Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Mir3569-201ENSMUST00000185080 58 ntBASIC0.67□□□□□ -2.3
Trav12-1A0N8R1 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC0.67□□□□□ -2.3
Trav12-1A0N8R1 Gm37002-201ENSMUST00000194560 373 ntBASIC0.67□□□□□ -2.3
Trav12-1A0N8R1 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC0.67□□□□□ -2.3
Trav12-1A0N8R1 Mir6962-201ENSMUST00000199512 63 ntBASIC0.67□□□□□ -2.3
Trav12-1A0N8R1 Gm43531-201ENSMUST00000200676 1114 ntBASIC0.67□□□□□ -2.3
Trav12-1A0N8R1 Gm44910-201ENSMUST00000208451 396 ntBASIC0.67□□□□□ -2.3
Trav12-1A0N8R1 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
Trav12-1A0N8R1 Gm22544-201ENSMUST00000104349 127 ntBASIC0.66□□□□□ -2.3
Trav12-1A0N8R1 Gm11065-201ENSMUST00000111462 228 ntBASIC0.66□□□□□ -2.3
Trav12-1A0N8R1 Gm15659-201ENSMUST00000118881 341 ntBASIC0.66□□□□□ -2.3
Trav12-1A0N8R1 Gm23893-201ENSMUST00000158106 134 ntBASIC0.66□□□□□ -2.3
Trav12-1A0N8R1 Gm24942-201ENSMUST00000158328 114 ntBASIC0.66□□□□□ -2.3
Trav12-1A0N8R1 Gm22164-201ENSMUST00000158413 106 ntBASIC0.66□□□□□ -2.3
Trav12-1A0N8R1 Gm22075-201ENSMUST00000158599 192 ntBASIC0.66□□□□□ -2.3
Trav12-1A0N8R1 Gm3025-201ENSMUST00000163454 489 ntBASIC0.66□□□□□ -2.3
Trav12-1A0N8R1 Gm3111-201ENSMUST00000167426 490 ntBASIC0.66□□□□□ -2.3
Trav12-1A0N8R1 Gm22693-201ENSMUST00000175049 442 ntBASIC0.66□□□□□ -2.3
Trav12-1A0N8R1 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
Trav12-1A0N8R1 Gm27028-201ENSMUST00000182303 399 ntBASIC0.66□□□□□ -2.3
Trav12-1A0N8R1 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC0.66□□□□□ -2.3
Trav12-1A0N8R1 Gm38323-201ENSMUST00000192450 210 ntBASIC0.66□□□□□ -2.3
Trav12-1A0N8R1 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC0.66□□□□□ -2.3
Trav12-1A0N8R1 Gm42834-201ENSMUST00000196845 256 ntBASIC0.66□□□□□ -2.3
Trav12-1A0N8R1 Gm9402-201ENSMUST00000196849 388 ntBASIC0.66□□□□□ -2.3
Trav12-1A0N8R1 Gm17937-201ENSMUST00000197908 742 ntBASIC0.66□□□□□ -2.3
Trav12-1A0N8R1 AC188459.1-201ENSMUST00000216651 300 ntBASIC0.66□□□□□ -2.3
Trav12-1A0N8R1 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC0.66□□□□□ -2.3
Trav12-1A0N8R1 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
Trav12-1A0N8R1 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
Trav12-1A0N8R1 Gm14657-201ENSMUST00000117461 302 ntBASIC0.65□□□□□ -2.31
Trav12-1A0N8R1 Gm14128-201ENSMUST00000119514 1011 ntBASIC0.65□□□□□ -2.31
Trav12-1A0N8R1 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
Trav12-1A0N8R1 Gm25220-201ENSMUST00000157546 95 ntBASIC0.65□□□□□ -2.31
Trav12-1A0N8R1 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC0.65□□□□□ -2.31
Trav12-1A0N8R1 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
Trav12-1A0N8R1 Gm21744-201ENSMUST00000178403 662 ntBASIC0.65□□□□□ -2.31
Trav12-1A0N8R1 Gm29413-201ENSMUST00000186019 880 ntBASIC0.65□□□□□ -2.31
Trav12-1A0N8R1 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
Trav12-1A0N8R1 Gm28700-201ENSMUST00000187614 579 ntBASIC0.65□□□□□ -2.31
Trav12-1A0N8R1 Gm18357-201ENSMUST00000188184 580 ntBASIC0.65□□□□□ -2.31
Trav12-1A0N8R1 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
Trav12-1A0N8R1 Gm29639-201ENSMUST00000188375 580 ntBASIC0.65□□□□□ -2.31
Trav12-1A0N8R1 Gm28843-201ENSMUST00000189198 678 ntBASIC0.65□□□□□ -2.31
Trav12-1A0N8R1 Gm29546-201ENSMUST00000191171 678 ntBASIC0.65□□□□□ -2.31
Trav12-1A0N8R1 Gm44320-201ENSMUST00000199276 86 ntBASIC0.65□□□□□ -2.31
Trav12-1A0N8R1 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC0.65□□□□□ -2.31
Trav12-1A0N8R1 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC0.65□□□□□ -2.31
Trav12-1A0N8R1 Gm23735-201ENSMUST00000082551 134 ntBASIC0.65□□□□□ -2.31
Trav12-1A0N8R1 Gm25128-201ENSMUST00000083339 76 ntBASIC0.65□□□□□ -2.31
Trav12-1A0N8R1 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC0.65□□□□□ -2.31
Trav12-1A0N8R1 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
Trav12-1A0N8R1 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
Trav12-1A0N8R1 Gm22091-201ENSMUST00000116908 127 ntBASIC0.64□□□□□ -2.31
Trav12-1A0N8R1 Gm5396-201ENSMUST00000121222 532 ntBASIC0.64□□□□□ -2.31
Trav12-1A0N8R1 Snrpert-201ENSMUST00000121967 279 ntBASIC0.64□□□□□ -2.31
Trav12-1A0N8R1 Gm23983-201ENSMUST00000157142 114 ntBASIC0.64□□□□□ -2.31
Trav12-1A0N8R1 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC0.64□□□□□ -2.31
Trav12-1A0N8R1 Mir6419-201ENSMUST00000184784 113 ntBASIC0.64□□□□□ -2.31
Trav12-1A0N8R1 Gm19885-201ENSMUST00000212853 343 ntBASIC0.64□□□□□ -2.31
Trav12-1A0N8R1 Gm46994-201ENSMUST00000221523 219 ntBASIC0.64□□□□□ -2.31
Trav12-1A0N8R1 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
Trav12-1A0N8R1 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC0.64□□□□□ -2.31
Trav12-1A0N8R1 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
Trav12-1A0N8R1 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
Trav12-1A0N8R1 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
Trav12-1A0N8R1 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
Trav12-1A0N8R1 Gm14915-201ENSMUST00000120747 204 ntBASIC0.63□□□□□ -2.31
Trav12-1A0N8R1 Gm15861-201ENSMUST00000120979 339 ntBASIC0.63□□□□□ -2.31
Trav12-1A0N8R1 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC0.63□□□□□ -2.31
Trav12-1A0N8R1 Atp2b4-208ENSMUST00000167348 243 ntBASIC0.63□□□□□ -2.31
Trav12-1A0N8R1 Gm6660-201ENSMUST00000179149 468 ntBASIC0.63□□□□□ -2.31
Trav12-1A0N8R1 Gm27660-201ENSMUST00000184028 208 ntBASIC0.63□□□□□ -2.31
Trav12-1A0N8R1 AC126267.1-201ENSMUST00000214282 284 ntBASIC0.63□□□□□ -2.31
Trav12-1A0N8R1 AC159476.2-201ENSMUST00000216221 418 ntBASIC0.63□□□□□ -2.31
Trav12-1A0N8R1 AC160863.1-201ENSMUST00000218412 317 ntBASIC0.63□□□□□ -2.31
Trav12-1A0N8R1 AC154521.1-201ENSMUST00000222635 330 ntBASIC0.63□□□□□ -2.31
Trav12-1A0N8R1 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC0.63□□□□□ -2.31
Trav12-1A0N8R1 AC166830.2-201ENSMUST00000225821 196 ntBASIC0.63□□□□□ -2.31
Trav12-1A0N8R1 AC135292.1-201ENSMUST00000227665 204 ntBASIC0.63□□□□□ -2.31
Trav12-1A0N8R1 AC163646.2-201ENSMUST00000227962 141 ntBASIC0.63□□□□□ -2.31
Trav12-1A0N8R1 Gm26265-201ENSMUST00000083277 135 ntBASIC0.63□□□□□ -2.31
Trav12-1A0N8R1 Mir27b-201ENSMUST00000083541 73 ntBASIC0.63□□□□□ -2.31
Trav12-1A0N8R1 Snord35a-201ENSMUST00000083884 90 ntBASIC0.63□□□□□ -2.31
Trav12-1A0N8R1 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
Trav12-1A0N8R1 Gm42721-201ENSMUST00000197165 1523 ntBASIC0.63□□□□□ -2.31
Trav12-1A0N8R1 AC134917.1-201ENSMUST00000220517 1449 ntBASIC0.63□□□□□ -2.31
Trav12-1A0N8R1 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.62□□□□□ -2.31
Trav12-1A0N8R1 Gm24079-201ENSMUST00000104352 132 ntBASIC0.62□□□□□ -2.31
Trav12-1A0N8R1 Gm14554-201ENSMUST00000119548 661 ntBASIC0.62□□□□□ -2.31
Trav12-1A0N8R1 Gm22731-201ENSMUST00000158086 94 ntBASIC0.62□□□□□ -2.31
Trav12-1A0N8R1 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.62□□□□□ -2.31
Trav12-1A0N8R1 Gm20386-201ENSMUST00000174010 132 ntBASIC0.62□□□□□ -2.31
Trav12-1A0N8R1 Gm20630-201ENSMUST00000177387 551 ntBASIC0.62□□□□□ -2.31
Trav12-1A0N8R1 Gm27271-201ENSMUST00000183509 170 ntBASIC0.62□□□□□ -2.31
Trav12-1A0N8R1 Mir6388-201ENSMUST00000184417 75 ntBASIC0.62□□□□□ -2.31
Trav12-1A0N8R1 Mir7665-201ENSMUST00000184907 63 ntBASIC0.62□□□□□ -2.31
Trav12-1A0N8R1 Gm38113-201ENSMUST00000193704 201 ntBASIC0.62□□□□□ -2.31
Trav12-1A0N8R1 Gm37102-201ENSMUST00000195740 1105 ntBASIC0.62□□□□□ -2.31
Trav12-1A0N8R1 Mir3087-201ENSMUST00000199405 56 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 323.1 ms