Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm42801-201ENSMUST00000202562 2865 ntBASIC1.65□□□□□ -2.15
Sdc1P18828 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc1P18828 AC167192.3-201ENSMUST00000224096 1567 ntBASIC1.64□□□□□ -2.15
Sdc1P18828 Gm13804-201ENSMUST00000119552 172 ntBASIC1.64□□□□□ -2.15
Sdc1P18828 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc1P18828 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC1.64□□□□□ -2.15
Sdc1P18828 Gm25153-201ENSMUST00000157118 156 ntBASIC1.64□□□□□ -2.15
Sdc1P18828 Gm25012-201ENSMUST00000158396 164 ntBASIC1.64□□□□□ -2.15
Sdc1P18828 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.64□□□□□ -2.15
Sdc1P18828 Mir7047-201ENSMUST00000184595 64 ntBASIC1.64□□□□□ -2.15
Sdc1P18828 Gm27544-201ENSMUST00000185069 155 ntBASIC1.64□□□□□ -2.15
Sdc1P18828 Gm29950-201ENSMUST00000195273 237 ntBASIC1.64□□□□□ -2.15
Sdc1P18828 Gm45252-201ENSMUST00000211579 397 ntBASIC1.64□□□□□ -2.15
Sdc1P18828 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC1.64□□□□□ -2.15
Sdc1P18828 AC116589.7-201ENSMUST00000221061 239 ntBASIC1.64□□□□□ -2.15
Sdc1P18828 AC164117.1-201ENSMUST00000221726 239 ntBASIC1.64□□□□□ -2.15
Sdc1P18828 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.64□□□□□ -2.15
Sdc1P18828 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.64□□□□□ -2.15
Sdc1P18828 Gm24151-201ENSMUST00000082758 141 ntBASIC1.64□□□□□ -2.15
Sdc1P18828 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc1P18828 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.63□□□□□ -2.15
Sdc1P18828 Gm26384-201ENSMUST00000102183 110 ntBASIC1.63□□□□□ -2.15
Sdc1P18828 Mir450-2-201ENSMUST00000102444 69 ntBASIC1.63□□□□□ -2.15
Sdc1P18828 Gm24982-201ENSMUST00000104456 132 ntBASIC1.63□□□□□ -2.15
Sdc1P18828 Gm12584-201ENSMUST00000117109 1105 ntBASIC1.63□□□□□ -2.15
Sdc1P18828 Gm15067-201ENSMUST00000119534 156 ntBASIC1.63□□□□□ -2.15
Sdc1P18828 Gm12926-201ENSMUST00000121158 409 ntBASIC1.63□□□□□ -2.15
Sdc1P18828 Gm14821-201ENSMUST00000121975 435 ntBASIC1.63□□□□□ -2.15
Sdc1P18828 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.63□□□□□ -2.15
Sdc1P18828 Mir1949-201ENSMUST00000157434 141 ntBASIC1.63□□□□□ -2.15
Sdc1P18828 Gm23641-201ENSMUST00000157857 101 ntBASIC1.63□□□□□ -2.15
Sdc1P18828 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC1.63□□□□□ -2.15
Sdc1P18828 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC1.63□□□□□ -2.15
Sdc1P18828 Gm23402-201ENSMUST00000178130 107 ntBASIC1.63□□□□□ -2.15
Sdc1P18828 Gm21885-201ENSMUST00000178891 327 ntBASIC1.63□□□□□ -2.15
Sdc1P18828 Mir6379-201ENSMUST00000183392 115 ntBASIC1.63□□□□□ -2.15
Sdc1P18828 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC1.63□□□□□ -2.15
Sdc1P18828 Gm35212-201ENSMUST00000196672 606 ntBASIC1.63□□□□□ -2.15
Sdc1P18828 Igkv11-118-201ENSMUST00000199448 346 ntBASIC1.63□□□□□ -2.15
Sdc1P18828 Gm43083-201ENSMUST00000199594 476 ntBASIC1.63□□□□□ -2.15
Sdc1P18828 Gm17906-201ENSMUST00000202480 901 ntBASIC1.63□□□□□ -2.15
Sdc1P18828 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC1.63□□□□□ -2.15
Sdc1P18828 Gm44526-201ENSMUST00000204664 121 ntBASIC1.63□□□□□ -2.15
Sdc1P18828 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Sdc1P18828 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Sdc1P18828 AC156790.3-201ENSMUST00000226200 254 ntBASIC1.63□□□□□ -2.15
Sdc1P18828 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Sdc1P18828 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Sdc1P18828 Gm22062-201ENSMUST00000082563 107 ntBASIC1.63□□□□□ -2.15
Sdc1P18828 Gm24165-201ENSMUST00000082718 128 ntBASIC1.63□□□□□ -2.15
Sdc1P18828 Gm24268-201ENSMUST00000082990 110 ntBASIC1.63□□□□□ -2.15
Sdc1P18828 Gm26126-201ENSMUST00000083188 164 ntBASIC1.63□□□□□ -2.15
Sdc1P18828 Mir29b-2-201ENSMUST00000083478 81 ntBASIC1.63□□□□□ -2.15
Sdc1P18828 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
Sdc1P18828 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Sdc1P18828 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Sdc1P18828 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Sdc1P18828 Gm25876-201ENSMUST00000104329 119 ntBASIC1.62□□□□□ -2.15
Sdc1P18828 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC1.62□□□□□ -2.15
Sdc1P18828 Gm12779-201ENSMUST00000121496 143 ntBASIC1.62□□□□□ -2.15
Sdc1P18828 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC1.62□□□□□ -2.15
Sdc1P18828 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
Sdc1P18828 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
Sdc1P18828 Gm25162-201ENSMUST00000158906 159 ntBASIC1.62□□□□□ -2.15
Sdc1P18828 Gm7592-201ENSMUST00000160674 627 ntBASIC1.62□□□□□ -2.15
Sdc1P18828 Gm22800-201ENSMUST00000175627 94 ntBASIC1.62□□□□□ -2.15
Sdc1P18828 Gm20689-201ENSMUST00000176033 279 ntBASIC1.62□□□□□ -2.15
Sdc1P18828 Gm24388-201ENSMUST00000177872 107 ntBASIC1.62□□□□□ -2.15
Sdc1P18828 Gm25933-201ENSMUST00000178943 108 ntBASIC1.62□□□□□ -2.15
Sdc1P18828 Gm26864-201ENSMUST00000181346 156 ntBASIC1.62□□□□□ -2.15
Sdc1P18828 Gm27490-201ENSMUST00000184754 128 ntBASIC1.62□□□□□ -2.15
Sdc1P18828 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC1.62□□□□□ -2.15
Sdc1P18828 Gm18692-201ENSMUST00000193047 511 ntBASIC1.62□□□□□ -2.15
Sdc1P18828 Gm44910-201ENSMUST00000208451 396 ntBASIC1.62□□□□□ -2.15
Sdc1P18828 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC1.62□□□□□ -2.15
Sdc1P18828 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC1.62□□□□□ -2.15
Sdc1P18828 AC167229.1-201ENSMUST00000220057 469 ntBASIC1.62□□□□□ -2.15
Sdc1P18828 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
Sdc1P18828 CT025689.4-201ENSMUST00000225926 601 ntBASIC1.62□□□□□ -2.15
Sdc1P18828 Gm37296-201ENSMUST00000192728 2922 ntBASIC1.61□□□□□ -2.15
Sdc1P18828 Mir3096-201ENSMUST00000116685 71 ntBASIC1.61□□□□□ -2.15
Sdc1P18828 Gm14709-201ENSMUST00000121225 304 ntBASIC1.61□□□□□ -2.15
Sdc1P18828 Gm14402-201ENSMUST00000122217 508 ntBASIC1.61□□□□□ -2.15
Sdc1P18828 Gm24237-201ENSMUST00000157790 132 ntBASIC1.61□□□□□ -2.15
Sdc1P18828 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Sdc1P18828 Gm24333-201ENSMUST00000175101 84 ntBASIC1.61□□□□□ -2.15
Sdc1P18828 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Sdc1P18828 Gm24862-201ENSMUST00000179103 79 ntBASIC1.61□□□□□ -2.15
Sdc1P18828 Gm23310-201ENSMUST00000179105 79 ntBASIC1.61□□□□□ -2.15
Sdc1P18828 Gm25461-201ENSMUST00000179293 79 ntBASIC1.61□□□□□ -2.15
Sdc1P18828 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC1.61□□□□□ -2.15
Sdc1P18828 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC1.61□□□□□ -2.15
Sdc1P18828 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC1.61□□□□□ -2.15
Sdc1P18828 Gm44923-201ENSMUST00000206673 85 ntBASIC1.61□□□□□ -2.15
Sdc1P18828 Gm44564-201ENSMUST00000207985 180 ntBASIC1.61□□□□□ -2.15
Sdc1P18828 Gm17990-201ENSMUST00000211728 553 ntBASIC1.61□□□□□ -2.15
Sdc1P18828 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.61□□□□□ -2.15
Sdc1P18828 Gm22978-201ENSMUST00000082607 160 ntBASIC1.61□□□□□ -2.15
Sdc1P18828 Gm22572-201ENSMUST00000082985 105 ntBASIC1.61□□□□□ -2.15
Sdc1P18828 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.61□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 99.9 ms