Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC0.33□□□□□ -2.36
Col6a5A6H584 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
Col6a5A6H584 Gm11857-201ENSMUST00000119817 324 ntBASIC0.32□□□□□ -2.36
Col6a5A6H584 Gm29231-201ENSMUST00000179850 319 ntBASIC0.32□□□□□ -2.36
Col6a5A6H584 Gm27944-201ENSMUST00000185155 103 ntBASIC0.32□□□□□ -2.36
Col6a5A6H584 Gm21147-201ENSMUST00000186046 913 ntBASIC0.32□□□□□ -2.36
Col6a5A6H584 AC153864.2-201ENSMUST00000220424 292 ntBASIC0.32□□□□□ -2.36
Col6a5A6H584 Gm10092-201ENSMUST00000077110 180 ntBASIC0.32□□□□□ -2.36
Col6a5A6H584 Gm23627-201ENSMUST00000082459 107 ntBASIC0.32□□□□□ -2.36
Col6a5A6H584 Gm11404-201ENSMUST00000120872 494 ntBASIC0.32□□□□□ -2.36
Col6a5A6H584 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC0.32□□□□□ -2.36
Col6a5A6H584 Gm2966-201ENSMUST00000166052 481 ntBASIC0.32□□□□□ -2.36
Col6a5A6H584 Gm17204-201ENSMUST00000167936 478 ntBASIC0.32□□□□□ -2.36
Col6a5A6H584 Gm25241-201ENSMUST00000174909 84 ntBASIC0.32□□□□□ -2.36
Col6a5A6H584 Gm25297-201ENSMUST00000175490 67 ntBASIC0.32□□□□□ -2.36
Col6a5A6H584 Gm23419-201ENSMUST00000175523 84 ntBASIC0.32□□□□□ -2.36
Col6a5A6H584 Gm22801-201ENSMUST00000175624 84 ntBASIC0.32□□□□□ -2.36
Col6a5A6H584 Mir7057-201ENSMUST00000184685 58 ntBASIC0.32□□□□□ -2.36
Col6a5A6H584 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC0.32□□□□□ -2.36
Col6a5A6H584 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC0.31□□□□□ -2.36
Col6a5A6H584 Gm37817-201ENSMUST00000195276 434 ntBASIC0.31□□□□□ -2.36
Col6a5A6H584 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC0.31□□□□□ -2.36
Col6a5A6H584 Gm29344-201ENSMUST00000068143 210 ntBASIC0.31□□□□□ -2.36
Col6a5A6H584 Mir351-201ENSMUST00000083569 99 ntBASIC0.31□□□□□ -2.36
Col6a5A6H584 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC0.31□□□□□ -2.36
Col6a5A6H584 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC0.31□□□□□ -2.36
Col6a5A6H584 Gm18358-201ENSMUST00000173179 1277 ntBASIC0.3□□□□□ -2.36
Col6a5A6H584 Mir6342-201ENSMUST00000183870 125 ntBASIC0.3□□□□□ -2.36
Col6a5A6H584 Gm28579-201ENSMUST00000186143 369 ntBASIC0.3□□□□□ -2.36
Col6a5A6H584 Gm43245-201ENSMUST00000197603 468 ntBASIC0.3□□□□□ -2.36
Col6a5A6H584 Gm21089-201ENSMUST00000215843 325 ntBASIC0.3□□□□□ -2.36
Col6a5A6H584 Gm26147-201ENSMUST00000104479 114 ntBASIC0.3□□□□□ -2.36
Col6a5A6H584 Gm15215-201ENSMUST00000117773 489 ntBASIC0.3□□□□□ -2.36
Col6a5A6H584 Gm22382-201ENSMUST00000158185 130 ntBASIC0.3□□□□□ -2.36
Col6a5A6H584 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
Col6a5A6H584 Gm44657-201ENSMUST00000208568 450 ntBASIC0.3□□□□□ -2.36
Col6a5A6H584 Gm22169-201ENSMUST00000083229 107 ntBASIC0.3□□□□□ -2.36
Col6a5A6H584 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC0.29□□□□□ -2.36
Col6a5A6H584 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.29□□□□□ -2.36
Col6a5A6H584 Gm23886-201ENSMUST00000122684 313 ntBASIC0.29□□□□□ -2.36
Col6a5A6H584 Trbv24-201ENSMUST00000194614 347 ntBASIC0.29□□□□□ -2.36
Col6a5A6H584 Gm38274-201ENSMUST00000195689 148 ntBASIC0.29□□□□□ -2.36
Col6a5A6H584 Gm42625-201ENSMUST00000198611 922 ntBASIC0.29□□□□□ -2.36
Col6a5A6H584 AC159709.1-201ENSMUST00000220445 349 ntBASIC0.29□□□□□ -2.36
Col6a5A6H584 AC162857.1-201ENSMUST00000226614 400 ntBASIC0.29□□□□□ -2.36
Col6a5A6H584 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
Col6a5A6H584 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC0.29□□□□□ -2.36
Col6a5A6H584 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.29□□□□□ -2.36
Col6a5A6H584 Gm22477-201ENSMUST00000122569 316 ntBASIC0.29□□□□□ -2.36
Col6a5A6H584 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC0.29□□□□□ -2.36
Col6a5A6H584 Gm25198-201ENSMUST00000178574 110 ntBASIC0.29□□□□□ -2.36
Col6a5A6H584 Gm29647-201ENSMUST00000188795 666 ntBASIC0.29□□□□□ -2.36
Col6a5A6H584 Gm28504-201ENSMUST00000190977 666 ntBASIC0.29□□□□□ -2.36
Col6a5A6H584 Gm37029-201ENSMUST00000195773 239 ntBASIC0.29□□□□□ -2.36
Col6a5A6H584 Gm43529-201ENSMUST00000199178 412 ntBASIC0.29□□□□□ -2.36
Col6a5A6H584 Gm43371-201ENSMUST00000202838 1031 ntBASIC0.29□□□□□ -2.36
Col6a5A6H584 Gm44803-201ENSMUST00000204384 156 ntBASIC0.29□□□□□ -2.36
Col6a5A6H584 AC079644.1-201ENSMUST00000220586 405 ntBASIC0.29□□□□□ -2.36
Col6a5A6H584 AC127371.3-201ENSMUST00000228129 415 ntBASIC0.29□□□□□ -2.36
Col6a5A6H584 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
Col6a5A6H584 Gm44286-201ENSMUST00000204098 1487 ntBASIC0.29□□□□□ -2.36
Col6a5A6H584 Gm22658-201ENSMUST00000104196 155 ntBASIC0.28□□□□□ -2.36
Col6a5A6H584 Gm26186-201ENSMUST00000157689 125 ntBASIC0.28□□□□□ -2.36
Col6a5A6H584 Gm22663-201ENSMUST00000158721 102 ntBASIC0.28□□□□□ -2.36
Col6a5A6H584 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC0.28□□□□□ -2.36
Col6a5A6H584 AC091260.1-201ENSMUST00000216112 229 ntBASIC0.28□□□□□ -2.36
Col6a5A6H584 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
Col6a5A6H584 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
Col6a5A6H584 Gm9001-201ENSMUST00000121642 399 ntBASIC0.28□□□□□ -2.37
Col6a5A6H584 Gm43541-201ENSMUST00000197208 581 ntBASIC0.28□□□□□ -2.37
Col6a5A6H584 Gm44465-201ENSMUST00000199536 114 ntBASIC0.28□□□□□ -2.37
Col6a5A6H584 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.28□□□□□ -2.37
Col6a5A6H584 AC116395.1-201ENSMUST00000225480 1143 ntBASIC0.28□□□□□ -2.37
Col6a5A6H584 Gm23969-201ENSMUST00000083324 74 ntBASIC0.28□□□□□ -2.37
Col6a5A6H584 Mir103-1-201ENSMUST00000083619 86 ntBASIC0.28□□□□□ -2.37
Col6a5A6H584 Mir466i-201ENSMUST00000116924 121 ntBASIC0.27□□□□□ -2.37
Col6a5A6H584 Gm24385-201ENSMUST00000122694 350 ntBASIC0.27□□□□□ -2.37
Col6a5A6H584 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
Col6a5A6H584 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
Col6a5A6H584 AC154636.3-201ENSMUST00000221489 1214 ntBASIC0.27□□□□□ -2.37
Col6a5A6H584 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC0.27□□□□□ -2.37
Col6a5A6H584 Gm23245-201ENSMUST00000083370 135 ntBASIC0.27□□□□□ -2.37
Col6a5A6H584 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
Col6a5A6H584 Gm12155-201ENSMUST00000121267 160 ntBASIC0.27□□□□□ -2.37
Col6a5A6H584 Gm14364-201ENSMUST00000129209 267 ntBASIC0.27□□□□□ -2.37
Col6a5A6H584 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
Col6a5A6H584 Gm44954-201ENSMUST00000208513 227 ntBASIC0.27□□□□□ -2.37
Col6a5A6H584 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
Col6a5A6H584 Mir672-201ENSMUST00000102331 100 ntBASIC0.26□□□□□ -2.37
Col6a5A6H584 Gm22233-201ENSMUST00000157464 114 ntBASIC0.26□□□□□ -2.37
Col6a5A6H584 Gm23124-201ENSMUST00000157650 107 ntBASIC0.26□□□□□ -2.37
Col6a5A6H584 Gm25868-201ENSMUST00000158253 114 ntBASIC0.26□□□□□ -2.37
Col6a5A6H584 Gm25936-201ENSMUST00000179952 114 ntBASIC0.26□□□□□ -2.37
Col6a5A6H584 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC0.26□□□□□ -2.37
Col6a5A6H584 Gm44058-201ENSMUST00000204335 467 ntBASIC0.26□□□□□ -2.37
Col6a5A6H584 Gm44910-201ENSMUST00000208451 396 ntBASIC0.26□□□□□ -2.37
Col6a5A6H584 CT030166.2-201ENSMUST00000222021 368 ntBASIC0.26□□□□□ -2.37
Col6a5A6H584 Gm25794-201ENSMUST00000083286 107 ntBASIC0.26□□□□□ -2.37
Col6a5A6H584 Mir301-201ENSMUST00000083655 86 ntBASIC0.26□□□□□ -2.37
Col6a5A6H584 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC0.26□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms