Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Gm24759-201ENSMUST00000179827 79 ntBASIC3.96□□□□□ -1.78
Hoxd9P28357 Gm24219-201ENSMUST00000179861 79 ntBASIC3.96□□□□□ -1.78
Hoxd9P28357 Gm28755-201ENSMUST00000185773 199 ntBASIC3.96□□□□□ -1.78
Hoxd9P28357 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.96□□□□□ -1.78
Hoxd9P28357 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC3.96□□□□□ -1.78
Hoxd9P28357 Gm37097-201ENSMUST00000193676 336 ntBASIC3.96□□□□□ -1.78
Hoxd9P28357 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.96□□□□□ -1.78
Hoxd9P28357 CT033781.2-201ENSMUST00000221113 153 ntBASIC3.96□□□□□ -1.78
Hoxd9P28357 AC160756.1-201ENSMUST00000227266 235 ntBASIC3.96□□□□□ -1.78
Hoxd9P28357 Gm23510-201ENSMUST00000083083 163 ntBASIC3.96□□□□□ -1.78
Hoxd9P28357 Gm22251-201ENSMUST00000083216 107 ntBASIC3.96□□□□□ -1.78
Hoxd9P28357 Gm23254-201ENSMUST00000097244 79 ntBASIC3.96□□□□□ -1.78
Hoxd9P28357 Gm43047-201ENSMUST00000200089 3460 ntBASIC3.96□□□□□ -1.78
Hoxd9P28357 Gm9343-201ENSMUST00000209016 2609 ntBASIC3.96□□□□□ -1.78
Hoxd9P28357 Gm45393-201ENSMUST00000211634 2631 ntBASIC3.96□□□□□ -1.78
Hoxd9P28357 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Hoxd9P28357 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC3.96□□□□□ -1.78
Hoxd9P28357 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Hoxd9P28357 AC167360.1-201ENSMUST00000222596 2494 ntBASIC3.96□□□□□ -1.78
Hoxd9P28357 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
Hoxd9P28357 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Hoxd9P28357 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Hoxd9P28357 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Hoxd9P28357 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Hoxd9P28357 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
Hoxd9P28357 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Hoxd9P28357 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
Hoxd9P28357 Gm43327-201ENSMUST00000199285 4055 ntBASIC3.95□□□□□ -1.78
Hoxd9P28357 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Hoxd9P28357 Gm42486-201ENSMUST00000200369 3486 ntBASIC3.95□□□□□ -1.78
Hoxd9P28357 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC3.95□□□□□ -1.78
Hoxd9P28357 Gm22004-201ENSMUST00000101884 107 ntBASIC3.95□□□□□ -1.78
Hoxd9P28357 Gm26019-201ENSMUST00000104407 119 ntBASIC3.95□□□□□ -1.78
Hoxd9P28357 Gm23492-201ENSMUST00000116837 115 ntBASIC3.95□□□□□ -1.78
Hoxd9P28357 Gm25543-201ENSMUST00000122678 312 ntBASIC3.95□□□□□ -1.78
Hoxd9P28357 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC3.95□□□□□ -1.78
Hoxd9P28357 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.95□□□□□ -1.78
Hoxd9P28357 Gm7497-201ENSMUST00000183064 1003 ntBASIC3.95□□□□□ -1.78
Hoxd9P28357 Mir3969-201ENSMUST00000197106 92 ntBASIC3.95□□□□□ -1.78
Hoxd9P28357 Gm19908-201ENSMUST00000204684 391 ntBASIC3.95□□□□□ -1.78
Hoxd9P28357 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC3.95□□□□□ -1.78
Hoxd9P28357 Gm39147-201ENSMUST00000211376 465 ntBASIC3.95□□□□□ -1.78
Hoxd9P28357 Gm43320-201ENSMUST00000196047 2916 ntBASIC3.95□□□□□ -1.78
Hoxd9P28357 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
Hoxd9P28357 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.95□□□□□ -1.78
Hoxd9P28357 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Hoxd9P28357 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Hoxd9P28357 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
Hoxd9P28357 Gm44542-201ENSMUST00000208677 4314 ntBASIC3.94□□□□□ -1.78
Hoxd9P28357 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Hoxd9P28357 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Hoxd9P28357 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Hoxd9P28357 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Hoxd9P28357 Gm26387-201ENSMUST00000104238 132 ntBASIC3.94□□□□□ -1.78
Hoxd9P28357 Snord90-201ENSMUST00000104568 111 ntBASIC3.94□□□□□ -1.78
Hoxd9P28357 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC3.94□□□□□ -1.78
Hoxd9P28357 Gm24898-201ENSMUST00000158133 106 ntBASIC3.94□□□□□ -1.78
Hoxd9P28357 Gm24730-201ENSMUST00000158228 117 ntBASIC3.94□□□□□ -1.78
Hoxd9P28357 Gm22156-201ENSMUST00000158409 141 ntBASIC3.94□□□□□ -1.78
Hoxd9P28357 Mir3620-201ENSMUST00000184710 61 ntBASIC3.94□□□□□ -1.78
Hoxd9P28357 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC3.94□□□□□ -1.78
Hoxd9P28357 Gm45116-201ENSMUST00000207392 275 ntBASIC3.94□□□□□ -1.78
Hoxd9P28357 Gm8274-201ENSMUST00000219820 463 ntBASIC3.94□□□□□ -1.78
Hoxd9P28357 AC160962.3-201ENSMUST00000225914 112 ntBASIC3.94□□□□□ -1.78
Hoxd9P28357 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hoxd9P28357 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hoxd9P28357 Gm22247-201ENSMUST00000082476 131 ntBASIC3.94□□□□□ -1.78
Hoxd9P28357 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Hoxd9P28357 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.94□□□□□ -1.78
Hoxd9P28357 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hoxd9P28357 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hoxd9P28357 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hoxd9P28357 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Hoxd9P28357 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Hoxd9P28357 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Hoxd9P28357 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Hoxd9P28357 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC3.93□□□□□ -1.78
Hoxd9P28357 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
Hoxd9P28357 AC153964.2-201ENSMUST00000217704 2474 ntBASIC3.93□□□□□ -1.78
Hoxd9P28357 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Hoxd9P28357 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Hoxd9P28357 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
Hoxd9P28357 Gm23273-201ENSMUST00000104058 135 ntBASIC3.93□□□□□ -1.78
Hoxd9P28357 Gm26051-201ENSMUST00000104642 93 ntBASIC3.93□□□□□ -1.78
Hoxd9P28357 n-R5s150-201ENSMUST00000122705 108 ntBASIC3.93□□□□□ -1.78
Hoxd9P28357 Gm22314-201ENSMUST00000158007 281 ntBASIC3.93□□□□□ -1.78
Hoxd9P28357 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC3.93□□□□□ -1.78
Hoxd9P28357 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Hoxd9P28357 Mir7682-201ENSMUST00000198467 58 ntBASIC3.93□□□□□ -1.78
Hoxd9P28357 Gm10400-201ENSMUST00000203920 3835 ntBASIC3.93□□□□□ -1.78
Hoxd9P28357 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC3.93□□□□□ -1.78
Hoxd9P28357 AC154738.5-201ENSMUST00000227397 310 ntBASIC3.93□□□□□ -1.78
Hoxd9P28357 Gm23462-201ENSMUST00000083264 104 ntBASIC3.93□□□□□ -1.78
Hoxd9P28357 Gm22868-201ENSMUST00000083955 164 ntBASIC3.93□□□□□ -1.78
Hoxd9P28357 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Hoxd9P28357 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
Hoxd9P28357 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Hoxd9P28357 Gm26135-201ENSMUST00000101993 72 ntBASIC3.92□□□□□ -1.78
Hoxd9P28357 Gm23322-201ENSMUST00000104464 167 ntBASIC3.92□□□□□ -1.78
Hoxd9P28357 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC3.92□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 484.5 ms