Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Gm37037-201ENSMUST00000194475 424 ntBASIC2.42□□□□□ -2.02
Trav13d-3J3QMG8 Gm43238-201ENSMUST00000196463 359 ntBASIC2.42□□□□□ -2.02
Trav13d-3J3QMG8 Gm43578-201ENSMUST00000201250 459 ntBASIC2.42□□□□□ -2.02
Trav13d-3J3QMG8 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC2.42□□□□□ -2.02
Trav13d-3J3QMG8 Gm45315-201ENSMUST00000209283 333 ntBASIC2.42□□□□□ -2.02
Trav13d-3J3QMG8 Gm45375-201ENSMUST00000210338 280 ntBASIC2.42□□□□□ -2.02
Trav13d-3J3QMG8 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC2.42□□□□□ -2.02
Trav13d-3J3QMG8 Gm10264-201ENSMUST00000220589 429 ntBASIC2.42□□□□□ -2.02
Trav13d-3J3QMG8 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC2.42□□□□□ -2.02
Trav13d-3J3QMG8 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.42□□□□□ -2.02
Trav13d-3J3QMG8 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Trav13d-3J3QMG8 Gm26458-201ENSMUST00000082832 128 ntBASIC2.42□□□□□ -2.02
Trav13d-3J3QMG8 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.42□□□□□ -2.02
Trav13d-3J3QMG8 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trav13d-3J3QMG8 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.42□□□□□ -2.02
Trav13d-3J3QMG8 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.41□□□□□ -2.02
Trav13d-3J3QMG8 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
Trav13d-3J3QMG8 Gm15846-201ENSMUST00000116022 320 ntBASIC2.41□□□□□ -2.02
Trav13d-3J3QMG8 Gm14843-201ENSMUST00000119596 212 ntBASIC2.41□□□□□ -2.02
Trav13d-3J3QMG8 Gm24481-201ENSMUST00000157210 102 ntBASIC2.41□□□□□ -2.02
Trav13d-3J3QMG8 Gm25280-201ENSMUST00000157269 101 ntBASIC2.41□□□□□ -2.02
Trav13d-3J3QMG8 Gm23641-201ENSMUST00000157857 101 ntBASIC2.41□□□□□ -2.02
Trav13d-3J3QMG8 Gm24857-201ENSMUST00000158061 310 ntBASIC2.41□□□□□ -2.02
Trav13d-3J3QMG8 Gm27510-201ENSMUST00000158214 64 ntBASIC2.41□□□□□ -2.02
Trav13d-3J3QMG8 Gm4468-201ENSMUST00000170206 294 ntBASIC2.41□□□□□ -2.02
Trav13d-3J3QMG8 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.41□□□□□ -2.02
Trav13d-3J3QMG8 Mir7242-201ENSMUST00000183710 79 ntBASIC2.41□□□□□ -2.02
Trav13d-3J3QMG8 Gm6060-201ENSMUST00000188671 251 ntBASIC2.41□□□□□ -2.02
Trav13d-3J3QMG8 Gm34073-201ENSMUST00000195736 212 ntBASIC2.41□□□□□ -2.02
Trav13d-3J3QMG8 Gm43521-201ENSMUST00000197838 255 ntBASIC2.41□□□□□ -2.02
Trav13d-3J3QMG8 Gm43107-201ENSMUST00000198729 255 ntBASIC2.41□□□□□ -2.02
Trav13d-3J3QMG8 Gm44844-201ENSMUST00000207242 336 ntBASIC2.41□□□□□ -2.02
Trav13d-3J3QMG8 Gm45704-201ENSMUST00000212582 403 ntBASIC2.41□□□□□ -2.02
Trav13d-3J3QMG8 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.41□□□□□ -2.02
Trav13d-3J3QMG8 Gm30534-201ENSMUST00000217928 207 ntBASIC2.41□□□□□ -2.02
Trav13d-3J3QMG8 Gm33654-201ENSMUST00000221704 215 ntBASIC2.41□□□□□ -2.02
Trav13d-3J3QMG8 Gm21937-201ENSMUST00000222825 218 ntBASIC2.41□□□□□ -2.02
Trav13d-3J3QMG8 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Trav13d-3J3QMG8 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.41□□□□□ -2.02
Trav13d-3J3QMG8 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Trav13d-3J3QMG8 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC2.41□□□□□ -2.02
Trav13d-3J3QMG8 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.41□□□□□ -2.02
Trav13d-3J3QMG8 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Trav13d-3J3QMG8 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Trav13d-3J3QMG8 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.02
Trav13d-3J3QMG8 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.4□□□□□ -2.02
Trav13d-3J3QMG8 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
Trav13d-3J3QMG8 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
Trav13d-3J3QMG8 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.4□□□□□ -2.02
Trav13d-3J3QMG8 Gm24338-201ENSMUST00000104205 127 ntBASIC2.4□□□□□ -2.03
Trav13d-3J3QMG8 Gm13457-201ENSMUST00000117885 267 ntBASIC2.4□□□□□ -2.03
Trav13d-3J3QMG8 Gm16171-201ENSMUST00000118004 324 ntBASIC2.4□□□□□ -2.03
Trav13d-3J3QMG8 Gm26027-201ENSMUST00000122725 268 ntBASIC2.4□□□□□ -2.03
Trav13d-3J3QMG8 Gm23435-201ENSMUST00000157183 156 ntBASIC2.4□□□□□ -2.03
Trav13d-3J3QMG8 Gm24846-201ENSMUST00000158033 108 ntBASIC2.4□□□□□ -2.03
Trav13d-3J3QMG8 Gm22382-201ENSMUST00000158185 130 ntBASIC2.4□□□□□ -2.03
Trav13d-3J3QMG8 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Trav13d-3J3QMG8 Gm27330-201ENSMUST00000184689 132 ntBASIC2.4□□□□□ -2.03
Trav13d-3J3QMG8 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Trav13d-3J3QMG8 Gm43286-201ENSMUST00000197420 424 ntBASIC2.4□□□□□ -2.03
Trav13d-3J3QMG8 Gm43193-201ENSMUST00000197732 441 ntBASIC2.4□□□□□ -2.03
Trav13d-3J3QMG8 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
Trav13d-3J3QMG8 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Trav13d-3J3QMG8 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
Trav13d-3J3QMG8 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
Trav13d-3J3QMG8 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.4□□□□□ -2.03
Trav13d-3J3QMG8 Gm24582-201ENSMUST00000103967 103 ntBASIC2.39□□□□□ -2.03
Trav13d-3J3QMG8 Gm12513-201ENSMUST00000118617 352 ntBASIC2.39□□□□□ -2.03
Trav13d-3J3QMG8 Gm12412-201ENSMUST00000121867 328 ntBASIC2.39□□□□□ -2.03
Trav13d-3J3QMG8 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Trav13d-3J3QMG8 Gm26102-201ENSMUST00000157251 284 ntBASIC2.39□□□□□ -2.03
Trav13d-3J3QMG8 Gm22651-201ENSMUST00000157872 94 ntBASIC2.39□□□□□ -2.03
Trav13d-3J3QMG8 Gm22654-201ENSMUST00000157874 105 ntBASIC2.39□□□□□ -2.03
Trav13d-3J3QMG8 Gm23476-201ENSMUST00000158881 274 ntBASIC2.39□□□□□ -2.03
Trav13d-3J3QMG8 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Trav13d-3J3QMG8 Gm5224-201ENSMUST00000183060 350 ntBASIC2.39□□□□□ -2.03
Trav13d-3J3QMG8 Gm27786-201ENSMUST00000184337 70 ntBASIC2.39□□□□□ -2.03
Trav13d-3J3QMG8 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC2.39□□□□□ -2.03
Trav13d-3J3QMG8 Gm28740-201ENSMUST00000186142 215 ntBASIC2.39□□□□□ -2.03
Trav13d-3J3QMG8 Gm6801-201ENSMUST00000190697 339 ntBASIC2.39□□□□□ -2.03
Trav13d-3J3QMG8 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC2.39□□□□□ -2.03
Trav13d-3J3QMG8 Gm43510-201ENSMUST00000197922 353 ntBASIC2.39□□□□□ -2.03
Trav13d-3J3QMG8 Gm42739-201ENSMUST00000200687 226 ntBASIC2.39□□□□□ -2.03
Trav13d-3J3QMG8 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.39□□□□□ -2.03
Trav13d-3J3QMG8 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Trav13d-3J3QMG8 Gm22364-201ENSMUST00000083097 98 ntBASIC2.39□□□□□ -2.03
Trav13d-3J3QMG8 Gm23264-201ENSMUST00000083372 107 ntBASIC2.39□□□□□ -2.03
Trav13d-3J3QMG8 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
Trav13d-3J3QMG8 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Trav13d-3J3QMG8 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Trav13d-3J3QMG8 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.38□□□□□ -2.03
Trav13d-3J3QMG8 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC2.38□□□□□ -2.03
Trav13d-3J3QMG8 Gm24982-201ENSMUST00000104456 132 ntBASIC2.38□□□□□ -2.03
Trav13d-3J3QMG8 Gm25539-201ENSMUST00000116886 122 ntBASIC2.38□□□□□ -2.03
Trav13d-3J3QMG8 Gm15211-201ENSMUST00000118932 528 ntBASIC2.38□□□□□ -2.03
Trav13d-3J3QMG8 Gm13443-201ENSMUST00000120770 555 ntBASIC2.38□□□□□ -2.03
Trav13d-3J3QMG8 Gm26186-201ENSMUST00000157689 125 ntBASIC2.38□□□□□ -2.03
Trav13d-3J3QMG8 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
Trav13d-3J3QMG8 Gm24085-201ENSMUST00000175172 116 ntBASIC2.38□□□□□ -2.03
Trav13d-3J3QMG8 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC2.38□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms