Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Usp4P35123 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Usp4P35123 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.66□□□□□ -1.82
Usp4P35123 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.66□□□□□ -1.82
Usp4P35123 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Usp4P35123 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Usp4P35123 Gm12782-201ENSMUST00000117519 727 ntBASIC3.66□□□□□ -1.82
Usp4P35123 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC3.66□□□□□ -1.82
Usp4P35123 Gm11704-201ENSMUST00000120031 214 ntBASIC3.66□□□□□ -1.82
Usp4P35123 Gm13581-201ENSMUST00000120675 278 ntBASIC3.66□□□□□ -1.82
Usp4P35123 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC3.66□□□□□ -1.82
Usp4P35123 Gm26186-201ENSMUST00000157689 125 ntBASIC3.66□□□□□ -1.82
Usp4P35123 Gm23865-201ENSMUST00000157723 97 ntBASIC3.66□□□□□ -1.82
Usp4P35123 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC3.66□□□□□ -1.82
Usp4P35123 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.66□□□□□ -1.82
Usp4P35123 Mir376a-201ENSMUST00000197584 68 ntBASIC3.66□□□□□ -1.82
Usp4P35123 Gm44010-201ENSMUST00000204432 331 ntBASIC3.66□□□□□ -1.82
Usp4P35123 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Usp4P35123 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.66□□□□□ -1.82
Usp4P35123 AC123533.1-201ENSMUST00000227782 446 ntBASIC3.66□□□□□ -1.82
Usp4P35123 AF357341-201ENSMUST00000083088 75 ntBASIC3.66□□□□□ -1.82
Usp4P35123 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Usp4P35123 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.66□□□□□ -1.82
Usp4P35123 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Usp4P35123 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Usp4P35123 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Usp4P35123 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.65□□□□□ -1.82
Usp4P35123 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Usp4P35123 Gm13076-201ENSMUST00000118041 204 ntBASIC3.65□□□□□ -1.83
Usp4P35123 Gm14838-201ENSMUST00000118913 248 ntBASIC3.65□□□□□ -1.83
Usp4P35123 Gm14770-201ENSMUST00000122197 312 ntBASIC3.65□□□□□ -1.83
Usp4P35123 Gm26479-201ENSMUST00000122620 106 ntBASIC3.65□□□□□ -1.83
Usp4P35123 Gm22984-201ENSMUST00000122751 122 ntBASIC3.65□□□□□ -1.83
Usp4P35123 Gm23326-201ENSMUST00000157419 105 ntBASIC3.65□□□□□ -1.83
Usp4P35123 Gm22380-201ENSMUST00000157479 95 ntBASIC3.65□□□□□ -1.83
Usp4P35123 Gm25454-201ENSMUST00000157947 315 ntBASIC3.65□□□□□ -1.83
Usp4P35123 Gm20698-201ENSMUST00000175657 233 ntBASIC3.65□□□□□ -1.83
Usp4P35123 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Usp4P35123 Gm37698-201ENSMUST00000192605 463 ntBASIC3.65□□□□□ -1.83
Usp4P35123 Gm38238-201ENSMUST00000194334 346 ntBASIC3.65□□□□□ -1.83
Usp4P35123 Mir3535-201ENSMUST00000197651 147 ntBASIC3.65□□□□□ -1.83
Usp4P35123 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Usp4P35123 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC3.65□□□□□ -1.83
Usp4P35123 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC3.65□□□□□ -1.83
Usp4P35123 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC3.65□□□□□ -1.83
Usp4P35123 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.65□□□□□ -1.83
Usp4P35123 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC3.65□□□□□ -1.83
Usp4P35123 AC154328.1-201ENSMUST00000225875 307 ntBASIC3.65□□□□□ -1.83
Usp4P35123 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.65□□□□□ -1.83
Usp4P35123 Gm9795-201ENSMUST00000062156 693 ntBASIC3.65□□□□□ -1.83
Usp4P35123 Gm26166-201ENSMUST00000083788 107 ntBASIC3.65□□□□□ -1.83
Usp4P35123 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.65□□□□□ -1.83
Usp4P35123 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Usp4P35123 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.64□□□□□ -1.83
Usp4P35123 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Usp4P35123 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Usp4P35123 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.64□□□□□ -1.83
Usp4P35123 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Usp4P35123 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.64□□□□□ -1.83
Usp4P35123 Mir465b-1-201ENSMUST00000103940 79 ntBASIC3.64□□□□□ -1.83
Usp4P35123 Mir465b-2-201ENSMUST00000104662 79 ntBASIC3.64□□□□□ -1.83
Usp4P35123 Gm23841-201ENSMUST00000116951 114 ntBASIC3.64□□□□□ -1.83
Usp4P35123 Gm12902-201ENSMUST00000118389 322 ntBASIC3.64□□□□□ -1.83
Usp4P35123 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.64□□□□□ -1.83
Usp4P35123 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.64□□□□□ -1.83
Usp4P35123 Gm26275-201ENSMUST00000157101 268 ntBASIC3.64□□□□□ -1.83
Usp4P35123 Mir1942-201ENSMUST00000157274 63 ntBASIC3.64□□□□□ -1.83
Usp4P35123 Gm25390-201ENSMUST00000157341 103 ntBASIC3.64□□□□□ -1.83
Usp4P35123 Gm25428-201ENSMUST00000157608 114 ntBASIC3.64□□□□□ -1.83
Usp4P35123 Gm25384-201ENSMUST00000157807 105 ntBASIC3.64□□□□□ -1.83
Usp4P35123 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC3.64□□□□□ -1.83
Usp4P35123 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Usp4P35123 Gm22348-201ENSMUST00000178674 79 ntBASIC3.64□□□□□ -1.83
Usp4P35123 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Usp4P35123 Gm27648-201ENSMUST00000184315 107 ntBASIC3.64□□□□□ -1.83
Usp4P35123 Gm28314-201ENSMUST00000191276 345 ntBASIC3.64□□□□□ -1.83
Usp4P35123 Gm37162-201ENSMUST00000191708 551 ntBASIC3.64□□□□□ -1.83
Usp4P35123 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC3.64□□□□□ -1.83
Usp4P35123 Gm45778-201ENSMUST00000211959 153 ntBASIC3.64□□□□□ -1.83
Usp4P35123 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.64□□□□□ -1.83
Usp4P35123 AC154262.1-201ENSMUST00000225976 286 ntBASIC3.64□□□□□ -1.83
Usp4P35123 Gm26314-201ENSMUST00000083891 107 ntBASIC3.64□□□□□ -1.83
Usp4P35123 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Usp4P35123 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.64□□□□□ -1.83
Usp4P35123 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
Usp4P35123 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.64□□□□□ -1.83
Usp4P35123 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
Usp4P35123 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Usp4P35123 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Usp4P35123 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Usp4P35123 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC3.63□□□□□ -1.83
Usp4P35123 Gm12897-201ENSMUST00000120341 250 ntBASIC3.63□□□□□ -1.83
Usp4P35123 Gm12721-201ENSMUST00000120621 268 ntBASIC3.63□□□□□ -1.83
Usp4P35123 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC3.63□□□□□ -1.83
Usp4P35123 Gm14562-201ENSMUST00000129885 543 ntBASIC3.63□□□□□ -1.83
Usp4P35123 Gm22315-201ENSMUST00000158010 143 ntBASIC3.63□□□□□ -1.83
Usp4P35123 Gm23666-201ENSMUST00000158053 116 ntBASIC3.63□□□□□ -1.83
Usp4P35123 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Usp4P35123 Gm17100-201ENSMUST00000168963 272 ntBASIC3.63□□□□□ -1.83
Usp4P35123 Gm5967-201ENSMUST00000172723 494 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms