657 ntBASIC1.38□□□□□ -2.19
Nkx3-1P97436 Gm20858-201ENSMUST00000195459 657 ntBASIC1.38□□□□□ -2.19
Nkx3-1P97436 Gm45590-201ENSMUST00000209715 262 ntBASIC1.38□□□□□ -2.19
Nkx3-1P97436 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Nkx3-1P97436 AC101677.1-201ENSMUST00000218590 158 ntBASIC1.38□□□□□ -2.19
Nkx3-1P97436 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.38□□□□□ -2.19
Nkx3-1P97436 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Nkx3-1P97436 Gm22810-201ENSMUST00000082741 158 ntBASIC1.38□□□□□ -2.19
Nkx3-1P97436 Gm24292-201ENSMUST00000082888 107 ntBASIC1.38□□□□□ -2.19
Nkx3-1P97436 Mir16-2-201ENSMUST00000083672 95 ntBASIC1.38□□□□□ -2.19
Nkx3-1P97436 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Nkx3-1P97436 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Nkx3-1P97436 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
Nkx3-1P97436 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Nkx3-1P97436 Gm13355-201ENSMUST00000117996 317 ntBASIC1.37□□□□□ -2.19
Nkx3-1P97436 Gm14013-201ENSMUST00000119006 270 ntBASIC1.37□□□□□ -2.19
Nkx3-1P97436 AA413626-201ENSMUST00000121125 494 ntBASIC1.37□□□□□ -2.19
Nkx3-1P97436 Gm12096-201ENSMUST00000121149 829 ntBASIC1.37□□□□□ -2.19
Nkx3-1P97436 Gm25294-201ENSMUST00000122791 104 ntBASIC1.37□□□□□ -2.19
Nkx3-1P97436 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC1.37□□□□□ -2.19
Nkx3-1P97436 Gm25961-201ENSMUST00000157174 135 ntBASIC1.37□□□□□ -2.19
Nkx3-1P97436 Gm24997-201ENSMUST00000157910 105 ntBASIC1.37□□□□□ -2.19
Nkx3-1P97436 Gm24222-201ENSMUST00000158834 93 ntBASIC1.37□□□□□ -2.19
Nkx3-1P97436 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC1.37□□□□□ -2.19
Nkx3-1P97436 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Nkx3-1P97436 Gm3111-201ENSMUST00000167426 490 ntBASIC1.37□□□□□ -2.19
Nkx3-1P97436 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Nkx3-1P97436 Gm22290-201ENSMUST00000177655 107 ntBASIC1.37□□□□□ -2.19
Nkx3-1P97436 Gm22583-201ENSMUST00000178031 107 ntBASIC1.37□□□□□ -2.19
Nkx3-1P97436 Gm21744-201ENSMUST00000178403 662 ntBASIC1.37□□□□□ -2.19
Nkx3-1P97436 Gm23145-201ENSMUST00000178912 79 ntBASIC1.37□□□□□ -2.19
Nkx3-1P97436 Gm21171-201ENSMUST00000180048 673 ntBASIC1.37□□□□□ -2.19
Nkx3-1P97436 Gm27326-201ENSMUST00000183504 95 ntBASIC1.37□□□□□ -2.19
Nkx3-1P97436 Gm27248-201ENSMUST00000184004 166 ntBASIC1.37□□□□□ -2.19
Nkx3-1P97436 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC1.37□□□□□ -2.19
Nkx3-1P97436 Gm29413-201ENSMUST00000186019 880 ntBASIC1.37□□□□□ -2.19
Nkx3-1P97436 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Nkx3-1P97436 Gm28700-201ENSMUST00000187614 579 ntBASIC1.37□□□□□ -2.19
Nkx3-1P97436 Gm29639-201ENSMUST00000188375 580 ntBASIC1.37□□□□□ -2.19
Nkx3-1P97436 Gm28843-201ENSMUST00000189198 678 ntBASIC1.37□□□□□ -2.19
Nkx3-1P97436 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
Nkx3-1P97436 Gm29546-201ENSMUST00000191171 678 ntBASIC1.37□□□□□ -2.19
Nkx3-1P97436 Gm32175-201ENSMUST00000193641 346 ntBASIC1.37□□□□□ -2.19
Nkx3-1P97436 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.37□□□□□ -2.19
Nkx3-1P97436 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC1.37□□□□□ -2.19
Nkx3-1P97436 Gm29817-201ENSMUST00000210098 172 ntBASIC1.37□□□□□ -2.19
Nkx3-1P97436 Gm45386-201ENSMUST00000210194 218 ntBASIC1.37□□□□□ -2.19
Nkx3-1P97436 AC122225.1-201ENSMUST00000215641 369 ntBASIC1.37□□□□□ -2.19
Nkx3-1P97436 AC121844.1-201ENSMUST00000218706 137 ntBASIC1.37□□□□□ -2.19
Nkx3-1P97436 AC158803.1-201ENSMUST00000219495 316 ntBASIC1.37□□□□□ -2.19
Nkx3-1P97436 Gm19326-201ENSMUST00000219818 326 ntBASIC1.37□□□□□ -2.19
Nkx3-1P97436 Gm6109-201ENSMUST00000223297 348 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms