Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Trim35Q8C006 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Trim35Q8C006 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Trim35Q8C006 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Trim35Q8C006 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
Trim35Q8C006 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Trim35Q8C006 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC5.28□□□□□ -1.56
Trim35Q8C006 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Trim35Q8C006 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Trim35Q8C006 Gm26420-201ENSMUST00000104273 103 ntBASIC5.28□□□□□ -1.56
Trim35Q8C006 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim35Q8C006 Gm24295-201ENSMUST00000158298 131 ntBASIC5.28□□□□□ -1.56
Trim35Q8C006 Gm22411-201ENSMUST00000175462 126 ntBASIC5.28□□□□□ -1.56
Trim35Q8C006 Gm22002-201ENSMUST00000175622 125 ntBASIC5.28□□□□□ -1.56
Trim35Q8C006 Gm22420-201ENSMUST00000178795 126 ntBASIC5.28□□□□□ -1.56
Trim35Q8C006 Gm23860-201ENSMUST00000179446 132 ntBASIC5.28□□□□□ -1.56
Trim35Q8C006 Gm28017-201ENSMUST00000183434 126 ntBASIC5.28□□□□□ -1.56
Trim35Q8C006 Gm27975-201ENSMUST00000184400 101 ntBASIC5.28□□□□□ -1.56
Trim35Q8C006 Gm18429-201ENSMUST00000198707 421 ntBASIC5.28□□□□□ -1.56
Trim35Q8C006 AC125350.4-201ENSMUST00000225895 273 ntBASIC5.28□□□□□ -1.56
Trim35Q8C006 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim35Q8C006 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim35Q8C006 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Trim35Q8C006 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim35Q8C006 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Trim35Q8C006 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Trim35Q8C006 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Trim35Q8C006 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Trim35Q8C006 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
Trim35Q8C006 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim35Q8C006 Gm25417-201ENSMUST00000104212 131 ntBASIC5.27□□□□□ -1.57
Trim35Q8C006 Gm13537-201ENSMUST00000120467 267 ntBASIC5.27□□□□□ -1.57
Trim35Q8C006 Gm25824-201ENSMUST00000157092 121 ntBASIC5.27□□□□□ -1.57
Trim35Q8C006 Gm27639-201ENSMUST00000184937 85 ntBASIC5.27□□□□□ -1.57
Trim35Q8C006 Mir6516-201ENSMUST00000196236 110 ntBASIC5.27□□□□□ -1.57
Trim35Q8C006 AC122465.2-201ENSMUST00000221774 354 ntBASIC5.27□□□□□ -1.57
Trim35Q8C006 AL590503.1-201ENSMUST00000222053 321 ntBASIC5.27□□□□□ -1.57
Trim35Q8C006 Mir337-201ENSMUST00000083592 97 ntBASIC5.27□□□□□ -1.57
Trim35Q8C006 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.27□□□□□ -1.57
Trim35Q8C006 Gm38083-201ENSMUST00000194758 3498 ntBASIC5.27□□□□□ -1.57
Trim35Q8C006 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim35Q8C006 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Trim35Q8C006 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim35Q8C006 Gm43887-201ENSMUST00000204727 3186 ntBASIC5.26□□□□□ -1.57
Trim35Q8C006 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC5.26□□□□□ -1.57
Trim35Q8C006 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Trim35Q8C006 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm25758-201ENSMUST00000103987 129 ntBASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm22273-201ENSMUST00000104040 132 ntBASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm13885-201ENSMUST00000117569 187 ntBASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm14874-201ENSMUST00000118995 438 ntBASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm14601-201ENSMUST00000120892 236 ntBASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm23855-201ENSMUST00000158377 135 ntBASIC5.26□□□□□ -1.57
Trim35Q8C006 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm24388-201ENSMUST00000177872 107 ntBASIC5.26□□□□□ -1.57
Trim35Q8C006 Mir7087-201ENSMUST00000184840 70 ntBASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm21428-201ENSMUST00000186550 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm29370-201ENSMUST00000186581 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm21633-202ENSMUST00000186630 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm28890-201ENSMUST00000186686 173 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm28092-201ENSMUST00000186709 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim35Q8C006 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms