Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Mir3104-201ENSMUST00000174911 63 ntBASIC4.46□□□□□ -1.7
Prpf40aQ9R1C7 Mir6960-201ENSMUST00000183449 61 ntBASIC4.46□□□□□ -1.7
Prpf40aQ9R1C7 Gm27753-201ENSMUST00000184742 203 ntBASIC4.46□□□□□ -1.7
Prpf40aQ9R1C7 Gm29167-201ENSMUST00000190024 377 ntBASIC4.46□□□□□ -1.7
Prpf40aQ9R1C7 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC4.46□□□□□ -1.7
Prpf40aQ9R1C7 Gm44524-201ENSMUST00000203899 271 ntBASIC4.46□□□□□ -1.7
Prpf40aQ9R1C7 Gm19244-201ENSMUST00000204340 253 ntBASIC4.46□□□□□ -1.7
Prpf40aQ9R1C7 AC122242.1-201ENSMUST00000224650 304 ntBASIC4.46□□□□□ -1.7
Prpf40aQ9R1C7 AC133189.2-201ENSMUST00000228527 392 ntBASIC4.46□□□□□ -1.7
Prpf40aQ9R1C7 Mir34b-201ENSMUST00000083558 84 ntBASIC4.46□□□□□ -1.7
Prpf40aQ9R1C7 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Prpf40aQ9R1C7 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Prpf40aQ9R1C7 Gm37011-201ENSMUST00000195543 2935 ntBASIC4.46□□□□□ -1.7
Prpf40aQ9R1C7 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Prpf40aQ9R1C7 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Prpf40aQ9R1C7 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
Prpf40aQ9R1C7 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.45□□□□□ -1.7
Prpf40aQ9R1C7 AC124562.2-201ENSMUST00000223888 2313 ntBASIC4.45□□□□□ -1.7
Prpf40aQ9R1C7 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.45□□□□□ -1.7
Prpf40aQ9R1C7 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
Prpf40aQ9R1C7 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Prpf40aQ9R1C7 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Prpf40aQ9R1C7 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC4.45□□□□□ -1.7
Prpf40aQ9R1C7 Gm24716-201ENSMUST00000157524 104 ntBASIC4.45□□□□□ -1.7
Prpf40aQ9R1C7 Gm22211-201ENSMUST00000158097 156 ntBASIC4.45□□□□□ -1.7
Prpf40aQ9R1C7 Mir5134-201ENSMUST00000175529 78 ntBASIC4.45□□□□□ -1.7
Prpf40aQ9R1C7 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Prpf40aQ9R1C7 Gm27470-201ENSMUST00000184070 210 ntBASIC4.45□□□□□ -1.7
Prpf40aQ9R1C7 Mir6899-201ENSMUST00000184798 64 ntBASIC4.45□□□□□ -1.7
Prpf40aQ9R1C7 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC4.45□□□□□ -1.7
Prpf40aQ9R1C7 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Prpf40aQ9R1C7 Gm45543-201ENSMUST00000209327 88 ntBASIC4.45□□□□□ -1.7
Prpf40aQ9R1C7 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Prpf40aQ9R1C7 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Prpf40aQ9R1C7 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
Prpf40aQ9R1C7 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Prpf40aQ9R1C7 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Prpf40aQ9R1C7 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
Prpf40aQ9R1C7 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Prpf40aQ9R1C7 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Prpf40aQ9R1C7 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Prpf40aQ9R1C7 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
Prpf40aQ9R1C7 Snord66-201ENSMUST00000104051 75 ntBASIC4.44□□□□□ -1.7
Prpf40aQ9R1C7 Gm23481-201ENSMUST00000104173 131 ntBASIC4.44□□□□□ -1.7
Prpf40aQ9R1C7 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC4.44□□□□□ -1.7
Prpf40aQ9R1C7 Gm14518-201ENSMUST00000117351 542 ntBASIC4.44□□□□□ -1.7
Prpf40aQ9R1C7 Gm14020-201ENSMUST00000118165 662 ntBASIC4.44□□□□□ -1.7
Prpf40aQ9R1C7 Gm23642-201ENSMUST00000157858 258 ntBASIC4.44□□□□□ -1.7
Prpf40aQ9R1C7 Gm22789-201ENSMUST00000157884 130 ntBASIC4.44□□□□□ -1.7
Prpf40aQ9R1C7 Gm22516-201ENSMUST00000158266 124 ntBASIC4.44□□□□□ -1.7
Prpf40aQ9R1C7 Gm25369-201ENSMUST00000158848 132 ntBASIC4.44□□□□□ -1.7
Prpf40aQ9R1C7 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC4.44□□□□□ -1.7
Prpf40aQ9R1C7 Gm17067-202ENSMUST00000180131 123 ntBASIC4.44□□□□□ -1.7
Prpf40aQ9R1C7 Gm27695-201ENSMUST00000184301 91 ntBASIC4.44□□□□□ -1.7
Prpf40aQ9R1C7 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC4.44□□□□□ -1.7
Prpf40aQ9R1C7 Mir721-201ENSMUST00000200230 88 ntBASIC4.44□□□□□ -1.7
Prpf40aQ9R1C7 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC4.44□□□□□ -1.7
Prpf40aQ9R1C7 Gm45013-201ENSMUST00000206883 178 ntBASIC4.44□□□□□ -1.7
Prpf40aQ9R1C7 AC135292.1-201ENSMUST00000227665 204 ntBASIC4.44□□□□□ -1.7
Prpf40aQ9R1C7 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Prpf40aQ9R1C7 Gm23928-201ENSMUST00000082469 145 ntBASIC4.44□□□□□ -1.7
Prpf40aQ9R1C7 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Prpf40aQ9R1C7 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
Prpf40aQ9R1C7 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
Prpf40aQ9R1C7 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Prpf40aQ9R1C7 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Prpf40aQ9R1C7 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
Prpf40aQ9R1C7 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Prpf40aQ9R1C7 Gm8473-201ENSMUST00000176697 1885 ntBASIC4.43□□□□□ -1.7
Prpf40aQ9R1C7 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.43□□□□□ -1.7
Prpf40aQ9R1C7 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Prpf40aQ9R1C7 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Prpf40aQ9R1C7 Gm23063-201ENSMUST00000102350 93 ntBASIC4.43□□□□□ -1.7
Prpf40aQ9R1C7 Gm8666-201ENSMUST00000117517 292 ntBASIC4.43□□□□□ -1.7
Prpf40aQ9R1C7 Gm14748-201ENSMUST00000119819 411 ntBASIC4.43□□□□□ -1.7
Prpf40aQ9R1C7 Gm14215-201ENSMUST00000120578 221 ntBASIC4.43□□□□□ -1.7
Prpf40aQ9R1C7 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC4.43□□□□□ -1.7
Prpf40aQ9R1C7 Gm11281-201ENSMUST00000141391 576 ntBASIC4.43□□□□□ -1.7
Prpf40aQ9R1C7 Mir7074-201ENSMUST00000183884 63 ntBASIC4.43□□□□□ -1.7
Prpf40aQ9R1C7 Mir6975-201ENSMUST00000184879 61 ntBASIC4.43□□□□□ -1.7
Prpf40aQ9R1C7 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC4.43□□□□□ -1.7
Prpf40aQ9R1C7 Gm4644-201ENSMUST00000197587 400 ntBASIC4.43□□□□□ -1.7
Prpf40aQ9R1C7 Gm45317-201ENSMUST00000210385 223 ntBASIC4.43□□□□□ -1.7
Prpf40aQ9R1C7 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Prpf40aQ9R1C7 Gm43751-201ENSMUST00000200275 3071 ntBASIC4.43□□□□□ -1.7
Prpf40aQ9R1C7 Gm37645-201ENSMUST00000194285 3556 ntBASIC4.43□□□□□ -1.7
Prpf40aQ9R1C7 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Prpf40aQ9R1C7 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Prpf40aQ9R1C7 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Prpf40aQ9R1C7 Gm24015-201ENSMUST00000157725 232 ntBASIC4.42□□□□□ -1.7
Prpf40aQ9R1C7 Gm23554-201ENSMUST00000157818 110 ntBASIC4.42□□□□□ -1.7
Prpf40aQ9R1C7 Gm24131-201ENSMUST00000158539 107 ntBASIC4.42□□□□□ -1.7
Prpf40aQ9R1C7 Gm21827-201ENSMUST00000178247 423 ntBASIC4.42□□□□□ -1.7
Prpf40aQ9R1C7 Gm27834-201ENSMUST00000183427 125 ntBASIC4.42□□□□□ -1.7
Prpf40aQ9R1C7 Gm27271-201ENSMUST00000183509 170 ntBASIC4.42□□□□□ -1.7
Prpf40aQ9R1C7 Gm29574-201ENSMUST00000186226 696 ntBASIC4.42□□□□□ -1.7
Prpf40aQ9R1C7 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC4.42□□□□□ -1.7
Prpf40aQ9R1C7 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC4.42□□□□□ -1.7
Prpf40aQ9R1C7 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.42□□□□□ -1.7
Prpf40aQ9R1C7 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms