Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm22304-201ENSMUST00000082688 129 ntBASIC3.4□□□□□ -1.87
Pcdh1F7BJK1 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
Pcdh1F7BJK1 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Pcdh1F7BJK1 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.39□□□□□ -1.87
Pcdh1F7BJK1 AC117226.1-201ENSMUST00000221635 3737 ntBASIC3.39□□□□□ -1.87
Pcdh1F7BJK1 Gm23481-201ENSMUST00000104173 131 ntBASIC3.39□□□□□ -1.87
Pcdh1F7BJK1 Mir872-201ENSMUST00000104728 81 ntBASIC3.39□□□□□ -1.87
Pcdh1F7BJK1 Mdga2-203ENSMUST00000113942 423 ntBASIC3.39□□□□□ -1.87
Pcdh1F7BJK1 Gm9157-201ENSMUST00000117673 225 ntBASIC3.39□□□□□ -1.87
Pcdh1F7BJK1 Gm12252-201ENSMUST00000119517 219 ntBASIC3.39□□□□□ -1.87
Pcdh1F7BJK1 Gm25914-201ENSMUST00000157618 153 ntBASIC3.39□□□□□ -1.87
Pcdh1F7BJK1 Gm20693-201ENSMUST00000177431 211 ntBASIC3.39□□□□□ -1.87
Pcdh1F7BJK1 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Pcdh1F7BJK1 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.39□□□□□ -1.87
Pcdh1F7BJK1 Mir6907-201ENSMUST00000183764 71 ntBASIC3.39□□□□□ -1.87
Pcdh1F7BJK1 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.39□□□□□ -1.87
Pcdh1F7BJK1 Gm25930-201ENSMUST00000082785 107 ntBASIC3.39□□□□□ -1.87
Pcdh1F7BJK1 Snord82-201ENSMUST00000082889 70 ntBASIC3.39□□□□□ -1.87
Pcdh1F7BJK1 Gm23443-201ENSMUST00000082916 128 ntBASIC3.39□□□□□ -1.87
Pcdh1F7BJK1 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Pcdh1F7BJK1 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Pcdh1F7BJK1 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Pcdh1F7BJK1 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.38□□□□□ -1.87
Pcdh1F7BJK1 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Pcdh1F7BJK1 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Pcdh1F7BJK1 Gm15936-201ENSMUST00000118706 460 ntBASIC3.38□□□□□ -1.87
Pcdh1F7BJK1 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC3.38□□□□□ -1.87
Pcdh1F7BJK1 Gm24850-201ENSMUST00000158029 119 ntBASIC3.38□□□□□ -1.87
Pcdh1F7BJK1 Ear-ps8-201ENSMUST00000161935 354 ntBASIC3.38□□□□□ -1.87
Pcdh1F7BJK1 Gm24106-201ENSMUST00000175498 127 ntBASIC3.38□□□□□ -1.87
Pcdh1F7BJK1 Gm26200-201ENSMUST00000180273 79 ntBASIC3.38□□□□□ -1.87
Pcdh1F7BJK1 Gm6947-201ENSMUST00000186254 78 ntBASIC3.38□□□□□ -1.87
Pcdh1F7BJK1 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC3.38□□□□□ -1.87
Pcdh1F7BJK1 Gm28155-201ENSMUST00000191066 151 ntBASIC3.38□□□□□ -1.87
Pcdh1F7BJK1 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Pcdh1F7BJK1 Gm6796-201ENSMUST00000211919 243 ntBASIC3.38□□□□□ -1.87
Pcdh1F7BJK1 Gm30674-201ENSMUST00000214523 392 ntBASIC3.38□□□□□ -1.87
Pcdh1F7BJK1 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC3.38□□□□□ -1.87
Pcdh1F7BJK1 AC121942.2-201ENSMUST00000223824 600 ntBASIC3.38□□□□□ -1.87
Pcdh1F7BJK1 Gm25481-201ENSMUST00000083221 158 ntBASIC3.38□□□□□ -1.87
Pcdh1F7BJK1 Snord14d-201ENSMUST00000083424 86 ntBASIC3.38□□□□□ -1.87
Pcdh1F7BJK1 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.38□□□□□ -1.87
Pcdh1F7BJK1 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Pcdh1F7BJK1 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Pcdh1F7BJK1 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Pcdh1F7BJK1 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Pcdh1F7BJK1 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Pcdh1F7BJK1 Gm4746-201ENSMUST00000120395 2406 ntBASIC3.38□□□□□ -1.87
Pcdh1F7BJK1 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Pcdh1F7BJK1 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Pcdh1F7BJK1 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Pcdh1F7BJK1 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Pcdh1F7BJK1 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.37□□□□□ -1.87
Pcdh1F7BJK1 Gm25543-201ENSMUST00000122678 312 ntBASIC3.37□□□□□ -1.87
Pcdh1F7BJK1 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC3.37□□□□□ -1.87
Pcdh1F7BJK1 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.37□□□□□ -1.87
Pcdh1F7BJK1 Gm25115-201ENSMUST00000157187 140 ntBASIC3.37□□□□□ -1.87
Pcdh1F7BJK1 Gm22215-201ENSMUST00000157558 96 ntBASIC3.37□□□□□ -1.87
Pcdh1F7BJK1 Gm24959-201ENSMUST00000157924 146 ntBASIC3.37□□□□□ -1.87
Pcdh1F7BJK1 Gm22537-201ENSMUST00000158172 199 ntBASIC3.37□□□□□ -1.87
Pcdh1F7BJK1 Gm23571-201ENSMUST00000180073 127 ntBASIC3.37□□□□□ -1.87
Pcdh1F7BJK1 Gm8790-201ENSMUST00000194108 322 ntBASIC3.37□□□□□ -1.87
Pcdh1F7BJK1 Gm43853-201ENSMUST00000197162 301 ntBASIC3.37□□□□□ -1.87
Pcdh1F7BJK1 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.37□□□□□ -1.87
Pcdh1F7BJK1 Gm8820-201ENSMUST00000204077 571 ntBASIC3.37□□□□□ -1.87
Pcdh1F7BJK1 Gm18188-201ENSMUST00000219386 478 ntBASIC3.37□□□□□ -1.87
Pcdh1F7BJK1 Gm25081-201ENSMUST00000082534 108 ntBASIC3.37□□□□□ -1.87
Pcdh1F7BJK1 Gm24356-201ENSMUST00000082859 106 ntBASIC3.37□□□□□ -1.87
Pcdh1F7BJK1 Gm24204-201ENSMUST00000082950 107 ntBASIC3.37□□□□□ -1.87
Pcdh1F7BJK1 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.37□□□□□ -1.87
Pcdh1F7BJK1 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Pcdh1F7BJK1 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Pcdh1F7BJK1 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.36□□□□□ -1.87
Pcdh1F7BJK1 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Pcdh1F7BJK1 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Pcdh1F7BJK1 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Pcdh1F7BJK1 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Pcdh1F7BJK1 Gm26018-201ENSMUST00000104406 128 ntBASIC3.36□□□□□ -1.87
Pcdh1F7BJK1 Gm24132-201ENSMUST00000104745 91 ntBASIC3.36□□□□□ -1.87
Pcdh1F7BJK1 Gm15714-201ENSMUST00000117168 250 ntBASIC3.36□□□□□ -1.87
Pcdh1F7BJK1 Gm13355-201ENSMUST00000117996 317 ntBASIC3.36□□□□□ -1.87
Pcdh1F7BJK1 Gm22957-201ENSMUST00000122511 123 ntBASIC3.36□□□□□ -1.87
Pcdh1F7BJK1 Gm23466-201ENSMUST00000157133 106 ntBASIC3.36□□□□□ -1.87
Pcdh1F7BJK1 Gm22320-201ENSMUST00000157149 312 ntBASIC3.36□□□□□ -1.87
Pcdh1F7BJK1 Gm25223-201ENSMUST00000158200 110 ntBASIC3.36□□□□□ -1.87
Pcdh1F7BJK1 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Pcdh1F7BJK1 Gm6660-201ENSMUST00000179149 468 ntBASIC3.36□□□□□ -1.87
Pcdh1F7BJK1 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC3.36□□□□□ -1.87
Pcdh1F7BJK1 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.36□□□□□ -1.87
Pcdh1F7BJK1 Gm28627-201ENSMUST00000186141 453 ntBASIC3.36□□□□□ -1.87
Pcdh1F7BJK1 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC3.36□□□□□ -1.87
Pcdh1F7BJK1 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.36□□□□□ -1.87
Pcdh1F7BJK1 Gm37575-201ENSMUST00000195467 309 ntBASIC3.36□□□□□ -1.87
Pcdh1F7BJK1 Gm44354-201ENSMUST00000196017 143 ntBASIC3.36□□□□□ -1.87
Pcdh1F7BJK1 Gm23370-202ENSMUST00000197008 129 ntBASIC3.36□□□□□ -1.87
Pcdh1F7BJK1 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.36□□□□□ -1.87
Pcdh1F7BJK1 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Pcdh1F7BJK1 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.36□□□□□ -1.87
Pcdh1F7BJK1 Gm26495-201ENSMUST00000083152 137 ntBASIC3.36□□□□□ -1.87
Pcdh1F7BJK1 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 117.7 ms