Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Cdx1P18111 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC1.65□□□□□ -2.15
Cdx1P18111 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.64□□□□□ -2.15
Cdx1P18111 Gm23472-201ENSMUST00000101806 191 ntBASIC1.64□□□□□ -2.15
Cdx1P18111 Gm13728-201ENSMUST00000117471 400 ntBASIC1.64□□□□□ -2.15
Cdx1P18111 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC1.64□□□□□ -2.15
Cdx1P18111 Gm14530-201ENSMUST00000122391 333 ntBASIC1.64□□□□□ -2.15
Cdx1P18111 Gm22073-201ENSMUST00000122668 189 ntBASIC1.64□□□□□ -2.15
Cdx1P18111 Gm23670-201ENSMUST00000157469 119 ntBASIC1.64□□□□□ -2.15
Cdx1P18111 Gm23548-201ENSMUST00000158963 106 ntBASIC1.64□□□□□ -2.15
Cdx1P18111 Gm16588-201ENSMUST00000162889 355 ntBASIC1.64□□□□□ -2.15
Cdx1P18111 Gm7953-201ENSMUST00000168278 469 ntBASIC1.64□□□□□ -2.15
Cdx1P18111 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC1.64□□□□□ -2.15
Cdx1P18111 Gm24497-201ENSMUST00000177868 191 ntBASIC1.64□□□□□ -2.15
Cdx1P18111 Gm25939-201ENSMUST00000179876 191 ntBASIC1.64□□□□□ -2.15
Cdx1P18111 Mir6950-201ENSMUST00000184438 73 ntBASIC1.64□□□□□ -2.15
Cdx1P18111 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC1.64□□□□□ -2.15
Cdx1P18111 Gm18453-201ENSMUST00000208000 626 ntBASIC1.64□□□□□ -2.15
Cdx1P18111 AC091260.1-201ENSMUST00000216112 229 ntBASIC1.64□□□□□ -2.15
Cdx1P18111 AC154521.1-201ENSMUST00000222635 330 ntBASIC1.64□□□□□ -2.15
Cdx1P18111 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Cdx1P18111 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.64□□□□□ -2.15
Cdx1P18111 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.64□□□□□ -2.15
Cdx1P18111 Gm25813-201ENSMUST00000082748 191 ntBASIC1.64□□□□□ -2.15
Cdx1P18111 Gm23444-201ENSMUST00000082922 191 ntBASIC1.64□□□□□ -2.15
Cdx1P18111 Gm24805-201ENSMUST00000082931 104 ntBASIC1.64□□□□□ -2.15
Cdx1P18111 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC1.64□□□□□ -2.15
Cdx1P18111 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC1.64□□□□□ -2.15
Cdx1P18111 Gm22678-201ENSMUST00000116974 101 ntBASIC1.63□□□□□ -2.15
Cdx1P18111 Gm12304-201ENSMUST00000120312 385 ntBASIC1.63□□□□□ -2.15
Cdx1P18111 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC1.63□□□□□ -2.15
Cdx1P18111 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Cdx1P18111 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC1.63□□□□□ -2.15
Cdx1P18111 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC1.63□□□□□ -2.15
Cdx1P18111 Mir6379-201ENSMUST00000183392 115 ntBASIC1.63□□□□□ -2.15
Cdx1P18111 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.63□□□□□ -2.15
Cdx1P18111 Gm44308-201ENSMUST00000197080 99 ntBASIC1.63□□□□□ -2.15
Cdx1P18111 Gm43512-201ENSMUST00000198495 176 ntBASIC1.63□□□□□ -2.15
Cdx1P18111 Gm43529-201ENSMUST00000199178 412 ntBASIC1.63□□□□□ -2.15
Cdx1P18111 Gm29848-201ENSMUST00000203107 295 ntBASIC1.63□□□□□ -2.15
Cdx1P18111 Gm17991-201ENSMUST00000208139 297 ntBASIC1.63□□□□□ -2.15
Cdx1P18111 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.63□□□□□ -2.15
Cdx1P18111 Gm20304-201ENSMUST00000218168 444 ntBASIC1.63□□□□□ -2.15
Cdx1P18111 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.63□□□□□ -2.15
Cdx1P18111 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC1.63□□□□□ -2.15
Cdx1P18111 AC165106.2-201ENSMUST00000226749 97 ntBASIC1.63□□□□□ -2.15
Cdx1P18111 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.63□□□□□ -2.15
Cdx1P18111 Gm22806-201ENSMUST00000082738 136 ntBASIC1.63□□□□□ -2.15
Cdx1P18111 Mir16-2-201ENSMUST00000083672 95 ntBASIC1.63□□□□□ -2.15
Cdx1P18111 Gm26175-201ENSMUST00000083794 131 ntBASIC1.63□□□□□ -2.15
Cdx1P18111 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Cdx1P18111 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Cdx1P18111 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Cdx1P18111 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
Cdx1P18111 Gm23950-201ENSMUST00000104026 129 ntBASIC1.62□□□□□ -2.15
Cdx1P18111 Gm23206-201ENSMUST00000122720 184 ntBASIC1.62□□□□□ -2.15
Cdx1P18111 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC1.62□□□□□ -2.15
Cdx1P18111 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.62□□□□□ -2.15
Cdx1P18111 Gm23043-201ENSMUST00000157890 109 ntBASIC1.62□□□□□ -2.15
Cdx1P18111 Gm22093-201ENSMUST00000158980 111 ntBASIC1.62□□□□□ -2.15
Cdx1P18111 Gm15914-201ENSMUST00000161922 309 ntBASIC1.62□□□□□ -2.15
Cdx1P18111 Gm25020-201ENSMUST00000178071 107 ntBASIC1.62□□□□□ -2.15
Cdx1P18111 Gm27028-201ENSMUST00000182303 399 ntBASIC1.62□□□□□ -2.15
Cdx1P18111 Gm9892-201ENSMUST00000182415 992 ntBASIC1.62□□□□□ -2.15
Cdx1P18111 Gm44384-201ENSMUST00000200208 114 ntBASIC1.62□□□□□ -2.15
Cdx1P18111 Gm18160-201ENSMUST00000214279 827 ntBASIC1.62□□□□□ -2.15
Cdx1P18111 Gm18703-201ENSMUST00000215318 333 ntBASIC1.62□□□□□ -2.15
Cdx1P18111 CT485612.4-201ENSMUST00000223405 250 ntBASIC1.62□□□□□ -2.15
Cdx1P18111 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Cdx1P18111 Gm22620-201ENSMUST00000082700 133 ntBASIC1.62□□□□□ -2.15
Cdx1P18111 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.62□□□□□ -2.15
Cdx1P18111 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC1.61□□□□□ -2.15
Cdx1P18111 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
Cdx1P18111 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.61□□□□□ -2.15
Cdx1P18111 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC1.61□□□□□ -2.15
Cdx1P18111 Gm14887-201ENSMUST00000119522 663 ntBASIC1.61□□□□□ -2.15
Cdx1P18111 Gm15807-201ENSMUST00000119880 1128 ntBASIC1.61□□□□□ -2.15
Cdx1P18111 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC1.61□□□□□ -2.15
Cdx1P18111 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC1.61□□□□□ -2.15
Cdx1P18111 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC1.61□□□□□ -2.15
Cdx1P18111 Gm26102-201ENSMUST00000157251 284 ntBASIC1.61□□□□□ -2.15
Cdx1P18111 Gm22843-201ENSMUST00000157710 134 ntBASIC1.61□□□□□ -2.15
Cdx1P18111 Gm24997-201ENSMUST00000157910 105 ntBASIC1.61□□□□□ -2.15
Cdx1P18111 Gm25012-201ENSMUST00000158396 164 ntBASIC1.61□□□□□ -2.15
Cdx1P18111 Gm22159-201ENSMUST00000158412 130 ntBASIC1.61□□□□□ -2.15
Cdx1P18111 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Cdx1P18111 Snord87-201ENSMUST00000175437 87 ntBASIC1.61□□□□□ -2.15
Cdx1P18111 Gm22584-201ENSMUST00000177935 92 ntBASIC1.61□□□□□ -2.15
Cdx1P18111 Gm25457-201ENSMUST00000179509 107 ntBASIC1.61□□□□□ -2.15
Cdx1P18111 Gm24306-201ENSMUST00000180229 79 ntBASIC1.61□□□□□ -2.15
Cdx1P18111 Mir6341-201ENSMUST00000183490 121 ntBASIC1.61□□□□□ -2.15
Cdx1P18111 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC1.61□□□□□ -2.15
Cdx1P18111 Gm44666-201ENSMUST00000208544 391 ntBASIC1.61□□□□□ -2.15
Cdx1P18111 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.61□□□□□ -2.15
Cdx1P18111 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.61□□□□□ -2.15
Cdx1P18111 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Cdx1P18111 Gm25636-201ENSMUST00000082666 133 ntBASIC1.61□□□□□ -2.15
Cdx1P18111 Mir29b-2-201ENSMUST00000083478 81 ntBASIC1.61□□□□□ -2.15
Cdx1P18111 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC1.61□□□□□ -2.15
Cdx1P18111 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 124.8 ms