Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
Sox3P53784 Gm20885-201ENSMUST00000190192 654 ntBASIC2.11□□□□□ -2.07
Sox3P53784 Gm36866-201ENSMUST00000193343 657 ntBASIC2.11□□□□□ -2.07
Sox3P53784 Gm36047-201ENSMUST00000193659 657 ntBASIC2.11□□□□□ -2.07
Sox3P53784 Gm20857-201ENSMUST00000194766 657 ntBASIC2.11□□□□□ -2.07
Sox3P53784 Ighv1-32-201ENSMUST00000195149 351 ntBASIC2.11□□□□□ -2.07
Sox3P53784 Gm20858-201ENSMUST00000195459 657 ntBASIC2.11□□□□□ -2.07
Sox3P53784 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC2.11□□□□□ -2.07
Sox3P53784 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC2.11□□□□□ -2.07
Sox3P53784 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.11□□□□□ -2.07
Sox3P53784 Gm18774-201ENSMUST00000218269 601 ntBASIC2.11□□□□□ -2.07
Sox3P53784 Gm26228-201ENSMUST00000082512 107 ntBASIC2.11□□□□□ -2.07
Sox3P53784 Gm25080-201ENSMUST00000082526 107 ntBASIC2.11□□□□□ -2.07
Sox3P53784 Gm24045-201ENSMUST00000083113 98 ntBASIC2.11□□□□□ -2.07
Sox3P53784 Gm25518-201ENSMUST00000083864 107 ntBASIC2.11□□□□□ -2.07
Sox3P53784 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Sox3P53784 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Sox3P53784 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.1□□□□□ -2.07
Sox3P53784 Gm25507-201ENSMUST00000116981 144 ntBASIC2.1□□□□□ -2.07
Sox3P53784 Gm14852-201ENSMUST00000120065 647 ntBASIC2.1□□□□□ -2.07
Sox3P53784 Gm7916-201ENSMUST00000120325 456 ntBASIC2.1□□□□□ -2.07
Sox3P53784 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC2.1□□□□□ -2.07
Sox3P53784 Gm2830-201ENSMUST00000140330 385 ntBASIC2.1□□□□□ -2.07
Sox3P53784 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC2.1□□□□□ -2.07
Sox3P53784 Gm24076-201ENSMUST00000158179 94 ntBASIC2.1□□□□□ -2.07
Sox3P53784 Gm22841-201ENSMUST00000158443 62 ntBASIC2.1□□□□□ -2.07
Sox3P53784 Gm22668-201ENSMUST00000158716 260 ntBASIC2.1□□□□□ -2.07
Sox3P53784 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.1□□□□□ -2.07
Sox3P53784 Gm24813-201ENSMUST00000175310 84 ntBASIC2.1□□□□□ -2.07
Sox3P53784 Gm24304-201ENSMUST00000177635 107 ntBASIC2.1□□□□□ -2.07
Sox3P53784 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Sox3P53784 Gm24168-201ENSMUST00000178825 107 ntBASIC2.1□□□□□ -2.07
Sox3P53784 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC2.1□□□□□ -2.07
Sox3P53784 Mir7039-201ENSMUST00000183852 85 ntBASIC2.1□□□□□ -2.07
Sox3P53784 Gm27761-201ENSMUST00000184091 131 ntBASIC2.1□□□□□ -2.07
Sox3P53784 Ighv12-1-201ENSMUST00000195542 329 ntBASIC2.1□□□□□ -2.07
Sox3P53784 Gm43582-201ENSMUST00000196149 343 ntBASIC2.1□□□□□ -2.07
Sox3P53784 Gm43007-201ENSMUST00000197618 291 ntBASIC2.1□□□□□ -2.07
Sox3P53784 Gm43083-201ENSMUST00000199594 476 ntBASIC2.1□□□□□ -2.07
Sox3P53784 Gm44142-201ENSMUST00000203358 311 ntBASIC2.1□□□□□ -2.07
Sox3P53784 AC153529.1-201ENSMUST00000217818 370 ntBASIC2.1□□□□□ -2.07
Sox3P53784 Gm22572-201ENSMUST00000082985 105 ntBASIC2.1□□□□□ -2.07
Sox3P53784 Gm24661-201ENSMUST00000083205 104 ntBASIC2.1□□□□□ -2.07
Sox3P53784 Gm23454-201ENSMUST00000083332 133 ntBASIC2.1□□□□□ -2.07
Sox3P53784 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC2.1□□□□□ -2.07
Sox3P53784 Mir450-2-201ENSMUST00000102444 69 ntBASIC2.09□□□□□ -2.07
Sox3P53784 Gm24582-201ENSMUST00000103967 103 ntBASIC2.09□□□□□ -2.07
Sox3P53784 Gm22779-201ENSMUST00000104085 107 ntBASIC2.09□□□□□ -2.07
Sox3P53784 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Sox3P53784 Gm23109-201ENSMUST00000116867 126 ntBASIC2.09□□□□□ -2.07
Sox3P53784 Gm13331-201ENSMUST00000117500 448 ntBASIC2.09□□□□□ -2.07
Sox3P53784 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC2.09□□□□□ -2.07
Sox3P53784 Trav20-201ENSMUST00000142754 347 ntBASIC2.09□□□□□ -2.07
Sox3P53784 Gm24911-201ENSMUST00000157292 136 ntBASIC2.09□□□□□ -2.07
Sox3P53784 Gm22556-201ENSMUST00000157803 100 ntBASIC2.09□□□□□ -2.07
Sox3P53784 Gm23196-201ENSMUST00000158806 107 ntBASIC2.09□□□□□ -2.07
Sox3P53784 Gm23059-201ENSMUST00000158978 107 ntBASIC2.09□□□□□ -2.07
Sox3P53784 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC2.09□□□□□ -2.07
Sox3P53784 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Sox3P53784 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.09□□□□□ -2.07
Sox3P53784 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.09□□□□□ -2.07
Sox3P53784 Mir6370-201ENSMUST00000183510 120 ntBASIC2.09□□□□□ -2.07
Sox3P53784 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC2.09□□□□□ -2.07
Sox3P53784 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC2.09□□□□□ -2.07
Sox3P53784 Gm44490-201ENSMUST00000198566 127 ntBASIC2.09□□□□□ -2.07
Sox3P53784 Gm43529-201ENSMUST00000199178 412 ntBASIC2.09□□□□□ -2.07
Sox3P53784 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC2.09□□□□□ -2.07
Sox3P53784 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC2.09□□□□□ -2.07
Sox3P53784 AC134334.1-201ENSMUST00000214277 255 ntBASIC2.09□□□□□ -2.07
Sox3P53784 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Sox3P53784 AC159203.2-201ENSMUST00000221326 193 ntBASIC2.09□□□□□ -2.07
Sox3P53784 AC108945.1-201ENSMUST00000226477 94 ntBASIC2.09□□□□□ -2.07
Sox3P53784 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.09□□□□□ -2.07
Sox3P53784 Mir10a-201ENSMUST00000083585 110 ntBASIC2.09□□□□□ -2.07
Sox3P53784 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.08
Sox3P53784 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Sox3P53784 Mir669p-2-201ENSMUST00000103868 87 ntBASIC2.08□□□□□ -2.08
Sox3P53784 Mir669p-1-201ENSMUST00000103884 87 ntBASIC2.08□□□□□ -2.08
Sox3P53784 Gm14823-201ENSMUST00000117698 238 ntBASIC2.08□□□□□ -2.08
Sox3P53784 Gm13876-201ENSMUST00000118451 261 ntBASIC2.08□□□□□ -2.08
Sox3P53784 Gm12006-201ENSMUST00000120786 403 ntBASIC2.08□□□□□ -2.08
Sox3P53784 Gm23752-201ENSMUST00000157584 115 ntBASIC2.08□□□□□ -2.08
Sox3P53784 Gm23586-201ENSMUST00000157657 123 ntBASIC2.08□□□□□ -2.08
Sox3P53784 Gm26186-201ENSMUST00000157689 125 ntBASIC2.08□□□□□ -2.08
Sox3P53784 Gm23043-201ENSMUST00000157890 109 ntBASIC2.08□□□□□ -2.08
Sox3P53784 Gm24901-201ENSMUST00000158125 110 ntBASIC2.08□□□□□ -2.08
Sox3P53784 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC2.08□□□□□ -2.08
Sox3P53784 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC2.08□□□□□ -2.08
Sox3P53784 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC2.08□□□□□ -2.08
Sox3P53784 Gm28151-201ENSMUST00000189404 951 ntBASIC2.08□□□□□ -2.08
Sox3P53784 Gm29657-201ENSMUST00000189807 342 ntBASIC2.08□□□□□ -2.08
Sox3P53784 AL928567.1-201ENSMUST00000197891 138 ntBASIC2.08□□□□□ -2.08
Sox3P53784 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.08□□□□□ -2.08
Sox3P53784 Olfr197-201ENSMUST00000080031 926 ntBASIC2.08□□□□□ -2.08
Sox3P53784 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC2.08□□□□□ -2.08
Sox3P53784 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Sox3P53784 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.08□□□□□ -2.08
Sox3P53784 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Sox3P53784 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.07□□□□□ -2.08
Sox3P53784 Gm24280-201ENSMUST00000104237 134 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms