Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Gm27878-201ENSMUST00000184000 106 ntBASIC1.58□□□□□ -2.16
Trav16A0A075B653 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.58□□□□□ -2.16
Trav16A0A075B653 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC1.58□□□□□ -2.16
Trav16A0A075B653 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC1.58□□□□□ -2.16
Trav16A0A075B653 Gm45366-201ENSMUST00000209828 384 ntBASIC1.58□□□□□ -2.16
Trav16A0A075B653 AC102352.1-201ENSMUST00000224187 582 ntBASIC1.58□□□□□ -2.16
Trav16A0A075B653 Mir107-201ENSMUST00000083660 87 ntBASIC1.58□□□□□ -2.16
Trav16A0A075B653 Snord38a-201ENSMUST00000083746 71 ntBASIC1.58□□□□□ -2.16
Trav16A0A075B653 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.58□□□□□ -2.16
Trav16A0A075B653 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Trav16A0A075B653 Gm23803-201ENSMUST00000104610 132 ntBASIC1.57□□□□□ -2.16
Trav16A0A075B653 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC1.57□□□□□ -2.16
Trav16A0A075B653 Gm25113-201ENSMUST00000157185 143 ntBASIC1.57□□□□□ -2.16
Trav16A0A075B653 Gm22257-201ENSMUST00000158687 301 ntBASIC1.57□□□□□ -2.16
Trav16A0A075B653 Gm24573-201ENSMUST00000175499 112 ntBASIC1.57□□□□□ -2.16
Trav16A0A075B653 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.57□□□□□ -2.16
Trav16A0A075B653 Mir7016-201ENSMUST00000184308 72 ntBASIC1.57□□□□□ -2.16
Trav16A0A075B653 Mir6950-201ENSMUST00000184438 73 ntBASIC1.57□□□□□ -2.16
Trav16A0A075B653 Mir7028-201ENSMUST00000185016 64 ntBASIC1.57□□□□□ -2.16
Trav16A0A075B653 Gm29452-201ENSMUST00000187996 313 ntBASIC1.57□□□□□ -2.16
Trav16A0A075B653 Gm28860-201ENSMUST00000188103 313 ntBASIC1.57□□□□□ -2.16
Trav16A0A075B653 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC1.57□□□□□ -2.16
Trav16A0A075B653 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC1.57□□□□□ -2.16
Trav16A0A075B653 Gm45071-201ENSMUST00000205353 571 ntBASIC1.57□□□□□ -2.16
Trav16A0A075B653 Gm44830-201ENSMUST00000207667 584 ntBASIC1.57□□□□□ -2.16
Trav16A0A075B653 Gm44910-201ENSMUST00000208451 396 ntBASIC1.57□□□□□ -2.16
Trav16A0A075B653 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Trav16A0A075B653 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC1.57□□□□□ -2.16
Trav16A0A075B653 AC147240.1-201ENSMUST00000218767 431 ntBASIC1.57□□□□□ -2.16
Trav16A0A075B653 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.57□□□□□ -2.16
Trav16A0A075B653 AC124569.4-201ENSMUST00000223830 1220 ntBASIC1.57□□□□□ -2.16
Trav16A0A075B653 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.57□□□□□ -2.16
Trav16A0A075B653 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Trav16A0A075B653 Gm24412-201ENSMUST00000083426 109 ntBASIC1.57□□□□□ -2.16
Trav16A0A075B653 Mir29b-2-201ENSMUST00000083478 81 ntBASIC1.57□□□□□ -2.16
Trav16A0A075B653 Snora33-201ENSMUST00000093556 129 ntBASIC1.57□□□□□ -2.16
Trav16A0A075B653 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Trav16A0A075B653 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Trav16A0A075B653 Gm42801-201ENSMUST00000202562 2865 ntBASIC1.57□□□□□ -2.16
Trav16A0A075B653 Gm12053-201ENSMUST00000119022 252 ntBASIC1.56□□□□□ -2.16
Trav16A0A075B653 Gm11786-201ENSMUST00000120799 155 ntBASIC1.56□□□□□ -2.16
Trav16A0A075B653 Gm11363-201ENSMUST00000121672 548 ntBASIC1.56□□□□□ -2.16
Trav16A0A075B653 Gm14402-201ENSMUST00000122217 508 ntBASIC1.56□□□□□ -2.16
Trav16A0A075B653 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.56□□□□□ -2.16
Trav16A0A075B653 Gm22277-201ENSMUST00000157204 277 ntBASIC1.56□□□□□ -2.16
Trav16A0A075B653 Gm22792-201ENSMUST00000157225 133 ntBASIC1.56□□□□□ -2.16
Trav16A0A075B653 Gm25012-201ENSMUST00000158396 164 ntBASIC1.56□□□□□ -2.16
Trav16A0A075B653 Gm24922-201ENSMUST00000158511 102 ntBASIC1.56□□□□□ -2.16
Trav16A0A075B653 Gm23342-201ENSMUST00000158958 115 ntBASIC1.56□□□□□ -2.16
Trav16A0A075B653 Gm24418-201ENSMUST00000177597 79 ntBASIC1.56□□□□□ -2.16
Trav16A0A075B653 Gm24639-201ENSMUST00000178518 79 ntBASIC1.56□□□□□ -2.16
Trav16A0A075B653 Gm23076-201ENSMUST00000179082 79 ntBASIC1.56□□□□□ -2.16
Trav16A0A075B653 Gm25077-201ENSMUST00000179157 79 ntBASIC1.56□□□□□ -2.16
Trav16A0A075B653 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
Trav16A0A075B653 Gm27249-201ENSMUST00000185049 328 ntBASIC1.56□□□□□ -2.16
Trav16A0A075B653 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
Trav16A0A075B653 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Trav16A0A075B653 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.56□□□□□ -2.16
Trav16A0A075B653 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Trav16A0A075B653 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC1.56□□□□□ -2.16
Trav16A0A075B653 Snord43-201ENSMUST00000199549 108 ntBASIC1.56□□□□□ -2.16
Trav16A0A075B653 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC1.56□□□□□ -2.16
Trav16A0A075B653 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
Trav16A0A075B653 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Trav16A0A075B653 Gm22062-201ENSMUST00000082563 107 ntBASIC1.56□□□□□ -2.16
Trav16A0A075B653 Gm22978-201ENSMUST00000082607 160 ntBASIC1.56□□□□□ -2.16
Trav16A0A075B653 Gm42664-201ENSMUST00000199417 3239 ntBASIC1.56□□□□□ -2.16
Trav16A0A075B653 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC1.56□□□□□ -2.16
Trav16A0A075B653 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
Trav16A0A075B653 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Trav16A0A075B653 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.55□□□□□ -2.16
Trav16A0A075B653 Gm16021-201ENSMUST00000121176 219 ntBASIC1.55□□□□□ -2.16
Trav16A0A075B653 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.55□□□□□ -2.16
Trav16A0A075B653 Gm16218-201ENSMUST00000155424 388 ntBASIC1.55□□□□□ -2.16
Trav16A0A075B653 Gm23000-201ENSMUST00000157083 139 ntBASIC1.55□□□□□ -2.16
Trav16A0A075B653 Gm24237-201ENSMUST00000157790 132 ntBASIC1.55□□□□□ -2.16
Trav16A0A075B653 Gm24388-201ENSMUST00000177872 107 ntBASIC1.55□□□□□ -2.16
Trav16A0A075B653 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Trav16A0A075B653 Gm27722-201ENSMUST00000183908 76 ntBASIC1.55□□□□□ -2.16
Trav16A0A075B653 Mir6975-201ENSMUST00000184879 61 ntBASIC1.55□□□□□ -2.16
Trav16A0A075B653 Gm29640-201ENSMUST00000187972 278 ntBASIC1.55□□□□□ -2.16
Trav16A0A075B653 Gm37869-201ENSMUST00000193385 595 ntBASIC1.55□□□□□ -2.16
Trav16A0A075B653 Mir6925-201ENSMUST00000197857 70 ntBASIC1.55□□□□□ -2.16
Trav16A0A075B653 Gm44870-201ENSMUST00000207291 357 ntBASIC1.55□□□□□ -2.16
Trav16A0A075B653 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC1.55□□□□□ -2.16
Trav16A0A075B653 Gm17990-201ENSMUST00000211728 553 ntBASIC1.55□□□□□ -2.16
Trav16A0A075B653 AC157017.1-201ENSMUST00000220148 364 ntBASIC1.55□□□□□ -2.16
Trav16A0A075B653 CT571268.1-201ENSMUST00000222320 407 ntBASIC1.55□□□□□ -2.16
Trav16A0A075B653 AC132918.1-201ENSMUST00000227877 925 ntBASIC1.55□□□□□ -2.16
Trav16A0A075B653 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Trav16A0A075B653 Gm26126-201ENSMUST00000083188 164 ntBASIC1.55□□□□□ -2.16
Trav16A0A075B653 Gm25124-201ENSMUST00000083345 164 ntBASIC1.55□□□□□ -2.16
Trav16A0A075B653 Gm23093-201ENSMUST00000083450 102 ntBASIC1.55□□□□□ -2.16
Trav16A0A075B653 Mir151-201ENSMUST00000083678 68 ntBASIC1.55□□□□□ -2.16
Trav16A0A075B653 Gm42942-201ENSMUST00000196086 1328 ntBASIC1.55□□□□□ -2.16
Trav16A0A075B653 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC1.54□□□□□ -2.16
Trav16A0A075B653 Gm23472-201ENSMUST00000101806 191 ntBASIC1.54□□□□□ -2.16
Trav16A0A075B653 Gm11935-201ENSMUST00000118608 399 ntBASIC1.54□□□□□ -2.16
Trav16A0A075B653 Gm12793-201ENSMUST00000119268 292 ntBASIC1.54□□□□□ -2.16
Trav16A0A075B653 Gm25102-201ENSMUST00000122479 112 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 170.5 ms