Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Mir28b-201ENSMUST00000175399 80 ntBASIC1.04□□□□□ -2.24
Nup35Q8R4R6 Gm26177-201ENSMUST00000178683 107 ntBASIC1.04□□□□□ -2.24
Nup35Q8R4R6 Gm27711-201ENSMUST00000183802 118 ntBASIC1.04□□□□□ -2.24
Nup35Q8R4R6 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC1.04□□□□□ -2.24
Nup35Q8R4R6 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
Nup35Q8R4R6 Gm45207-201ENSMUST00000207469 145 ntBASIC1.04□□□□□ -2.24
Nup35Q8R4R6 Gm44564-201ENSMUST00000207985 180 ntBASIC1.04□□□□□ -2.24
Nup35Q8R4R6 Gm44554-201ENSMUST00000208738 147 ntBASIC1.04□□□□□ -2.24
Nup35Q8R4R6 Gm9068-201ENSMUST00000217393 455 ntBASIC1.04□□□□□ -2.24
Nup35Q8R4R6 Gm46994-201ENSMUST00000221523 219 ntBASIC1.04□□□□□ -2.24
Nup35Q8R4R6 Gm5955-201ENSMUST00000222712 219 ntBASIC1.04□□□□□ -2.24
Nup35Q8R4R6 AC133517.1-203ENSMUST00000225570 390 ntBASIC1.04□□□□□ -2.24
Nup35Q8R4R6 Ear14-201ENSMUST00000049559 468 ntBASIC1.04□□□□□ -2.24
Nup35Q8R4R6 Gm23645-201ENSMUST00000083228 108 ntBASIC1.04□□□□□ -2.24
Nup35Q8R4R6 Gm24610-201ENSMUST00000083270 109 ntBASIC1.04□□□□□ -2.24
Nup35Q8R4R6 Gm10780-201ENSMUST00000099459 285 ntBASIC1.04□□□□□ -2.24
Nup35Q8R4R6 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.04□□□□□ -2.24
Nup35Q8R4R6 Gm14530-201ENSMUST00000122391 333 ntBASIC1.03□□□□□ -2.24
Nup35Q8R4R6 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.03□□□□□ -2.24
Nup35Q8R4R6 Gm22803-201ENSMUST00000158049 283 ntBASIC1.03□□□□□ -2.24
Nup35Q8R4R6 Gm21978-201ENSMUST00000179696 377 ntBASIC1.03□□□□□ -2.24
Nup35Q8R4R6 Mir7683-201ENSMUST00000183842 61 ntBASIC1.03□□□□□ -2.24
Nup35Q8R4R6 Gm37578-201ENSMUST00000192256 1177 ntBASIC1.03□□□□□ -2.24
Nup35Q8R4R6 Mir3068-202ENSMUST00000197755 79 ntBASIC1.03□□□□□ -2.24
Nup35Q8R4R6 Gm43512-201ENSMUST00000198495 176 ntBASIC1.03□□□□□ -2.24
Nup35Q8R4R6 Gm42960-201ENSMUST00000202160 241 ntBASIC1.03□□□□□ -2.24
Nup35Q8R4R6 Gm45150-201ENSMUST00000206051 467 ntBASIC1.03□□□□□ -2.24
Nup35Q8R4R6 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
Nup35Q8R4R6 Gm7692-201ENSMUST00000213534 409 ntBASIC1.03□□□□□ -2.24
Nup35Q8R4R6 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.03□□□□□ -2.24
Nup35Q8R4R6 AC160930.1-201ENSMUST00000227194 337 ntBASIC1.03□□□□□ -2.24
Nup35Q8R4R6 AC125464.1-201ENSMUST00000228013 512 ntBASIC1.03□□□□□ -2.24
Nup35Q8R4R6 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
Nup35Q8R4R6 Gm26328-201ENSMUST00000082821 107 ntBASIC1.03□□□□□ -2.24
Nup35Q8R4R6 Gm26265-201ENSMUST00000083277 135 ntBASIC1.03□□□□□ -2.24
Nup35Q8R4R6 Gm25794-201ENSMUST00000083286 107 ntBASIC1.03□□□□□ -2.24
Nup35Q8R4R6 Gm22723-201ENSMUST00000083820 129 ntBASIC1.03□□□□□ -2.24
Nup35Q8R4R6 Gm25313-201ENSMUST00000101817 116 ntBASIC1.02□□□□□ -2.25
Nup35Q8R4R6 Gm23202-201ENSMUST00000104376 129 ntBASIC1.02□□□□□ -2.25
Nup35Q8R4R6 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Nup35Q8R4R6 Gm15452-201ENSMUST00000119877 240 ntBASIC1.02□□□□□ -2.25
Nup35Q8R4R6 Gm23956-201ENSMUST00000157211 119 ntBASIC1.02□□□□□ -2.25
Nup35Q8R4R6 Gm23122-201ENSMUST00000157645 103 ntBASIC1.02□□□□□ -2.25
Nup35Q8R4R6 Gm22485-201ENSMUST00000157990 109 ntBASIC1.02□□□□□ -2.25
Nup35Q8R4R6 Gm24573-201ENSMUST00000175499 112 ntBASIC1.02□□□□□ -2.25
Nup35Q8R4R6 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.02□□□□□ -2.25
Nup35Q8R4R6 Gm25020-201ENSMUST00000178071 107 ntBASIC1.02□□□□□ -2.25
Nup35Q8R4R6 Gm23287-201ENSMUST00000179427 116 ntBASIC1.02□□□□□ -2.25
Nup35Q8R4R6 Gm23143-201ENSMUST00000180137 116 ntBASIC1.02□□□□□ -2.25
Nup35Q8R4R6 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
Nup35Q8R4R6 Mir6335-201ENSMUST00000184081 98 ntBASIC1.02□□□□□ -2.25
Nup35Q8R4R6 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC1.02□□□□□ -2.25
Nup35Q8R4R6 Gm44483-201ENSMUST00000197203 97 ntBASIC1.02□□□□□ -2.25
Nup35Q8R4R6 Trdv3-201ENSMUST00000198551 309 ntBASIC1.02□□□□□ -2.25
Nup35Q8R4R6 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC1.02□□□□□ -2.25
Nup35Q8R4R6 Gm9377-201ENSMUST00000207227 623 ntBASIC1.02□□□□□ -2.25
Nup35Q8R4R6 Gm45387-201ENSMUST00000209792 632 ntBASIC1.02□□□□□ -2.25
Nup35Q8R4R6 Gm18488-201ENSMUST00000215082 364 ntBASIC1.02□□□□□ -2.25
Nup35Q8R4R6 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.02□□□□□ -2.25
Nup35Q8R4R6 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
Nup35Q8R4R6 Gm22997-201ENSMUST00000082845 107 ntBASIC1.02□□□□□ -2.25
Nup35Q8R4R6 Gm24871-201ENSMUST00000083099 116 ntBASIC1.02□□□□□ -2.25
Nup35Q8R4R6 Gm25409-201ENSMUST00000083764 131 ntBASIC1.02□□□□□ -2.25
Nup35Q8R4R6 Rnu5g-201ENSMUST00000093721 116 ntBASIC1.02□□□□□ -2.25
Nup35Q8R4R6 Gm16261-201ENSMUST00000096813 205 ntBASIC1.02□□□□□ -2.25
Nup35Q8R4R6 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
Nup35Q8R4R6 Gm25068-201ENSMUST00000103895 110 ntBASIC1.01□□□□□ -2.25
Nup35Q8R4R6 Gm22338-201ENSMUST00000157715 129 ntBASIC1.01□□□□□ -2.25
Nup35Q8R4R6 Gm25836-201ENSMUST00000158918 123 ntBASIC1.01□□□□□ -2.25
Nup35Q8R4R6 Gm20477-201ENSMUST00000174028 280 ntBASIC1.01□□□□□ -2.25
Nup35Q8R4R6 Mir6406-201ENSMUST00000183592 120 ntBASIC1.01□□□□□ -2.25
Nup35Q8R4R6 Gm27428-201ENSMUST00000184289 110 ntBASIC1.01□□□□□ -2.25
Nup35Q8R4R6 Gm43723-201ENSMUST00000196886 189 ntBASIC1.01□□□□□ -2.25
Nup35Q8R4R6 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC1.01□□□□□ -2.25
Nup35Q8R4R6 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC1.01□□□□□ -2.25
Nup35Q8R4R6 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.01□□□□□ -2.25
Nup35Q8R4R6 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.01□□□□□ -2.25
Nup35Q8R4R6 Gm22299-201ENSMUST00000082663 136 ntBASIC1.01□□□□□ -2.25
Nup35Q8R4R6 Gm5670-201ENSMUST00000093546 372 ntBASIC1.01□□□□□ -2.25
Nup35Q8R4R6 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
Nup35Q8R4R6 Gm25759-201ENSMUST00000103988 129 ntBASIC1□□□□□ -2.25
Nup35Q8R4R6 Gm23950-201ENSMUST00000104026 129 ntBASIC1□□□□□ -2.25
Nup35Q8R4R6 Gm14852-201ENSMUST00000120065 647 ntBASIC1□□□□□ -2.25
Nup35Q8R4R6 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1□□□□□ -2.25
Nup35Q8R4R6 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1□□□□□ -2.25
Nup35Q8R4R6 Gm6182-201ENSMUST00000156439 1208 ntBASIC1□□□□□ -2.25
Nup35Q8R4R6 Gm23983-201ENSMUST00000157142 114 ntBASIC1□□□□□ -2.25
Nup35Q8R4R6 Gm24419-201ENSMUST00000157875 332 ntBASIC1□□□□□ -2.25
Nup35Q8R4R6 Gm24394-201ENSMUST00000158141 123 ntBASIC1□□□□□ -2.25
Nup35Q8R4R6 Gm22389-201ENSMUST00000158193 301 ntBASIC1□□□□□ -2.25
Nup35Q8R4R6 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
Nup35Q8R4R6 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC1□□□□□ -2.25
Nup35Q8R4R6 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC1□□□□□ -2.25
Nup35Q8R4R6 Gm38044-201ENSMUST00000192964 487 ntBASIC1□□□□□ -2.25
Nup35Q8R4R6 Mir1291-201ENSMUST00000199842 117 ntBASIC1□□□□□ -2.25
Nup35Q8R4R6 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC1□□□□□ -2.25
Nup35Q8R4R6 Gm45654-201ENSMUST00000210980 123 ntBASIC1□□□□□ -2.25
Nup35Q8R4R6 Gm18774-201ENSMUST00000218269 601 ntBASIC1□□□□□ -2.25
Nup35Q8R4R6 Gm21937-201ENSMUST00000222825 218 ntBASIC1□□□□□ -2.25
Nup35Q8R4R6 AC166830.2-201ENSMUST00000225821 196 ntBASIC1□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 150.9 ms