Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Nkx6-1Q99MA9 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.7□□□□□ -1.82
Nkx6-1Q99MA9 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.7□□□□□ -1.82
Nkx6-1Q99MA9 CT010511.1-201ENSMUST00000224570 315 ntBASIC3.7□□□□□ -1.82
Nkx6-1Q99MA9 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Nkx6-1Q99MA9 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Nkx6-1Q99MA9 Mir208a-201ENSMUST00000083498 83 ntBASIC3.7□□□□□ -1.82
Nkx6-1Q99MA9 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
Nkx6-1Q99MA9 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Nkx6-1Q99MA9 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Nkx6-1Q99MA9 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Nkx6-1Q99MA9 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Nkx6-1Q99MA9 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
Nkx6-1Q99MA9 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Nkx6-1Q99MA9 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Nkx6-1Q99MA9 Mdga2-203ENSMUST00000113942 423 ntBASIC3.69□□□□□ -1.82
Nkx6-1Q99MA9 Gm12512-201ENSMUST00000119620 217 ntBASIC3.69□□□□□ -1.82
Nkx6-1Q99MA9 Gm25107-201ENSMUST00000122472 129 ntBASIC3.69□□□□□ -1.82
Nkx6-1Q99MA9 Gm25805-201ENSMUST00000122788 108 ntBASIC3.69□□□□□ -1.82
Nkx6-1Q99MA9 Gm23331-201ENSMUST00000157423 108 ntBASIC3.69□□□□□ -1.82
Nkx6-1Q99MA9 Mir1934-201ENSMUST00000158127 83 ntBASIC3.69□□□□□ -1.82
Nkx6-1Q99MA9 Gm24739-201ENSMUST00000158855 292 ntBASIC3.69□□□□□ -1.82
Nkx6-1Q99MA9 Mir6371-201ENSMUST00000184470 111 ntBASIC3.69□□□□□ -1.82
Nkx6-1Q99MA9 Gm28825-201ENSMUST00000186233 238 ntBASIC3.69□□□□□ -1.82
Nkx6-1Q99MA9 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC3.69□□□□□ -1.82
Nkx6-1Q99MA9 Gm23370-202ENSMUST00000197008 129 ntBASIC3.69□□□□□ -1.82
Nkx6-1Q99MA9 Gm44521-201ENSMUST00000206469 217 ntBASIC3.69□□□□□ -1.82
Nkx6-1Q99MA9 Gm44824-201ENSMUST00000207021 229 ntBASIC3.69□□□□□ -1.82
Nkx6-1Q99MA9 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC3.69□□□□□ -1.82
Nkx6-1Q99MA9 Gm19790-201ENSMUST00000214414 251 ntBASIC3.69□□□□□ -1.82
Nkx6-1Q99MA9 Gm25930-201ENSMUST00000082785 107 ntBASIC3.69□□□□□ -1.82
Nkx6-1Q99MA9 Mir28a-201ENSMUST00000083560 86 ntBASIC3.69□□□□□ -1.82
Nkx6-1Q99MA9 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Nkx6-1Q99MA9 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC3.69□□□□□ -1.82
Nkx6-1Q99MA9 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.69□□□□□ -1.82
Nkx6-1Q99MA9 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Nkx6-1Q99MA9 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Nkx6-1Q99MA9 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC3.68□□□□□ -1.82
Nkx6-1Q99MA9 Gm13432-201ENSMUST00000118861 241 ntBASIC3.68□□□□□ -1.82
Nkx6-1Q99MA9 Gm12934-201ENSMUST00000119221 343 ntBASIC3.68□□□□□ -1.82
Nkx6-1Q99MA9 Gm5396-201ENSMUST00000121222 532 ntBASIC3.68□□□□□ -1.82
Nkx6-1Q99MA9 Gm17052-201ENSMUST00000165496 289 ntBASIC3.68□□□□□ -1.82
Nkx6-1Q99MA9 Mir6993-201ENSMUST00000184912 65 ntBASIC3.68□□□□□ -1.82
Nkx6-1Q99MA9 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Nkx6-1Q99MA9 Gm43586-201ENSMUST00000195948 310 ntBASIC3.68□□□□□ -1.82
Nkx6-1Q99MA9 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.68□□□□□ -1.82
Nkx6-1Q99MA9 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.68□□□□□ -1.82
Nkx6-1Q99MA9 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.68□□□□□ -1.82
Nkx6-1Q99MA9 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Nkx6-1Q99MA9 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC3.68□□□□□ -1.82
Nkx6-1Q99MA9 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Nkx6-1Q99MA9 Gm42447-201ENSMUST00000200102 2903 ntBASIC3.67□□□□□ -1.82
Nkx6-1Q99MA9 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Nkx6-1Q99MA9 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Nkx6-1Q99MA9 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Nkx6-1Q99MA9 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC3.67□□□□□ -1.82
Nkx6-1Q99MA9 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Nkx6-1Q99MA9 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.67□□□□□ -1.82
Nkx6-1Q99MA9 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.67□□□□□ -1.82
Nkx6-1Q99MA9 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Nkx6-1Q99MA9 Gm13478-201ENSMUST00000118312 413 ntBASIC3.67□□□□□ -1.82
Nkx6-1Q99MA9 Gm16032-201ENSMUST00000118534 168 ntBASIC3.67□□□□□ -1.82
Nkx6-1Q99MA9 Gm11566-201ENSMUST00000118550 203 ntBASIC3.67□□□□□ -1.82
Nkx6-1Q99MA9 Gm25115-201ENSMUST00000157187 140 ntBASIC3.67□□□□□ -1.82
Nkx6-1Q99MA9 Gm23702-201ENSMUST00000158840 130 ntBASIC3.67□□□□□ -1.82
Nkx6-1Q99MA9 Gm25835-201ENSMUST00000158917 144 ntBASIC3.67□□□□□ -1.82
Nkx6-1Q99MA9 Gm29022-201ENSMUST00000190702 225 ntBASIC3.67□□□□□ -1.82
Nkx6-1Q99MA9 Igkv13-76-201ENSMUST00000197621 347 ntBASIC3.67□□□□□ -1.82
Nkx6-1Q99MA9 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC3.67□□□□□ -1.82
Nkx6-1Q99MA9 Gm17887-201ENSMUST00000200194 547 ntBASIC3.67□□□□□ -1.82
Nkx6-1Q99MA9 Gm44355-201ENSMUST00000200417 104 ntBASIC3.67□□□□□ -1.82
Nkx6-1Q99MA9 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC3.67□□□□□ -1.82
Nkx6-1Q99MA9 Gm24356-201ENSMUST00000082859 106 ntBASIC3.67□□□□□ -1.82
Nkx6-1Q99MA9 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Nkx6-1Q99MA9 AC156025.1-201ENSMUST00000223597 3551 ntBASIC3.67□□□□□ -1.82
Nkx6-1Q99MA9 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.67□□□□□ -1.82
Nkx6-1Q99MA9 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
Nkx6-1Q99MA9 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Nkx6-1Q99MA9 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.67□□□□□ -1.82
Nkx6-1Q99MA9 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Nkx6-1Q99MA9 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.67□□□□□ -1.82
Nkx6-1Q99MA9 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Nkx6-1Q99MA9 Gm8935-202ENSMUST00000105727 1959 ntBASIC3.67□□□□□ -1.82
Nkx6-1Q99MA9 AC152162.1-201ENSMUST00000225910 2917 ntBASIC3.67□□□□□ -1.82
Nkx6-1Q99MA9 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC3.67□□□□□ -1.82
Nkx6-1Q99MA9 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Nkx6-1Q99MA9 AC167360.1-201ENSMUST00000222596 2494 ntBASIC3.66□□□□□ -1.82
Nkx6-1Q99MA9 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.66□□□□□ -1.82
Nkx6-1Q99MA9 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.66□□□□□ -1.82
Nkx6-1Q99MA9 Gm14518-201ENSMUST00000117351 542 ntBASIC3.66□□□□□ -1.82
Nkx6-1Q99MA9 Gm3788-201ENSMUST00000119949 136 ntBASIC3.66□□□□□ -1.82
Nkx6-1Q99MA9 Gm14922-201ENSMUST00000121131 163 ntBASIC3.66□□□□□ -1.82
Nkx6-1Q99MA9 Gm22516-201ENSMUST00000158266 124 ntBASIC3.66□□□□□ -1.82
Nkx6-1Q99MA9 Gm16289-201ENSMUST00000162079 183 ntBASIC3.66□□□□□ -1.82
Nkx6-1Q99MA9 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC3.66□□□□□ -1.82
Nkx6-1Q99MA9 Gm27476-201ENSMUST00000183366 104 ntBASIC3.66□□□□□ -1.82
Nkx6-1Q99MA9 Gm28591-201ENSMUST00000185259 183 ntBASIC3.66□□□□□ -1.82
Nkx6-1Q99MA9 Gm28627-201ENSMUST00000186141 453 ntBASIC3.66□□□□□ -1.82
Nkx6-1Q99MA9 Gm6105-201ENSMUST00000200580 624 ntBASIC3.66□□□□□ -1.82
Nkx6-1Q99MA9 Gm45080-201ENSMUST00000206648 283 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms