Protein–RNA interactions for Protein: O54786

Dffa, DNA fragmentation factor subunit alpha, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffaO54786 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.05□□□□□ -2.24
DffaO54786 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.05□□□□□ -2.24
DffaO54786 Mir1967-201ENSMUST00000157789 82 ntBASIC1.05□□□□□ -2.24
DffaO54786 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
DffaO54786 Gm27588-201ENSMUST00000185096 263 ntBASIC1.05□□□□□ -2.24
DffaO54786 Gm29397-201ENSMUST00000185205 333 ntBASIC1.05□□□□□ -2.24
DffaO54786 Gm43199-201ENSMUST00000200019 307 ntBASIC1.05□□□□□ -2.24
DffaO54786 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC1.05□□□□□ -2.24
DffaO54786 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
DffaO54786 Gm44088-201ENSMUST00000204595 237 ntBASIC1.05□□□□□ -2.24
DffaO54786 AC147240.1-201ENSMUST00000218767 431 ntBASIC1.05□□□□□ -2.24
DffaO54786 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC1.05□□□□□ -2.24
DffaO54786 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.05□□□□□ -2.24
DffaO54786 AC158521.1-201ENSMUST00000225295 660 ntBASIC1.05□□□□□ -2.24
DffaO54786 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.05□□□□□ -2.24
DffaO54786 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.05□□□□□ -2.24
DffaO54786 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.05□□□□□ -2.24
DffaO54786 Gm14793-201ENSMUST00000118739 311 ntBASIC1.04□□□□□ -2.24
DffaO54786 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.04□□□□□ -2.24
DffaO54786 Gm23587-201ENSMUST00000157658 84 ntBASIC1.04□□□□□ -2.24
DffaO54786 Gm25243-201ENSMUST00000174912 207 ntBASIC1.04□□□□□ -2.24
DffaO54786 Gm18397-201ENSMUST00000176704 587 ntBASIC1.04□□□□□ -2.24
DffaO54786 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC1.04□□□□□ -2.24
DffaO54786 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC1.04□□□□□ -2.24
DffaO54786 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC1.04□□□□□ -2.24
DffaO54786 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.04□□□□□ -2.24
DffaO54786 Gm45268-201ENSMUST00000210046 370 ntBASIC1.04□□□□□ -2.24
DffaO54786 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.04□□□□□ -2.24
DffaO54786 Gm24622-201ENSMUST00000082619 162 ntBASIC1.04□□□□□ -2.24
DffaO54786 Gm22997-201ENSMUST00000082845 107 ntBASIC1.04□□□□□ -2.24
DffaO54786 Gm22496-201ENSMUST00000104493 88 ntBASIC1.03□□□□□ -2.24
DffaO54786 Gm11813-201ENSMUST00000118586 291 ntBASIC1.03□□□□□ -2.24
DffaO54786 Gm15090-201ENSMUST00000118787 1196 ntBASIC1.03□□□□□ -2.24
DffaO54786 Gm12639-201ENSMUST00000121400 493 ntBASIC1.03□□□□□ -2.24
DffaO54786 Gm6025-201ENSMUST00000121517 201 ntBASIC1.03□□□□□ -2.24
DffaO54786 Gm12045-201ENSMUST00000122122 573 ntBASIC1.03□□□□□ -2.24
DffaO54786 Gm15089-201ENSMUST00000122332 1196 ntBASIC1.03□□□□□ -2.24
DffaO54786 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.03□□□□□ -2.24
DffaO54786 Gm24632-201ENSMUST00000122770 323 ntBASIC1.03□□□□□ -2.24
DffaO54786 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
DffaO54786 Gm8121-201ENSMUST00000153583 499 ntBASIC1.03□□□□□ -2.24
DffaO54786 Gm22338-201ENSMUST00000157715 129 ntBASIC1.03□□□□□ -2.24
DffaO54786 Gm25175-201ENSMUST00000178712 79 ntBASIC1.03□□□□□ -2.24
DffaO54786 Gm37568-201ENSMUST00000191755 364 ntBASIC1.03□□□□□ -2.24
DffaO54786 Ighv12-1-201ENSMUST00000195542 329 ntBASIC1.03□□□□□ -2.24
DffaO54786 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC1.03□□□□□ -2.24
DffaO54786 Gm44011-201ENSMUST00000203336 394 ntBASIC1.03□□□□□ -2.24
DffaO54786 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.03□□□□□ -2.24
DffaO54786 AC135292.1-201ENSMUST00000227665 204 ntBASIC1.03□□□□□ -2.24
DffaO54786 Gm22061-201ENSMUST00000082557 107 ntBASIC1.03□□□□□ -2.24
DffaO54786 Gm3563-201ENSMUST00000172963 1628 ntBASIC1.03□□□□□ -2.24
DffaO54786 Gm381-201ENSMUST00000117443 2037 ntBASIC1.02□□□□□ -2.25
DffaO54786 Gm13672-201ENSMUST00000117554 459 ntBASIC1.02□□□□□ -2.25
DffaO54786 Gm22768-201ENSMUST00000158366 153 ntBASIC1.02□□□□□ -2.25
DffaO54786 Gm25768-201ENSMUST00000158570 98 ntBASIC1.02□□□□□ -2.25
DffaO54786 Gm22074-201ENSMUST00000158595 113 ntBASIC1.02□□□□□ -2.25
DffaO54786 Traj60-201ENSMUST00000167781 54 ntBASIC1.02□□□□□ -2.25
DffaO54786 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC1.02□□□□□ -2.25
DffaO54786 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
DffaO54786 Gm29288-201ENSMUST00000191582 901 ntBASIC1.02□□□□□ -2.25
DffaO54786 Gm37005-201ENSMUST00000193281 1164 ntBASIC1.02□□□□□ -2.25
DffaO54786 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC1.02□□□□□ -2.25
DffaO54786 Gm18598-201ENSMUST00000207724 597 ntBASIC1.02□□□□□ -2.25
DffaO54786 Gm44666-201ENSMUST00000208544 391 ntBASIC1.02□□□□□ -2.25
DffaO54786 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.02□□□□□ -2.25
DffaO54786 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
DffaO54786 Gm43924-201ENSMUST00000204851 1736 ntBASIC1.01□□□□□ -2.25
DffaO54786 Gm24582-201ENSMUST00000103967 103 ntBASIC1.01□□□□□ -2.25
DffaO54786 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.01□□□□□ -2.25
DffaO54786 Gm13885-201ENSMUST00000117569 187 ntBASIC1.01□□□□□ -2.25
DffaO54786 Gm12825-201ENSMUST00000120249 563 ntBASIC1.01□□□□□ -2.25
DffaO54786 Gm12044-201ENSMUST00000120335 213 ntBASIC1.01□□□□□ -2.25
DffaO54786 Gm12881-201ENSMUST00000121191 203 ntBASIC1.01□□□□□ -2.25
DffaO54786 Gm12372-201ENSMUST00000121654 768 ntBASIC1.01□□□□□ -2.25
DffaO54786 Gm25454-201ENSMUST00000157947 315 ntBASIC1.01□□□□□ -2.25
DffaO54786 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC1.01□□□□□ -2.25
DffaO54786 Gm2878-201ENSMUST00000170173 486 ntBASIC1.01□□□□□ -2.25
DffaO54786 Gm28200-201ENSMUST00000187778 315 ntBASIC1.01□□□□□ -2.25
DffaO54786 Gm29378-201ENSMUST00000188723 315 ntBASIC1.01□□□□□ -2.25
DffaO54786 Gm28909-201ENSMUST00000189406 315 ntBASIC1.01□□□□□ -2.25
DffaO54786 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC1.01□□□□□ -2.25
DffaO54786 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC1.01□□□□□ -2.25
DffaO54786 Gm45439-201ENSMUST00000211723 359 ntBASIC1.01□□□□□ -2.25
DffaO54786 AC125464.1-201ENSMUST00000228013 512 ntBASIC1.01□□□□□ -2.25
DffaO54786 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.01□□□□□ -2.25
DffaO54786 Gm22974-201ENSMUST00000083301 103 ntBASIC1.01□□□□□ -2.25
DffaO54786 Gm12636-201ENSMUST00000117395 624 ntBASIC1□□□□□ -2.25
DffaO54786 Gm14215-201ENSMUST00000120578 221 ntBASIC1□□□□□ -2.25
DffaO54786 Gm14600-201ENSMUST00000121032 630 ntBASIC1□□□□□ -2.25
DffaO54786 Gm16129-201ENSMUST00000152628 486 ntBASIC1□□□□□ -2.25
DffaO54786 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC1□□□□□ -2.25
DffaO54786 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC1□□□□□ -2.25
DffaO54786 Gm25020-201ENSMUST00000178071 107 ntBASIC1□□□□□ -2.25
DffaO54786 Gm27861-201ENSMUST00000183920 214 ntBASIC1□□□□□ -2.25
DffaO54786 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1□□□□□ -2.25
DffaO54786 Mir8090-201ENSMUST00000185078 136 ntBASIC1□□□□□ -2.25
DffaO54786 Gm28437-201ENSMUST00000190277 783 ntBASIC1□□□□□ -2.25
DffaO54786 Gm38154-201ENSMUST00000195444 340 ntBASIC1□□□□□ -2.25
DffaO54786 AL928567.1-201ENSMUST00000197891 138 ntBASIC1□□□□□ -2.25
DffaO54786 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC1□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 95.1 ms