Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm38109-201ENSMUST00000195386 181 ntBASIC1.59□□□□□ -2.15
Col5a1O88207 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.15
Col5a1O88207 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.15
Col5a1O88207 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Col5a1O88207 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1.59□□□□□ -2.15
Col5a1O88207 AC154506.1-201ENSMUST00000225178 621 ntBASIC1.59□□□□□ -2.15
Col5a1O88207 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Col5a1O88207 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Col5a1O88207 Gm17976-201ENSMUST00000184037 1909 ntBASIC1.59□□□□□ -2.15
Col5a1O88207 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
Col5a1O88207 Mir19b-1-201ENSMUST00000102301 87 ntBASIC1.59□□□□□ -2.16
Col5a1O88207 Mir667-201ENSMUST00000102441 92 ntBASIC1.59□□□□□ -2.16
Col5a1O88207 Gm14537-201ENSMUST00000117464 599 ntBASIC1.59□□□□□ -2.16
Col5a1O88207 Gm2066-201ENSMUST00000118046 389 ntBASIC1.59□□□□□ -2.16
Col5a1O88207 Gm14362-201ENSMUST00000121679 273 ntBASIC1.59□□□□□ -2.16
Col5a1O88207 Gm14129-201ENSMUST00000122436 291 ntBASIC1.59□□□□□ -2.16
Col5a1O88207 Gm25294-201ENSMUST00000122791 104 ntBASIC1.59□□□□□ -2.16
Col5a1O88207 Gm15254-201ENSMUST00000149567 273 ntBASIC1.59□□□□□ -2.16
Col5a1O88207 Igkv17-134-201ENSMUST00000168310 348 ntBASIC1.59□□□□□ -2.16
Col5a1O88207 Gm23813-201ENSMUST00000175153 77 ntBASIC1.59□□□□□ -2.16
Col5a1O88207 Mir5101-201ENSMUST00000175181 83 ntBASIC1.59□□□□□ -2.16
Col5a1O88207 Gm21754-201ENSMUST00000177550 479 ntBASIC1.59□□□□□ -2.16
Col5a1O88207 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
Col5a1O88207 Gm21729-201ENSMUST00000180058 664 ntBASIC1.59□□□□□ -2.16
Col5a1O88207 Gm21853-201ENSMUST00000180071 664 ntBASIC1.59□□□□□ -2.16
Col5a1O88207 Mir6382-201ENSMUST00000184055 110 ntBASIC1.59□□□□□ -2.16
Col5a1O88207 Gm7654-201ENSMUST00000186738 683 ntBASIC1.59□□□□□ -2.16
Col5a1O88207 Gm29647-201ENSMUST00000188795 666 ntBASIC1.59□□□□□ -2.16
Col5a1O88207 Gm29495-201ENSMUST00000189319 664 ntBASIC1.59□□□□□ -2.16
Col5a1O88207 Gm6801-201ENSMUST00000190697 339 ntBASIC1.59□□□□□ -2.16
Col5a1O88207 Gm28504-201ENSMUST00000190977 666 ntBASIC1.59□□□□□ -2.16
Col5a1O88207 Gm35843-201ENSMUST00000193716 666 ntBASIC1.59□□□□□ -2.16
Col5a1O88207 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC1.59□□□□□ -2.16
Col5a1O88207 Gm43367-201ENSMUST00000199986 625 ntBASIC1.59□□□□□ -2.16
Col5a1O88207 Gm44818-201ENSMUST00000206608 358 ntBASIC1.59□□□□□ -2.16
Col5a1O88207 Gm44923-201ENSMUST00000206673 85 ntBASIC1.59□□□□□ -2.16
Col5a1O88207 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC1.59□□□□□ -2.16
Col5a1O88207 CT025526.1-201ENSMUST00000217327 267 ntBASIC1.59□□□□□ -2.16
Col5a1O88207 Gm5955-201ENSMUST00000222712 219 ntBASIC1.59□□□□□ -2.16
Col5a1O88207 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
Col5a1O88207 Gm23249-201ENSMUST00000083369 161 ntBASIC1.59□□□□□ -2.16
Col5a1O88207 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC1.59□□□□□ -2.16
Col5a1O88207 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.58□□□□□ -2.16
Col5a1O88207 Gm4855-201ENSMUST00000192270 1967 ntBASIC1.58□□□□□ -2.16
Col5a1O88207 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC1.58□□□□□ -2.16
Col5a1O88207 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Col5a1O88207 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC1.58□□□□□ -2.16
Col5a1O88207 Gm14008-201ENSMUST00000120483 274 ntBASIC1.58□□□□□ -2.16
Col5a1O88207 Gm20526-201ENSMUST00000173416 158 ntBASIC1.58□□□□□ -2.16
Col5a1O88207 Gm22166-201ENSMUST00000178419 121 ntBASIC1.58□□□□□ -2.16
Col5a1O88207 Hmga1b-202ENSMUST00000178955 120 ntBASIC1.58□□□□□ -2.16
Col5a1O88207 Gm23288-201ENSMUST00000179213 121 ntBASIC1.58□□□□□ -2.16
Col5a1O88207 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Col5a1O88207 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC1.58□□□□□ -2.16
Col5a1O88207 Gm28299-201ENSMUST00000189908 339 ntBASIC1.58□□□□□ -2.16
Col5a1O88207 Gm37869-201ENSMUST00000193385 595 ntBASIC1.58□□□□□ -2.16
Col5a1O88207 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.58□□□□□ -2.16
Col5a1O88207 Gm43193-201ENSMUST00000197732 441 ntBASIC1.58□□□□□ -2.16
Col5a1O88207 Gm43513-201ENSMUST00000199779 1076 ntBASIC1.58□□□□□ -2.16
Col5a1O88207 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Col5a1O88207 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC1.58□□□□□ -2.16
Col5a1O88207 AC122418.1-201ENSMUST00000225012 511 ntBASIC1.58□□□□□ -2.16
Col5a1O88207 AC101945.3-201ENSMUST00000226568 153 ntBASIC1.58□□□□□ -2.16
Col5a1O88207 AC123656.2-201ENSMUST00000226726 227 ntBASIC1.58□□□□□ -2.16
Col5a1O88207 AC117588.2-201ENSMUST00000228340 311 ntBASIC1.58□□□□□ -2.16
Col5a1O88207 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Col5a1O88207 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.58□□□□□ -2.16
Col5a1O88207 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Col5a1O88207 AC163660.3-201ENSMUST00000224253 1563 ntBASIC1.57□□□□□ -2.16
Col5a1O88207 n-R5s26-201ENSMUST00000104601 122 ntBASIC1.57□□□□□ -2.16
Col5a1O88207 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Col5a1O88207 Gm12640-201ENSMUST00000120097 310 ntBASIC1.57□□□□□ -2.16
Col5a1O88207 Gm11438-201ENSMUST00000121582 189 ntBASIC1.57□□□□□ -2.16
Col5a1O88207 Gm22755-201ENSMUST00000157143 100 ntBASIC1.57□□□□□ -2.16
Col5a1O88207 Gm22080-201ENSMUST00000157591 106 ntBASIC1.57□□□□□ -2.16
Col5a1O88207 Gm24770-201ENSMUST00000158505 92 ntBASIC1.57□□□□□ -2.16
Col5a1O88207 Gm23312-201ENSMUST00000158774 102 ntBASIC1.57□□□□□ -2.16
Col5a1O88207 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Col5a1O88207 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC1.57□□□□□ -2.16
Col5a1O88207 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC1.57□□□□□ -2.16
Col5a1O88207 Gm27477-201ENSMUST00000184649 143 ntBASIC1.57□□□□□ -2.16
Col5a1O88207 Gm27979-201ENSMUST00000185126 56 ntBASIC1.57□□□□□ -2.16
Col5a1O88207 Gm44465-201ENSMUST00000199536 114 ntBASIC1.57□□□□□ -2.16
Col5a1O88207 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC1.57□□□□□ -2.16
Col5a1O88207 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC1.57□□□□□ -2.16
Col5a1O88207 AC167192.2-201ENSMUST00000224794 198 ntBASIC1.57□□□□□ -2.16
Col5a1O88207 CT025689.4-201ENSMUST00000225926 601 ntBASIC1.57□□□□□ -2.16
Col5a1O88207 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Col5a1O88207 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Col5a1O88207 Rny3-201ENSMUST00000083011 102 ntBASIC1.57□□□□□ -2.16
Col5a1O88207 Gm44679-201ENSMUST00000207202 2908 ntBASIC1.57□□□□□ -2.16
Col5a1O88207 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Col5a1O88207 Mir450-2-201ENSMUST00000102444 69 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Col5a1O88207 Gm14624-201ENSMUST00000117746 192 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 Gm14918-201ENSMUST00000118153 268 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC1.56□□□□□ -2.16
Col5a1O88207 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC1.56□□□□□ -2.16
Col5a1O88207 Mup-ps12-201ENSMUST00000126217 549 ntBASIC1.56□□□□□ -2.16
Col5a1O88207 Gm23167-201ENSMUST00000157155 103 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms