Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm18729-201ENSMUST00000217230 621 ntBASIC0.63□□□□□ -2.31
Trav8-1A0A075B641 Gm18774-201ENSMUST00000218269 601 ntBASIC0.63□□□□□ -2.31
Trav8-1A0A075B641 Gm3333-202ENSMUST00000221763 1044 ntBASIC0.63□□□□□ -2.31
Trav8-1A0A075B641 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC0.63□□□□□ -2.31
Trav8-1A0A075B641 AC147633.1-201ENSMUST00000225134 259 ntBASIC0.63□□□□□ -2.31
Trav8-1A0A075B641 CT030238.4-201ENSMUST00000228579 801 ntBASIC0.63□□□□□ -2.31
Trav8-1A0A075B641 Gm22299-201ENSMUST00000082663 136 ntBASIC0.63□□□□□ -2.31
Trav8-1A0A075B641 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC0.62□□□□□ -2.31
Trav8-1A0A075B641 Gm25485-201ENSMUST00000104120 132 ntBASIC0.62□□□□□ -2.31
Trav8-1A0A075B641 Gm24079-201ENSMUST00000104352 132 ntBASIC0.62□□□□□ -2.31
Trav8-1A0A075B641 Gm13087-201ENSMUST00000118298 256 ntBASIC0.62□□□□□ -2.31
Trav8-1A0A075B641 Gm14215-201ENSMUST00000120578 221 ntBASIC0.62□□□□□ -2.31
Trav8-1A0A075B641 Gm11606-201ENSMUST00000120706 617 ntBASIC0.62□□□□□ -2.31
Trav8-1A0A075B641 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC0.62□□□□□ -2.31
Trav8-1A0A075B641 Gm23752-201ENSMUST00000157584 115 ntBASIC0.62□□□□□ -2.31
Trav8-1A0A075B641 Gm24076-201ENSMUST00000158179 94 ntBASIC0.62□□□□□ -2.31
Trav8-1A0A075B641 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
Trav8-1A0A075B641 Gm22716-201ENSMUST00000177596 107 ntBASIC0.62□□□□□ -2.31
Trav8-1A0A075B641 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC0.62□□□□□ -2.31
Trav8-1A0A075B641 Gm38154-201ENSMUST00000195444 340 ntBASIC0.62□□□□□ -2.31
Trav8-1A0A075B641 Gm44324-201ENSMUST00000198517 135 ntBASIC0.62□□□□□ -2.31
Trav8-1A0A075B641 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC0.62□□□□□ -2.31
Trav8-1A0A075B641 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC0.62□□□□□ -2.31
Trav8-1A0A075B641 Gm19649-201ENSMUST00000201126 822 ntBASIC0.62□□□□□ -2.31
Trav8-1A0A075B641 Gm44232-201ENSMUST00000204537 225 ntBASIC0.62□□□□□ -2.31
Trav8-1A0A075B641 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC0.62□□□□□ -2.31
Trav8-1A0A075B641 AC116726.2-201ENSMUST00000217629 986 ntBASIC0.62□□□□□ -2.31
Trav8-1A0A075B641 AC122242.1-201ENSMUST00000224650 304 ntBASIC0.62□□□□□ -2.31
Trav8-1A0A075B641 Mir429-201ENSMUST00000083493 83 ntBASIC0.62□□□□□ -2.31
Trav8-1A0A075B641 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
Trav8-1A0A075B641 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
Trav8-1A0A075B641 AC164629.4-201ENSMUST00000218505 3247 ntBASIC0.62□□□□□ -2.31
Trav8-1A0A075B641 Gm22936-201ENSMUST00000103955 126 ntBASIC0.61□□□□□ -2.31
Trav8-1A0A075B641 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC0.61□□□□□ -2.31
Trav8-1A0A075B641 Gm12044-201ENSMUST00000120335 213 ntBASIC0.61□□□□□ -2.31
Trav8-1A0A075B641 Mup-ps15-201ENSMUST00000121741 539 ntBASIC0.61□□□□□ -2.31
Trav8-1A0A075B641 Gm13409-201ENSMUST00000122072 546 ntBASIC0.61□□□□□ -2.31
Trav8-1A0A075B641 Gm24632-201ENSMUST00000122770 323 ntBASIC0.61□□□□□ -2.31
Trav8-1A0A075B641 Gm23983-201ENSMUST00000157142 114 ntBASIC0.61□□□□□ -2.31
Trav8-1A0A075B641 Gm24419-201ENSMUST00000157875 332 ntBASIC0.61□□□□□ -2.31
Trav8-1A0A075B641 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
Trav8-1A0A075B641 Mir3473c-201ENSMUST00000175262 81 ntBASIC0.61□□□□□ -2.31
Trav8-1A0A075B641 Gm22111-201ENSMUST00000178010 79 ntBASIC0.61□□□□□ -2.31
Trav8-1A0A075B641 Gm23687-201ENSMUST00000178664 79 ntBASIC0.61□□□□□ -2.31
Trav8-1A0A075B641 Gm24566-201ENSMUST00000179286 79 ntBASIC0.61□□□□□ -2.31
Trav8-1A0A075B641 Gm23305-201ENSMUST00000179342 79 ntBASIC0.61□□□□□ -2.31
Trav8-1A0A075B641 Gm26389-201ENSMUST00000179819 79 ntBASIC0.61□□□□□ -2.31
Trav8-1A0A075B641 Gm22130-201ENSMUST00000179979 79 ntBASIC0.61□□□□□ -2.31
Trav8-1A0A075B641 Gm22393-201ENSMUST00000180153 79 ntBASIC0.61□□□□□ -2.31
Trav8-1A0A075B641 Gm25085-201ENSMUST00000180298 79 ntBASIC0.61□□□□□ -2.31
Trav8-1A0A075B641 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC0.61□□□□□ -2.31
Trav8-1A0A075B641 Gm44564-201ENSMUST00000207985 180 ntBASIC0.61□□□□□ -2.31
Trav8-1A0A075B641 Gm44754-201ENSMUST00000208155 400 ntBASIC0.61□□□□□ -2.31
Trav8-1A0A075B641 Gm44910-201ENSMUST00000208451 396 ntBASIC0.61□□□□□ -2.31
Trav8-1A0A075B641 Gm44666-201ENSMUST00000208544 391 ntBASIC0.61□□□□□ -2.31
Trav8-1A0A075B641 Gm45456-201ENSMUST00000210841 243 ntBASIC0.61□□□□□ -2.31
Trav8-1A0A075B641 CT025689.3-201ENSMUST00000223817 301 ntBASIC0.61□□□□□ -2.31
Trav8-1A0A075B641 Gm24252-201ENSMUST00000083700 132 ntBASIC0.61□□□□□ -2.31
Trav8-1A0A075B641 Gm25257-201ENSMUST00000083907 110 ntBASIC0.61□□□□□ -2.31
Trav8-1A0A075B641 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
Trav8-1A0A075B641 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC0.6□□□□□ -2.31
Trav8-1A0A075B641 Gm12417-201ENSMUST00000119153 403 ntBASIC0.6□□□□□ -2.31
Trav8-1A0A075B641 Gm15309-201ENSMUST00000121644 240 ntBASIC0.6□□□□□ -2.31
Trav8-1A0A075B641 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
Trav8-1A0A075B641 Gm25392-201ENSMUST00000157335 297 ntBASIC0.6□□□□□ -2.31
Trav8-1A0A075B641 Gm22731-201ENSMUST00000158086 94 ntBASIC0.6□□□□□ -2.31
Trav8-1A0A075B641 Gm20386-201ENSMUST00000174010 132 ntBASIC0.6□□□□□ -2.31
Trav8-1A0A075B641 Gm25243-201ENSMUST00000174912 207 ntBASIC0.6□□□□□ -2.31
Trav8-1A0A075B641 Gm6660-201ENSMUST00000179149 468 ntBASIC0.6□□□□□ -2.31
Trav8-1A0A075B641 Mir6419-201ENSMUST00000184784 113 ntBASIC0.6□□□□□ -2.31
Trav8-1A0A075B641 Gm28344-201ENSMUST00000185704 279 ntBASIC0.6□□□□□ -2.31
Trav8-1A0A075B641 Gm37568-201ENSMUST00000191755 364 ntBASIC0.6□□□□□ -2.31
Trav8-1A0A075B641 AC139186.1-201ENSMUST00000197610 94 ntBASIC0.6□□□□□ -2.31
Trav8-1A0A075B641 Gm45387-201ENSMUST00000209792 632 ntBASIC0.6□□□□□ -2.31
Trav8-1A0A075B641 AC130829.3-201ENSMUST00000222735 154 ntBASIC0.6□□□□□ -2.31
Trav8-1A0A075B641 AC154603.1-201ENSMUST00000224355 313 ntBASIC0.6□□□□□ -2.31
Trav8-1A0A075B641 Snora41-201ENSMUST00000082668 132 ntBASIC0.6□□□□□ -2.31
Trav8-1A0A075B641 Gm26265-201ENSMUST00000083277 135 ntBASIC0.6□□□□□ -2.31
Trav8-1A0A075B641 Gm25755-201ENSMUST00000083396 107 ntBASIC0.6□□□□□ -2.31
Trav8-1A0A075B641 Gm26175-201ENSMUST00000083794 131 ntBASIC0.6□□□□□ -2.31
Trav8-1A0A075B641 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
Trav8-1A0A075B641 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
Trav8-1A0A075B641 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
Trav8-1A0A075B641 Gm18360-201ENSMUST00000173327 1524 ntBASIC0.59□□□□□ -2.31
Trav8-1A0A075B641 Gm45872-201ENSMUST00000209804 1584 ntBASIC0.59□□□□□ -2.31
Trav8-1A0A075B641 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
Trav8-1A0A075B641 Gm14879-201ENSMUST00000117308 507 ntBASIC0.59□□□□□ -2.31
Trav8-1A0A075B641 Gm15162-201ENSMUST00000119325 283 ntBASIC0.59□□□□□ -2.31
Trav8-1A0A075B641 Gm12372-201ENSMUST00000121654 768 ntBASIC0.59□□□□□ -2.31
Trav8-1A0A075B641 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC0.59□□□□□ -2.31
Trav8-1A0A075B641 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC0.59□□□□□ -2.31
Trav8-1A0A075B641 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
Trav8-1A0A075B641 Gm37005-201ENSMUST00000193281 1164 ntBASIC0.59□□□□□ -2.31
Trav8-1A0A075B641 Gm38113-201ENSMUST00000193704 201 ntBASIC0.59□□□□□ -2.31
Trav8-1A0A075B641 Mir3068-202ENSMUST00000197755 79 ntBASIC0.59□□□□□ -2.31
Trav8-1A0A075B641 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC0.59□□□□□ -2.31
Trav8-1A0A075B641 AC126939.3-201ENSMUST00000226061 166 ntBASIC0.59□□□□□ -2.31
Trav8-1A0A075B641 Gm25079-201ENSMUST00000082529 203 ntBASIC0.59□□□□□ -2.31
Trav8-1A0A075B641 Gm26328-201ENSMUST00000082821 107 ntBASIC0.59□□□□□ -2.31
Trav8-1A0A075B641 Gm25794-201ENSMUST00000083286 107 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 102.5 ms