Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 CT009696.1-201ENSMUST00000215745 256 ntBASIC0.21□□□□□ -2.38
Trav4-3A0A0B4J1K1 AC134335.1-201ENSMUST00000227626 329 ntBASIC0.21□□□□□ -2.38
Trav4-3A0A0B4J1K1 CT025525.3-201ENSMUST00000228858 366 ntBASIC0.21□□□□□ -2.38
Trav4-3A0A0B4J1K1 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
Trav4-3A0A0B4J1K1 Snord32a-201ENSMUST00000083285 83 ntBASIC0.21□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm14797-201ENSMUST00000119378 1480 ntBASIC0.21□□□□□ -2.38
Trav4-3A0A0B4J1K1 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
Trav4-3A0A0B4J1K1 Mir544-201ENSMUST00000103813 78 ntBASIC0.2□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm25485-201ENSMUST00000104120 132 ntBASIC0.2□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm25421-201ENSMUST00000104218 164 ntBASIC0.2□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm23203-201ENSMUST00000104374 107 ntBASIC0.2□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm14884-201ENSMUST00000120456 196 ntBASIC0.2□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm24419-201ENSMUST00000157875 332 ntBASIC0.2□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm24846-201ENSMUST00000158033 108 ntBASIC0.2□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm22522-201ENSMUST00000158271 151 ntBASIC0.2□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm25715-201ENSMUST00000158627 125 ntBASIC0.2□□□□□ -2.38
Trav4-3A0A0B4J1K1 Snora24-201ENSMUST00000174989 130 ntBASIC0.2□□□□□ -2.38
Trav4-3A0A0B4J1K1 Mir3103-201ENSMUST00000175474 67 ntBASIC0.2□□□□□ -2.38
Trav4-3A0A0B4J1K1 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.2□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC0.2□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm28995-201ENSMUST00000186625 261 ntBASIC0.2□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm28200-201ENSMUST00000187778 315 ntBASIC0.2□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm29378-201ENSMUST00000188723 315 ntBASIC0.2□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm28909-201ENSMUST00000189406 315 ntBASIC0.2□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm42924-201ENSMUST00000197261 185 ntBASIC0.2□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm44050-201ENSMUST00000204263 527 ntBASIC0.2□□□□□ -2.38
Trav4-3A0A0B4J1K1 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC0.2□□□□□ -2.38
Trav4-3A0A0B4J1K1 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
Trav4-3A0A0B4J1K1 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC0.2□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm22443-201ENSMUST00000082890 107 ntBASIC0.2□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm24282-201ENSMUST00000104232 66 ntBASIC0.19□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm25506-201ENSMUST00000104339 70 ntBASIC0.19□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm12449-201ENSMUST00000117572 234 ntBASIC0.19□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm11384-201ENSMUST00000121376 303 ntBASIC0.19□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm14530-201ENSMUST00000122391 333 ntBASIC0.19□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm21744-201ENSMUST00000178403 662 ntBASIC0.19□□□□□ -2.38
Trav4-3A0A0B4J1K1 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC0.19□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm29413-201ENSMUST00000186019 880 ntBASIC0.19□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm29134-201ENSMUST00000186579 126 ntBASIC0.19□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC0.19□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm29639-201ENSMUST00000188375 580 ntBASIC0.19□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm29647-201ENSMUST00000188795 666 ntBASIC0.19□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm28337-201ENSMUST00000190425 666 ntBASIC0.19□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm28504-201ENSMUST00000190977 666 ntBASIC0.19□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm31123-201ENSMUST00000192094 666 ntBASIC0.19□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC0.19□□□□□ -2.38
Trav4-3A0A0B4J1K1 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC0.19□□□□□ -2.38
Trav4-3A0A0B4J1K1 AC168062.2-201ENSMUST00000228907 422 ntBASIC0.19□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC0.19□□□□□ -2.38
Trav4-3A0A0B4J1K1 Mir325-201ENSMUST00000083491 98 ntBASIC0.19□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm26175-201ENSMUST00000083794 131 ntBASIC0.19□□□□□ -2.38
Trav4-3A0A0B4J1K1 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.18□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm13343-201ENSMUST00000116474 105 ntBASIC0.18□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm13457-201ENSMUST00000117885 267 ntBASIC0.18□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm14554-201ENSMUST00000119548 661 ntBASIC0.18□□□□□ -2.38
Trav4-3A0A0B4J1K1 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm22551-201ENSMUST00000157795 103 ntBASIC0.18□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm25166-201ENSMUST00000158909 111 ntBASIC0.18□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm24323-201ENSMUST00000175342 77 ntBASIC0.18□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm26116-201ENSMUST00000175600 77 ntBASIC0.18□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm22252-201ENSMUST00000179316 79 ntBASIC0.18□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC0.18□□□□□ -2.38
Trav4-3A0A0B4J1K1 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC0.18□□□□□ -2.38
Trav4-3A0A0B4J1K1 Mir7665-201ENSMUST00000184907 63 ntBASIC0.18□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm28825-201ENSMUST00000186233 238 ntBASIC0.18□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm28862-201ENSMUST00000188246 163 ntBASIC0.18□□□□□ -2.38
Trav4-3A0A0B4J1K1 Mir3961-201ENSMUST00000198795 59 ntBASIC0.18□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm44446-201ENSMUST00000204864 255 ntBASIC0.18□□□□□ -2.38
Trav4-3A0A0B4J1K1 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC0.18□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm19326-201ENSMUST00000219818 326 ntBASIC0.18□□□□□ -2.38
Trav4-3A0A0B4J1K1 AC129202.1-201ENSMUST00000224895 526 ntBASIC0.18□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm11351-202ENSMUST00000225724 478 ntBASIC0.18□□□□□ -2.38
Trav4-3A0A0B4J1K1 AC163646.2-201ENSMUST00000227962 141 ntBASIC0.18□□□□□ -2.38
Trav4-3A0A0B4J1K1 AC133076.1-201ENSMUST00000228074 484 ntBASIC0.18□□□□□ -2.38
Trav4-3A0A0B4J1K1 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
Trav4-3A0A0B4J1K1 Mir196b-201ENSMUST00000083509 85 ntBASIC0.18□□□□□ -2.38
Trav4-3A0A0B4J1K1 Snord33-201ENSMUST00000083694 84 ntBASIC0.18□□□□□ -2.38
Trav4-3A0A0B4J1K1 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC0.18□□□□□ -2.38
Trav4-3A0A0B4J1K1 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.18□□□□□ -2.38
Trav4-3A0A0B4J1K1 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC0.18□□□□□ -2.38
Trav4-3A0A0B4J1K1 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC0.17□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
Trav4-3A0A0B4J1K1 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
Trav4-3A0A0B4J1K1 Mir467h-201ENSMUST00000116759 121 ntBASIC0.17□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm26303-201ENSMUST00000116845 119 ntBASIC0.17□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm14558-201ENSMUST00000117458 381 ntBASIC0.17□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm12656-201ENSMUST00000118149 577 ntBASIC0.17□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC0.17□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC0.17□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm26102-201ENSMUST00000157251 284 ntBASIC0.17□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm26484-201ENSMUST00000158018 106 ntBASIC0.17□□□□□ -2.38
Trav4-3A0A0B4J1K1 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC0.17□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm2878-201ENSMUST00000170173 486 ntBASIC0.17□□□□□ -2.38
Trav4-3A0A0B4J1K1 Mir3968-201ENSMUST00000175355 100 ntBASIC0.17□□□□□ -2.38
Trav4-3A0A0B4J1K1 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC0.17□□□□□ -2.38
Trav4-3A0A0B4J1K1 Mir7663-201ENSMUST00000183950 61 ntBASIC0.17□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm28912-201ENSMUST00000189001 234 ntBASIC0.17□□□□□ -2.38
Trav4-3A0A0B4J1K1 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC0.17□□□□□ -2.38
Trav4-3A0A0B4J1K1 Gm17987-201ENSMUST00000206902 603 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms