Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm19118-201ENSMUST00000222554 98 ntBASIC0.31□□□□□ -2.36
Col6a3E9PWQ3 AC165437.1-201ENSMUST00000228640 536 ntBASIC0.31□□□□□ -2.36
Col6a3E9PWQ3 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
Col6a3E9PWQ3 Gm25856-201ENSMUST00000082786 75 ntBASIC0.31□□□□□ -2.36
Col6a3E9PWQ3 Gm24126-201ENSMUST00000104111 106 ntBASIC0.3□□□□□ -2.36
Col6a3E9PWQ3 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC0.3□□□□□ -2.36
Col6a3E9PWQ3 Gm25107-201ENSMUST00000122472 129 ntBASIC0.3□□□□□ -2.36
Col6a3E9PWQ3 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC0.3□□□□□ -2.36
Col6a3E9PWQ3 Gm45316-201ENSMUST00000210128 162 ntBASIC0.3□□□□□ -2.36
Col6a3E9PWQ3 n-R5s153-201ENSMUST00000083451 116 ntBASIC0.3□□□□□ -2.36
Col6a3E9PWQ3 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
Col6a3E9PWQ3 Gm26018-201ENSMUST00000104406 128 ntBASIC0.3□□□□□ -2.36
Col6a3E9PWQ3 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC0.3□□□□□ -2.36
Col6a3E9PWQ3 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC0.3□□□□□ -2.36
Col6a3E9PWQ3 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC0.3□□□□□ -2.36
Col6a3E9PWQ3 Gm10925-201ENSMUST00000189941 678 ntBASIC0.3□□□□□ -2.36
Col6a3E9PWQ3 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
Col6a3E9PWQ3 Gm19237-201ENSMUST00000205036 1132 ntBASIC0.3□□□□□ -2.36
Col6a3E9PWQ3 Gm44286-201ENSMUST00000204098 1487 ntBASIC0.3□□□□□ -2.36
Col6a3E9PWQ3 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC0.3□□□□□ -2.36
Col6a3E9PWQ3 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
Col6a3E9PWQ3 Mir145b-201ENSMUST00000184434 75 ntBASIC0.3□□□□□ -2.36
Col6a3E9PWQ3 Gm37979-201ENSMUST00000193065 712 ntBASIC0.3□□□□□ -2.36
Col6a3E9PWQ3 Gm17987-201ENSMUST00000206902 603 ntBASIC0.3□□□□□ -2.36
Col6a3E9PWQ3 Gm44656-201ENSMUST00000208428 490 ntBASIC0.3□□□□□ -2.36
Col6a3E9PWQ3 Gm24459-201ENSMUST00000082730 86 ntBASIC0.3□□□□□ -2.36
Col6a3E9PWQ3 Gm25318-201ENSMUST00000122554 314 ntBASIC0.29□□□□□ -2.36
Col6a3E9PWQ3 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC0.29□□□□□ -2.36
Col6a3E9PWQ3 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC0.29□□□□□ -2.36
Col6a3E9PWQ3 Gm43228-201ENSMUST00000200735 264 ntBASIC0.29□□□□□ -2.36
Col6a3E9PWQ3 AC158388.1-201ENSMUST00000225441 256 ntBASIC0.29□□□□□ -2.36
Col6a3E9PWQ3 AC154730.1-201ENSMUST00000227874 816 ntBASIC0.29□□□□□ -2.36
Col6a3E9PWQ3 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC0.29□□□□□ -2.36
Col6a3E9PWQ3 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC0.29□□□□□ -2.36
Col6a3E9PWQ3 Gm43199-201ENSMUST00000200019 307 ntBASIC0.29□□□□□ -2.36
Col6a3E9PWQ3 Gm45207-201ENSMUST00000207469 145 ntBASIC0.29□□□□□ -2.36
Col6a3E9PWQ3 AC163289.1-201ENSMUST00000215919 262 ntBASIC0.29□□□□□ -2.36
Col6a3E9PWQ3 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC0.28□□□□□ -2.36
Col6a3E9PWQ3 AC161250.2-201ENSMUST00000215114 3107 ntBASIC0.28□□□□□ -2.36
Col6a3E9PWQ3 Gm22560-201ENSMUST00000157332 120 ntBASIC0.28□□□□□ -2.36
Col6a3E9PWQ3 Gm22013-201ENSMUST00000158788 103 ntBASIC0.28□□□□□ -2.36
Col6a3E9PWQ3 Gm17052-201ENSMUST00000165496 289 ntBASIC0.28□□□□□ -2.36
Col6a3E9PWQ3 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC0.28□□□□□ -2.36
Col6a3E9PWQ3 AC159293.2-201ENSMUST00000222289 424 ntBASIC0.28□□□□□ -2.36
Col6a3E9PWQ3 Gm23455-201ENSMUST00000083331 100 ntBASIC0.28□□□□□ -2.36
Col6a3E9PWQ3 Gm23245-201ENSMUST00000083370 135 ntBASIC0.28□□□□□ -2.36
Col6a3E9PWQ3 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
Col6a3E9PWQ3 Gm11843-201ENSMUST00000118984 425 ntBASIC0.28□□□□□ -2.36
Col6a3E9PWQ3 Gm25544-201ENSMUST00000122676 120 ntBASIC0.28□□□□□ -2.36
Col6a3E9PWQ3 Gm16331-201ENSMUST00000144274 498 ntBASIC0.28□□□□□ -2.36
Col6a3E9PWQ3 Gm20526-201ENSMUST00000173416 158 ntBASIC0.28□□□□□ -2.36
Col6a3E9PWQ3 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC0.28□□□□□ -2.36
Col6a3E9PWQ3 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
Col6a3E9PWQ3 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
Col6a3E9PWQ3 Gm5309-201ENSMUST00000197416 677 ntBASIC0.28□□□□□ -2.36
Col6a3E9PWQ3 Gm45386-201ENSMUST00000210194 218 ntBASIC0.28□□□□□ -2.36
Col6a3E9PWQ3 Gm45288-201ENSMUST00000210236 151 ntBASIC0.28□□□□□ -2.36
Col6a3E9PWQ3 Gm21089-201ENSMUST00000215843 325 ntBASIC0.28□□□□□ -2.36
Col6a3E9PWQ3 AC158392.1-201ENSMUST00000223720 1069 ntBASIC0.28□□□□□ -2.36
Col6a3E9PWQ3 AC116395.1-201ENSMUST00000225480 1143 ntBASIC0.28□□□□□ -2.36
Col6a3E9PWQ3 Gm26128-201ENSMUST00000083170 110 ntBASIC0.28□□□□□ -2.36
Col6a3E9PWQ3 Gm24587-201ENSMUST00000116697 89 ntBASIC0.28□□□□□ -2.37
Col6a3E9PWQ3 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC0.28□□□□□ -2.37
Col6a3E9PWQ3 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC0.28□□□□□ -2.37
Col6a3E9PWQ3 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC0.28□□□□□ -2.37
Col6a3E9PWQ3 AC151907.1-201ENSMUST00000228812 412 ntBASIC0.28□□□□□ -2.37
Col6a3E9PWQ3 Gm23124-201ENSMUST00000157650 107 ntBASIC0.27□□□□□ -2.37
Col6a3E9PWQ3 Mir1967-201ENSMUST00000157789 82 ntBASIC0.27□□□□□ -2.37
Col6a3E9PWQ3 Snord8-201ENSMUST00000175303 110 ntBASIC0.27□□□□□ -2.37
Col6a3E9PWQ3 Gm37213-201ENSMUST00000193077 586 ntBASIC0.27□□□□□ -2.37
Col6a3E9PWQ3 Gm44976-201ENSMUST00000205543 261 ntBASIC0.27□□□□□ -2.37
Col6a3E9PWQ3 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC0.27□□□□□ -2.37
Col6a3E9PWQ3 AC159476.2-201ENSMUST00000216221 418 ntBASIC0.27□□□□□ -2.37
Col6a3E9PWQ3 AC161758.2-201ENSMUST00000228513 218 ntBASIC0.27□□□□□ -2.37
Col6a3E9PWQ3 CT025525.3-201ENSMUST00000228858 366 ntBASIC0.27□□□□□ -2.37
Col6a3E9PWQ3 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
Col6a3E9PWQ3 Mir3964-201ENSMUST00000174898 74 ntBASIC0.27□□□□□ -2.37
Col6a3E9PWQ3 Mir6402-201ENSMUST00000183406 80 ntBASIC0.27□□□□□ -2.37
Col6a3E9PWQ3 Gm12889-201ENSMUST00000118684 241 ntBASIC0.26□□□□□ -2.37
Col6a3E9PWQ3 Gm25429-201ENSMUST00000157607 132 ntBASIC0.26□□□□□ -2.37
Col6a3E9PWQ3 Gm22942-201ENSMUST00000158563 124 ntBASIC0.26□□□□□ -2.37
Col6a3E9PWQ3 Trbv24-201ENSMUST00000194614 347 ntBASIC0.26□□□□□ -2.37
Col6a3E9PWQ3 Gm42672-201ENSMUST00000197821 352 ntBASIC0.26□□□□□ -2.37
Col6a3E9PWQ3 Gm44469-201ENSMUST00000198558 79 ntBASIC0.26□□□□□ -2.37
Col6a3E9PWQ3 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC0.26□□□□□ -2.37
Col6a3E9PWQ3 AC120540.1-201ENSMUST00000221879 324 ntBASIC0.26□□□□□ -2.37
Col6a3E9PWQ3 Gm13672-201ENSMUST00000117554 459 ntBASIC0.26□□□□□ -2.37
Col6a3E9PWQ3 Gm22957-201ENSMUST00000122511 123 ntBASIC0.26□□□□□ -2.37
Col6a3E9PWQ3 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC0.26□□□□□ -2.37
Col6a3E9PWQ3 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
Col6a3E9PWQ3 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
Col6a3E9PWQ3 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
Col6a3E9PWQ3 Gm37000-201ENSMUST00000193058 428 ntBASIC0.26□□□□□ -2.37
Col6a3E9PWQ3 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC0.26□□□□□ -2.37
Col6a3E9PWQ3 Gm23429-201ENSMUST00000122486 149 ntBASIC0.26□□□□□ -2.37
Col6a3E9PWQ3 Gm23601-201ENSMUST00000157259 131 ntBASIC0.26□□□□□ -2.37
Col6a3E9PWQ3 Gm22082-201ENSMUST00000157587 161 ntBASIC0.26□□□□□ -2.37
Col6a3E9PWQ3 Gm28579-201ENSMUST00000186143 369 ntBASIC0.26□□□□□ -2.37
Col6a3E9PWQ3 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC0.26□□□□□ -2.37
Col6a3E9PWQ3 Mir93-201ENSMUST00000083593 88 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms